Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_A07
         (576 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    52   3e-09
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    45   4e-07
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   0.46 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   0.46 
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        24   0.81 
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           24   1.1  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   1.9  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    23   1.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.3  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   5.7  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   9.9  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   9.9  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 52.4 bits (120), Expect = 3e-09
 Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
 Frame = +2

Query: 65  VRQPRLNHKPFS--VTIDVKSDIATDAVIKIFLGPKYNDNGFPITLEENWHKFYELDWFT 238
           VR   L H+PF+  +T++ +S+       +IFL PK ++ G P    +    F ELD FT
Sbjct: 472 VRFTHLQHQPFTYKITVNNQSNGNRKGTCRIFLAPKTDERGNPWLFRDQKIMFIELDKFT 531

Query: 239 HKITPGQNKIVRNSNEFSLFKEDSLPLTDLMKLLDEGKVPLYMSEGFEC-MPNRLMLPRG 415
             +  GQN I R S++ S+         +L     +G   L       C  P  +++P+G
Sbjct: 532 VNLKQGQNTITRASSQSSVTIPFERTFRNLDLNRPQGGEELAQFNFCGCGWPQHMLIPKG 591

Query: 416 T 418
           T
Sbjct: 592 T 592


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 45.2 bits (102), Expect = 4e-07
 Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
 Frame = +2

Query: 65  VRQPRLNHKPFSVTIDVK-SDIATDAVIKIFLGPKYNDNGFPITLEENWHKFYELDWFTH 241
           VR   L ++ F+  I V  S        +IFL P++++ G P         F ELD F  
Sbjct: 472 VRFTHLQNQDFTYKITVNNSGNNRMGTCRIFLAPQFDERGNPWLFRNQKDMFIELDRFAV 531

Query: 242 KITPGQNKIVRNSNEFSLFKEDSLPLTDLMKLLDEGKVP--LYMSEGFEC---MPNRLML 406
            +  G N I R+S E SL    ++P     + LD  +      +SE   C    P  ++L
Sbjct: 532 SLKQGTNTITRHSTESSL----TIPFERTFRNLDANRPTGGDALSEFNFCGCGWPQHMLL 587

Query: 407 PRGTE 421
           P+GTE
Sbjct: 588 PKGTE 592


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +2

Query: 62  KVRQPRLNHKPFSVTIDVKSDIATDAVIKIFLGPKYN 172
           K   P LNHKP ++TI  K  IA  A   I + PK N
Sbjct: 255 KQELPDLNHKPLNLTIK-KMPIAIVAPFTI-VEPKLN 289



 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 482 LTPFEAFVIDYKPFGYPFDRP 544
           LTP EAF +   P  +P  +P
Sbjct: 725 LTPHEAFDVKLPPPPHPHHQP 745


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +2

Query: 62  KVRQPRLNHKPFSVTIDVKSDIATDAVIKIFLGPKYN 172
           K   P LNHKP ++TI  K  IA  A   I + PK N
Sbjct: 147 KQELPDLNHKPLNLTIK-KMPIAIVAPFTI-VEPKLN 181



 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 482 LTPFEAFVIDYKPFGYPFDRP 544
           LTP EAF +   P  +P  +P
Sbjct: 617 LTPHEAFDVKLPPPPHPHHQP 637


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 24.2 bits (50), Expect = 0.81
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +3

Query: 423 VDIHSSSLFSYIRLNLVAMI*HHLRPLLLITSLLAIHSTVQR 548
           V I+   L ++IRL +V M  + +RP ++   L   H  V +
Sbjct: 48  VFINGRPLPNHIRLKIVEMAANGIRPCVISRQLRVSHGCVSK 89


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +2

Query: 8   NSVFLTKKEIKTSYPHNFKVRQPRLNHKPFSVTIDVKSD 124
           N ++ + KE        F + QP LNH   SVT  V  D
Sbjct: 43  NEMYHSVKEEPIYESCRFSINQPYLNHFDNSVTPMVNHD 81


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +2

Query: 8   NSVFLTKKEIKTSYPHNFKVRQPRLNHKPFSVTIDVKSD 124
           N ++   KE        F + QP LNH   SVT  V  D
Sbjct: 43  NEMYHRVKEEPIYESCRFSINQPYLNHFDNSVTPMVNHD 81


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +2

Query: 8   NSVFLTKKEIKTSYPHNFKVRQPRLNHKPFSVTIDVKSD 124
           N ++   KE        F + QP LNH   SVT  V  D
Sbjct: 43  NEMYHRVKEEPIYESCRFSINQPYLNHFDNSVTPMVNHD 81


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 32   LFWSRIHC*W 3
            LFW++ HC W
Sbjct: 2269 LFWNKDHCDW 2278


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -1

Query: 465 SNGYTKTKNWNGYPPSVPLGNI 400
           SNGY+   +   Y P  P G I
Sbjct: 132 SNGYSSPMSSGSYDPYSPNGKI 153


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 308 SLPLTDLMKLLDEG 349
           SLPLTD ++LL  G
Sbjct: 237 SLPLTDQVQLLRAG 250


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 49  PTQLQGSSTTTQPQA 93
           PT LQ  +T T P A
Sbjct: 83  PTHLQSPNTQTHPSA 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,288
Number of Sequences: 336
Number of extensions: 2925
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)