Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_A07
(576 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132860-13|CAB60509.1| 292|Caenorhabditis elegans Hypothetical... 29 1.8
Z66519-3|CAA91372.1| 634|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z66519-2|CAA91381.1| 634|Caenorhabditis elegans Hypothetical pr... 29 3.1
U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical pr... 29 3.1
U49830-12|AAL16311.1| 363|Caenorhabditis elegans Hypothetical p... 29 3.1
AL117204-16|CAB55130.1| 389|Caenorhabditis elegans Hypothetical... 29 3.1
Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF040661-3|AAG24226.1| 187|Caenorhabditis elegans Hypothetical ... 28 5.5
AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical ... 28 5.5
U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily ass... 27 7.2
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 27 7.2
U53146-1|AAA96111.1| 348|Caenorhabditis elegans Hypothetical pr... 27 9.5
AC087081-18|AAK66030.1| 124|Caenorhabditis elegans Hypothetical... 27 9.5
AC024696-1|AAK84516.1| 348|Caenorhabditis elegans Hypothetical ... 27 9.5
>AL132860-13|CAB60509.1| 292|Caenorhabditis elegans Hypothetical
protein Y56A3A.15 protein.
Length = 292
Score = 29.5 bits (63), Expect = 1.8
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Frame = +2
Query: 89 KPFSVTIDVKSDIATDAVIKIFLGPKYNDNGF---PITLEENWHKFYELDWFTHKITPGQ 259
K F V I S+I + ++++F P ++ G PI + H FY L++F K+T
Sbjct: 143 KTFGVKI-ASSEIQSSHLLELF--PSLSNLGVYNVPINTQILTHNFYWLEFFKTKVTL-D 198
Query: 260 NKIVRNSNEFSLFKEDSLPLTDL 328
+ +V N ++FS+ + ++LP +L
Sbjct: 199 DILVSNCSKFSI-EYNNLPDKEL 220
>Z66519-3|CAA91372.1| 634|Caenorhabditis elegans Hypothetical
protein B0334.3b protein.
Length = 634
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -3
Query: 541 TVEWIAKRLVINNKGLKWCQIMATRFKRIYENKELEWIST 422
T++ K LVI KG W + AT+ ++ +L W++T
Sbjct: 267 TLKSAKKPLVIVGKGAAWSERGATQVQQFLTKSKLPWLAT 306
>Z66519-2|CAA91381.1| 634|Caenorhabditis elegans Hypothetical
protein B0334.3a protein.
Length = 634
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -3
Query: 541 TVEWIAKRLVINNKGLKWCQIMATRFKRIYENKELEWIST 422
T++ K LVI KG W + AT+ ++ +L W++T
Sbjct: 267 TLKSAKKPLVIVGKGAAWSERGATQVQQFLTKSKLPWLAT 306
>U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical
protein C46A5.4 protein.
Length = 1432
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +2
Query: 56 NFKVRQPRLNHKPFSVTIDVKSDIATDAVIKIFLGPKYNDNGFPITLEENWHKFYELDWF 235
N + +P L+ P T K DIA I + D+G P L+ W F +LD F
Sbjct: 452 NAPIEKPGLHSSPLLRTAFQKKDIADSVDIIAMVIQMGRDHGLPSYLQ--WRTFCKLDDF 509
Query: 236 T 238
+
Sbjct: 510 S 510
>U49830-12|AAL16311.1| 363|Caenorhabditis elegans Hypothetical
protein C33F10.13 protein.
Length = 363
Score = 28.7 bits (61), Expect = 3.1
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = +2
Query: 77 RLNHKPFSVTIDVKSDIATDAVIKIFLG-PKYNDNGFP--ITLEENWHKFYELDWFTHKI 247
R N +SV D K D A+ + L P ++ P ++L E ++ +F+ K+
Sbjct: 156 RHNFDFYSVFTDFK-DFEIGAIRRCSLSCPPFSSQSLPDLLSLTEQISFNFDSSYFS-KL 213
Query: 248 TPGQNKIVRNSNEFSLFKEDSLPLTDLMKL 337
+ + +N + SL EDS+PLTDL+ L
Sbjct: 214 EKFKEIVSKNLSYLSL--EDSIPLTDLLIL 241
>AL117204-16|CAB55130.1| 389|Caenorhabditis elegans Hypothetical
protein Y116A8C.25 protein.
Length = 389
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +2
Query: 197 EENWHKFYELDWFTHKITPGQNKIVRNSNEFSLFKEDSLPLTDLMKLL 340
E +W + +E + H++ P ++++ N+ LF+ + T KLL
Sbjct: 150 ENDWTETWEEFFIRHRLKPQIDRLIETHNDRQLFELSEILYTKTAKLL 197
>Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical
protein T01H10.7 protein.
Length = 399
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/40 (27%), Positives = 24/40 (60%)
Frame = -2
Query: 455 IRKQRTGMDIHLQYLLATSIYLACIQNLQTYTTELFLRLI 336
+RK ++ M+ L+Y+L + C+ L+ + T +F+ +I
Sbjct: 353 LRKNKSKMNQKLEYVLGEPLETICMVILEIFNTAIFMVMI 392
>AF040661-3|AAG24226.1| 187|Caenorhabditis elegans Hypothetical
protein W10G11.1 protein.
Length = 187
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 474 LLDSNGYTKTKNWNGYPPSVP 412
LLD+ +KNWN YP +P
Sbjct: 109 LLDARASECSKNWNPYPKEIP 129
>AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical
protein K10B4.1 protein.
Length = 1210
Score = 27.9 bits (59), Expect = 5.5
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Frame = +2
Query: 125 IATDAVIKIFLGPKYNDNGFPITLEENWHKFYELDWFTHKITPGQNKIVRNSNEFSLF-- 298
IA + V LGP + G + L+ KF + W+T+K+T Q + V+ ++ ++
Sbjct: 452 IAENPVYGSLLGPTF---GCIMALQFQKTKFGDTYWYTNKLTEDQLEEVKKTSISAMMCR 508
Query: 299 -KEDSLPLTDLMKLLDE-GKVPLYMSEGFECMPN 394
++ S+ D+ K D +P++ + P+
Sbjct: 509 HQKTSIIQKDVFKAADNFQNIPIFCNSSVFAKPD 542
>U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform b protein.
Length = 4034
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 165 LGPKKILITASVAISDLTSMVTLKGLWLSRG*RTLK 58
+G TAS++ D+ M+ LW+SR LK
Sbjct: 1932 IGTSSETTTASISYQDIPEMLAASKLWISRNSEKLK 1967
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 165 LGPKKILITASVAISDLTSMVTLKGLWLSRG*RTLK 58
+G TAS++ D+ M+ LW+SR LK
Sbjct: 1932 IGTSSETTTASISYQDIPEMLAASKLWISRNSEKLK 1967
>U53146-1|AAA96111.1| 348|Caenorhabditis elegans Hypothetical
protein ZC411.1 protein.
Length = 348
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -1
Query: 402 INLFGMHSKPSDIYNGTFPSSNNFMRSVNG 313
INL P ++ GT+ + NF++ V G
Sbjct: 235 INLLTGQKPPETVFQGTYVETRNFLKIVRG 264
>AC087081-18|AAK66030.1| 124|Caenorhabditis elegans Hypothetical
protein Y82E9BL.1 protein.
Length = 124
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -3
Query: 256 PRSYLVREPIQFVEFMPVFFQCDGESIIVV 167
P+S L+R+PIQ V+ V CDGE+ + +
Sbjct: 93 PQS-LLRKPIQIVDDCSVKMYCDGEAKLFI 121
>AC024696-1|AAK84516.1| 348|Caenorhabditis elegans Hypothetical
protein F07B7.7 protein.
Length = 348
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -1
Query: 402 INLFGMHSKPSDIYNGTFPSSNNFMRSVNG 313
INL P ++ GT+ + NF++ V G
Sbjct: 235 INLLTGQKPPETVFQGTYVETRNFLKIVRG 264
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,274,059
Number of Sequences: 27780
Number of extensions: 281576
Number of successful extensions: 831
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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