Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_A04
         (311 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   1.1  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   1.5  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   1.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   6.0  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        20   8.0  
DQ069332-1|AAZ32217.1|  296|Apis mellifera RNA polymerase II lar...    20   8.0  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 270 SFTLNTPIIKKLNNGISLII 211
           + T +TP++KKL  G S II
Sbjct: 116 NITNSTPLLKKLYGGNSTII 135


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 270 SFTLNTPIIKKLNNGISLIINENQFNDIVN 181
           + T +TP++KKL  G  L I      D+V+
Sbjct: 213 NITNSTPLLKKLYGGPLLRIFTKHMLDVVS 242


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 270 SFTLNTPIIKKLNNGISLIINENQFNDIVN 181
           + T +TP++KKL  G  L I      D+V+
Sbjct: 228 NITNSTPLLKKLYGGPLLRIFTKHMLDVVS 257


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 66  GLKRMDKEGKLVFLS 110
           GLK +DK G+ V LS
Sbjct: 881 GLKVLDKSGRSVQLS 895


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 87  PYPFSLVPNDP 55
           PY ++L PN P
Sbjct: 219 PYCYNLTPNQP 229


>DQ069332-1|AAZ32217.1|  296|Apis mellifera RNA polymerase II large
           subunit protein.
          Length = 296

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 111 TPGDHLRFTDQWMISEIIN 167
           TPG+ LR T +  ++ I+N
Sbjct: 189 TPGNTLRQTFENQVNRILN 207


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,359
Number of Sequences: 438
Number of extensions: 1523
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6595479
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)