Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_A02
         (502 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D569AF Cluster: PREDICTED: similar to CG31619-PA...    33   3.6  
UniRef50_A1VQT6 Cluster: Short-chain dehydrogenase/reductase SDR...    32   8.3  

>UniRef50_UPI0000D569AF Cluster: PREDICTED: similar to CG31619-PA,
           isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG31619-PA, isoform A - Tribolium castaneum
          Length = 1191

 Score = 33.1 bits (72), Expect = 3.6
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +2

Query: 38  KSDYSIKAASVAQLYYGATVVLRSRVRSPGRVKCYWVFLLNIIPKSAIF--ARNGGIRNP 211
           K   ++K    A ++ G TV ++  V+   R K  WV   N +PKS  +  ++ G +R  
Sbjct: 701 KKKIALKVGGSATVFIGTTVKIKCPVKRFNRTKIQWVKDKNFLPKSKKYKTSKKGALRVQ 760

Query: 212 N 214
           N
Sbjct: 761 N 761


>UniRef50_A1VQT6 Cluster: Short-chain dehydrogenase/reductase SDR;
           n=2; Proteobacteria|Rep: Short-chain
           dehydrogenase/reductase SDR - Polaromonas
           naphthalenivorans (strain CJ2)
          Length = 286

 Score = 31.9 bits (69), Expect = 8.3
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = -2

Query: 390 TISSFTKVLACHSNCL*LFNRVIT*HKLTPVIAEGLGRGEIANCTTRISPSLVPSQ 223
           ++ +F +VLA H     L +R +  H L      G GRG I N  +  S + +P++
Sbjct: 114 SVQAFDRVLAVHLRGTFLMSRAVARHMLQAAPVPGRGRGAIVNLGSIASSTGLPAR 169


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 442,632,762
Number of Sequences: 1657284
Number of extensions: 8506637
Number of successful extensions: 20488
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20484
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)