Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_A02
         (502 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   4.7  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   6.2  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   6.2  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   8.2  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 73  AVVLRCDCRSEVSGSIPGS 129
           A+  R +C    +GSIPG+
Sbjct: 75  ALRFRYECEGRSAGSIPGA 93


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +2

Query: 80  YYGATVVLRSRVRSPGRVKCYWVFLLNIIPKSAI 181
           Y    V L   +   GRV+   V +LN++ K A+
Sbjct: 296 YVSCVVALIILILQCGRVRSEVVKILNVLKKIAL 329


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +2

Query: 80  YYGATVVLRSRVRSPGRVKCYWVFLLNIIPKSAI 181
           Y    V L   +   GRV+   V +LN++ K A+
Sbjct: 222 YVSCVVALIILILQCGRVRSEVVKILNVLKKIAL 255


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 41  SDYSIKAASVAQLYY 85
           SDY  K A + Q+Y+
Sbjct: 145 SDYRAKLAQIRQIYH 159


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,100
Number of Sequences: 336
Number of extensions: 2182
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)