Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_P23
(384 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0500 - 3623837-3624019,3624591-3624778,3625209-3626147,362... 38 0.004
04_01_0082 + 897026-897028,897101-897350,898454-898608,898686-89... 34 0.044
08_02_0036 - 11455762-11455802,11455996-11456104,11456207-114568... 33 0.077
06_03_0095 - 16575938-16576585,16577028-16577219,16577294-165773... 31 0.24
03_01_0177 + 1424773-1424850,1425307-1425391,1425498-1425577,142... 31 0.24
10_08_0471 + 18153024-18153026,18153310-18153429,18153826-18153957 30 0.72
05_03_0382 + 13342764-13342958,13343178-13343278,13343373-133434... 28 2.2
11_08_0055 - 28095996-28096934 27 3.8
09_02_0221 + 5962606-5963197,5963711-5963837,5963994-5964100,596... 27 5.1
10_08_0827 + 20849312-20849833,20850352-20850417,20850786-208510... 27 6.7
05_03_0087 + 8286700-8288088 27 6.7
08_02_1203 + 25262875-25263492,25264761-25264813,25265308-252653... 26 8.9
>02_01_0500 - 3623837-3624019,3624591-3624778,3625209-3626147,
3626311-3626479,3626701-3626871,3626948-3627016,
3627094-3627201,3627844-3627997,3628659-3628738,
3628822-3628914,3628951-3629073,3629165-3629915,
3630123-3630163,3630338-3630385
Length = 1038
Score = 37.5 bits (83), Expect = 0.004
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = -2
Query: 380 SIPQTYKGFQIMLKGGWD*NRGLGPDGLGKQYPIKTVQKNDKKGLGHKKRKIEDP 216
+I ++ G +I+ GW GLG G G + P++ + + GLG ++RK DP
Sbjct: 958 AIDESNVGNRILRNMGWQEGLGLGKTGSGIKEPVQAKSVDVRAGLGSQQRKSSDP 1012
>04_01_0082 +
897026-897028,897101-897350,898454-898608,898686-898967,
899078-899160,899335-899485,899896-899952,900279-900479
Length = 393
Score = 33.9 bits (74), Expect = 0.044
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = -2
Query: 359 GFQIMLKGGWD*NRGLGPDGLGKQYPIKTVQKNDKKGLGHKKRKIEDPKQDTVKYKNGQI 180
GF+++ K GW +GLG + G PIK ++ K G+G +++ +D V+ + I
Sbjct: 65 GFRLLQKMGWK-GKGLGKNEQGITEPIKAGIRDAKLGVGKQEQDDFFTSEDNVQRRKLNI 123
Query: 179 LIKNYHDN-KKLEIM 138
++ ++ KK E++
Sbjct: 124 ELEETEEHIKKRELL 138
>08_02_0036 -
11455762-11455802,11455996-11456104,11456207-11456854,
11457422-11457491,11458563-11458624,11458729-11458803,
11459423-11459514,11460233-11461466
Length = 776
Score = 33.1 bits (72), Expect = 0.077
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -2
Query: 359 GFQIMLKGGWD*NRGLGPDGLGKQYPIKTVQKNDKKGLG 243
G ++M K G+ GLG DG G PI+ +Q+ GLG
Sbjct: 614 GSKMMAKMGFIEGTGLGKDGQGMMQPIQPIQRPKSLGLG 652
>06_03_0095 - 16575938-16576585,16577028-16577219,16577294-16577392,
16577496-16577618,16577717-16577929,16578143-16578251,
16578339-16578427,16578604-16578880,16578974-16579084,
16579160-16580508,16581218-16581631
Length = 1207
Score = 31.5 bits (68), Expect = 0.24
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 183 LSVFVFNCILFWVFNLSLLMSKTFLIILLHSFYWILFS*AIW 308
L V ++ C++ WV N + +S + I+ H F W S A+W
Sbjct: 1050 LGVLMYTCVV-WVVNCQMALSVNYFTIIQHIFIW--GSIAVW 1088
>03_01_0177 +
1424773-1424850,1425307-1425391,1425498-1425577,
1425771-1425898,1425962-1426049,1426187-1426277,
1426712-1426881,1427151-1427438,1427527-1427643,
1427924-1427976,1428029-1428090,1429042-1429118,
1429269-1429322,1429417-1429476,1429581-1429658,
1429805-1429851,1429933-1430051,1430280-1430364,
1430443-1430557,1430662-1430784,1430869-1430969,
1431346-1431475
Length = 742
Score = 31.5 bits (68), Expect = 0.24
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -2
Query: 356 FQIMLKGGWD*NRGLGPDGLGKQYPIKTVQKNDKKGLG----HKKRKIEDPKQDTVKYKN 189
F++M + GW+ GLG D G + ++ K D G+G H K + + D + K
Sbjct: 20 FRLMKQMGWEEGEGLGKDKQGIKGHVRVKNKQDTLGVGVDSPHNKWVYDTTQFDNILKKL 79
Query: 188 GQILIKN 168
+L N
Sbjct: 80 KVVLFDN 86
>10_08_0471 + 18153024-18153026,18153310-18153429,18153826-18153957
Length = 84
Score = 29.9 bits (64), Expect = 0.72
Identities = 13/31 (41%), Positives = 23/31 (74%)
Frame = -2
Query: 299 LGKQYPIKTVQKNDKKGLGHKKRKIEDPKQD 207
+G+ P+++ KN+K+GLG K+ K++ PK D
Sbjct: 1 MGRLEPVESRVKNNKRGLGSKEPKLK-PKVD 30
>05_03_0382 +
13342764-13342958,13343178-13343278,13343373-13343459,
13343559-13343709,13343826-13344116,13346058-13346197,
13346276-13346467,13346559-13346631,13346708-13346852,
13347017-13347124,13347213-13347306,13348245-13348324,
13348665-13348738,13349236-13349253
Length = 582
Score = 28.3 bits (60), Expect = 2.2
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -2
Query: 266 KNDKKGLGHKKRKIEDPKQDTVKYKNGQILIK 171
KN + H ++ E+PK++T+K + +L+K
Sbjct: 397 KNPSREKAHSAKEKEEPKEETIKNTDEAVLLK 428
>11_08_0055 - 28095996-28096934
Length = 312
Score = 27.5 bits (58), Expect = 3.8
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -2
Query: 266 KNDKKGLGHKKRKIEDPKQDTVKYKNGQILIKNYHDNK 153
KND G+G RK+ Q T Y G L +Y+D+K
Sbjct: 265 KNDMVGVGELSRKLLPAVQKTESYA-GVTLWNSYYDSK 301
>09_02_0221 +
5962606-5963197,5963711-5963837,5963994-5964100,
5964185-5964328,5964700-5964822,5964921-5965103,
5965540-5965718,5965797-5965823
Length = 493
Score = 27.1 bits (57), Expect = 5.1
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = -2
Query: 359 GFQIMLKGGWD*NRGLGPDGLGKQYPIKTVQ-KNDKKGLGHKKRKIEDPKQDTV--KYKN 189
G +++ K GW GLG + G+ PI K D G+G + E +D + +YK
Sbjct: 414 GHKLLSKMGWREGEGLGSERSGRADPIMAGDVKKDHLGVG-AVQPGEVTSEDDIYEQYKK 472
Query: 188 GQILIKNYHDN 156
+L Y N
Sbjct: 473 RMMLGYRYRPN 483
>10_08_0827 +
20849312-20849833,20850352-20850417,20850786-20851082,
20851215-20851412,20851748-20851849,20851960-20852100,
20852171-20852278,20852588-20852670,20852829-20852991,
20853636-20853650,20853968-20854093
Length = 606
Score = 26.6 bits (56), Expect = 6.7
Identities = 10/41 (24%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 90 YL*IINVGTLIKFSSKHYFQLFVIM-IILYQYLSVFVFNCI 209
Y+ ++N+G + + KH + F++ LY Y+S +++ +
Sbjct: 563 YMNVVNIGVQVDEARKHGYNSFIVYGYTLYAYISPRIWSAM 603
>05_03_0087 + 8286700-8288088
Length = 462
Score = 26.6 bits (56), Expect = 6.7
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -3
Query: 238 RRERLKTQNRIQLNTKTD 185
R +RLK+QNR+Q++ K D
Sbjct: 230 RSDRLKSQNRLQISRKKD 247
>08_02_1203 +
25262875-25263492,25264761-25264813,25265308-25265373,
25265581-25265695,25265860-25265970
Length = 320
Score = 26.2 bits (55), Expect = 8.9
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = -2
Query: 380 SIPQTYKGFQIMLKGGWD*NRGLGPDGLGKQYPIKTVQKNDKKGLGHKKRKIEDPKQDTV 201
+IP+T GF+++ + G+D G G G + P+ + + GLG + P Q +
Sbjct: 80 AIPETNVGFRLLKRMGYDPAAG---GGAGAE-PVGIEIRRSRAGLGAEPAVSVAPPQPSA 135
Query: 200 KYKNGQ 183
+ G+
Sbjct: 136 EVAEGE 141
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,338,780
Number of Sequences: 37544
Number of extensions: 170227
Number of successful extensions: 377
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 377
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 636799876
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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