Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_P22
         (525 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z11126-4|CAA77472.2|  180|Caenorhabditis elegans Hypothetical pr...    28   3.6  
Z81487-3|CAB03997.2|  345|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p...    28   4.7  
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U40060-5|AAA81143.2|  690|Caenorhabditis elegans Hypothetical pr...    27   6.2  
AF003385-2|AAB54249.1|  773|Caenorhabditis elegans Hypothetical ...    27   8.2  

>Z11126-4|CAA77472.2|  180|Caenorhabditis elegans Hypothetical
           protein ZK643.6 protein.
          Length = 180

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -1

Query: 432 KLVTLWLPLLYCERYRHNKVRLFCKLS 352
           K+  +W+P  +C ++ H+KV+  C  S
Sbjct: 149 KMCPIWVPRGFCSKFDHDKVQKSCAKS 175


>Z81487-3|CAB03997.2|  345|Caenorhabditis elegans Hypothetical
           protein C54E10.4 protein.
          Length = 345

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +2

Query: 425 TSFRLLQGCHEKCRCLILLISYGLY 499
           ++F  L   H  C+C ++++S G+Y
Sbjct: 278 STFSFLMSSHSMCQCFVMVMSNGVY 302


>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical protein
            ZK945.9 protein.
          Length = 3178

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +3

Query: 63   NIVGNIVIELGEKSKLFSGTYTAQATSVGAAKYGYDLKMDSTGVL 197
            NI  N+  +L         T  A+A + G   Y Y   +D TG++
Sbjct: 1788 NIAKNLANQLASTLDTLENTLAARAIATGNLPYDYSNSVDGTGMV 1832


>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
            protein ZK945.9 protein.
          Length = 3178

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +3

Query: 63   NIVGNIVIELGEKSKLFSGTYTAQATSVGAAKYGYDLKMDSTGVL 197
            NI  N+  +L         T  A+A + G   Y Y   +D TG++
Sbjct: 1788 NIAKNLANQLASTLDTLENTLAARAIATGNLPYDYSNSVDGTGMV 1832


>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical
           protein T21E8.2 protein.
          Length = 1263

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +2

Query: 341 YSTILNLQNSRTLLCRYRSQYKSGSQSVTSFRLLQGCHEKCRCLILLISYGLYYFYC 511
           Y T+ +L    T + RY  + K+G +         G H   R L+  IS G  YF+C
Sbjct: 249 YKTVCSLNGQNTEIERYTEELKAGEK--------YGIH---RALMYSISRGFTYFFC 294


>U40060-5|AAA81143.2|  690|Caenorhabditis elegans Hypothetical
           protein F38B6.6 protein.
          Length = 690

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/50 (26%), Positives = 26/50 (52%)
 Frame = -2

Query: 230 TVYYLWANFKMQYTGGVHL*IISILCSSYASCLCCVSSGEQF*FLA*FYN 81
           T +  W N+K+  T  +   +++I+C + A+ L     G+Q   +  F+N
Sbjct: 97  TTFTFWLNYKLHETSTLGYHVVNIICHTVAT-LVFYKLGKQLEHIFDFFN 145


>AF003385-2|AAB54249.1|  773|Caenorhabditis elegans Hypothetical
           protein R08F11.7 protein.
          Length = 773

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +3

Query: 54  ADLNIVGNIVIELGEKSKLFSGTYTAQATSVGAAKYGYDLKMDSTGVL 197
           AD  IV + +     K   F+G     AT +   KYG D+  D+  VL
Sbjct: 52  ADGAIVSSQIANAESKQLQFTGDVLEIATQILVKKYGVDILEDANEVL 99


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,620,590
Number of Sequences: 27780
Number of extensions: 228035
Number of successful extensions: 574
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 574
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)