BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_P20
(574 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 24 1.2
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 24 1.2
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 24 1.2
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 24 1.2
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 24 1.2
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 24 1.2
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 24 1.2
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 24 1.2
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 24 1.2
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 1.6
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 23 2.1
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 3.8
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 3.8
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 3.8
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 5.0
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 6.6
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 6.6
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 6.6
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 6.6
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 6.6
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 6.6
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 6.6
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 6.6
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 6.6
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 6.6
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 6.6
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 6.6
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 6.6
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 6.6
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 6.6
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 6.6
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 21 6.6
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 6.6
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 6.6
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 21 6.6
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 8.7
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 8.7
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.2
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 563 HYNYRNTTYYIFTHNYNN 510
+YNY N Y +NYNN
Sbjct: 88 NYNYSNYNNYNNNNNYNN 105
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.8 bits (49), Expect = 1.2
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 563 HYNYRNTTYYIFTHNYNN 510
+YNY N Y +NYNN
Sbjct: 88 NYNYSNYNNYNNNNNYNN 105
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.2
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 563 HYNYRNTTYYIFTHNYNN 510
+YNY N Y +NYNN
Sbjct: 88 NYNYSNYNNYNNNNNYNN 105
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.2
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 563 HYNYRNTTYYIFTHNYNN 510
+YNY N Y +NYNN
Sbjct: 88 NYNYSNYNNYNNNNNYNN 105
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.2
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 563 HYNYRNTTYYIFTHNYNN 510
+YNY N Y +NYNN
Sbjct: 88 NYNYSNYNNYNNNNNYNN 105
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.2
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 563 HYNYRNTTYYIFTHNYNN 510
+YNY N Y +NYNN
Sbjct: 88 NYNYSNYNNYNNNNNYNN 105
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.2
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 563 HYNYRNTTYYIFTHNYNN 510
+YNY N Y +NYNN
Sbjct: 88 NYNYSNYNNYNNNNNYNN 105
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.2
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 563 HYNYRNTTYYIFTHNYNN 510
+YNY N Y +NYNN
Sbjct: 88 NYNYSNYNNYNNNNNYNN 105
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +1
Query: 178 LVPGGTLHVCGVQSPP*QHADRWSRIKHYIY 270
++PG HVCGV+ P + Y+Y
Sbjct: 533 VIPGTQEHVCGVKGIPCSWGRAINVANRYVY 563
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.4 bits (48), Expect = 1.6
Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
Frame = -3
Query: 560 YNYRNTTYYI--FTHNYNNTIK 501
YNY N Y + +NYNN K
Sbjct: 331 YNYNNNNYNNNNYNNNYNNNCK 352
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 23.0 bits (47), Expect = 2.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 563 HYNYRNTTYYIFTHNYNNTI 504
+YNY N Y +NYN +
Sbjct: 321 NYNYNNNNYKYNYNNYNKKL 340
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 3.8
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3
Query: 557 NYRNTTYYIFTHNYNN 510
NY+ + Y + +NYNN
Sbjct: 88 NYKYSNYNNYNNNYNN 103
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -3
Query: 557 NYRNTTYYIFTHNYNNTIK 501
NY N + +NYNN K
Sbjct: 96 NYNNNYNNNYNNNYNNNYK 114
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 3.8
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3
Query: 557 NYRNTTYYIFTHNYNN 510
NY+ + Y + +NYNN
Sbjct: 88 NYKYSNYNNYNNNYNN 103
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -3
Query: 557 NYRNTTYYIFTHNYNNTIK 501
NY N + +NYNN K
Sbjct: 96 NYNNNYNNNYNNNYNNNYK 114
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.2 bits (45), Expect = 3.8
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3
Query: 557 NYRNTTYYIFTHNYNN 510
NY+ + Y + +NYNN
Sbjct: 321 NYKYSNYNNYNNNYNN 336
Score = 22.2 bits (45), Expect = 3.8
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 563 HYNYRNTTYYIFTHNYNNTIK 501
+YN Y + +NYNN K
Sbjct: 329 NYNNNYNNYNNYNNNYNNNYK 349
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 5.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 563 HYNYRNTTYYIFTHNYNN 510
+YNY N Y + +NYNN
Sbjct: 88 NYNYSN--YNNYNNNYNN 103
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -3
Query: 563 HYNYRNTTYYIFTHNYN 513
+YNY N HNYN
Sbjct: 91 NYNYNNNYNNYNKHNYN 107
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -3
Query: 557 NYRNTTYYIFTHNYNNTIK 501
NY+ + Y + +NYN K
Sbjct: 88 NYKYSNYNNYNNNYNTNYK 106
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -3
Query: 557 NYRNTTYYIFTHNYNNTIK 501
NY+ + Y + +NYN K
Sbjct: 88 NYKYSNYNNYNNNYNTNYK 106
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -3
Query: 557 NYRNTTYYIFTHNYNNTIK 501
NY+ + Y + +NYN K
Sbjct: 88 NYKYSNYNNYNNNYNTNYK 106
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -3
Query: 557 NYRNTTYYIFTHNYNNTIK 501
NY+ + Y + +NYN K
Sbjct: 88 NYKYSNYNNYNNNYNTNYK 106
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -3
Query: 557 NYRNTTYYIFTHNYNNTIK 501
NY+ + Y + +NYN K
Sbjct: 88 NYKYSNYNNYNNNYNTNYK 106
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -3
Query: 557 NYRNTTYYIFTHNYNNTIK 501
NY+ + Y + +NYN K
Sbjct: 88 NYKYSNYNNYNNNYNTNYK 106
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -3
Query: 557 NYRNTTYYIFTHNYNNTIK 501
NY+ + Y + +NYN K
Sbjct: 88 NYKYSNYNNYNNNYNTNYK 106
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -3
Query: 563 HYNYRNTTYYIFTHNYN 513
+YNY N HNYN
Sbjct: 91 NYNYNNNYNNYNKHNYN 107
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -3
Query: 563 HYNYRNTTYYIFTHNYN 513
+YNY N HNYN
Sbjct: 91 NYNYNNNYNNYNKHNYN 107
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -3
Query: 563 HYNYRNTTYYIFTHNYN 513
+YNY N HNYN
Sbjct: 91 NYNYNNNYNNYNKHNYN 107
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -3
Query: 563 HYNYRNTTYYIFTHNYN 513
+YNY N HNYN
Sbjct: 91 NYNYNNNYNNYNKHNYN 107
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -3
Query: 563 HYNYRNTTYYIFTHNYN 513
+YNY N HNYN
Sbjct: 91 NYNYNNNYNNYNKHNYN 107
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -3
Query: 563 HYNYRNTTYYIFTHNYN 513
+YNY N HNYN
Sbjct: 91 NYNYNNNYNNYNKHNYN 107
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -3
Query: 563 HYNYRNTTYYIFTHNYN 513
+YNY N HNYN
Sbjct: 91 NYNYNNNYNNYNKHNYN 107
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -3
Query: 563 HYNYRNTTYYIFTHNYN 513
+YNY N HNYN
Sbjct: 91 NYNYNNNYNNYNKHNYN 107
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3
Query: 569 RKHYNYRNTTYYIFT 525
R+HY+ +TTY T
Sbjct: 240 RRHYSMNSTTYVTLT 254
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -3
Query: 563 HYNYRNTTYYIFTHNYN 513
+YNY N HNYN
Sbjct: 324 NYNYNNNYNNYNKHNYN 340
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -3
Query: 563 HYNYRNTTYYIFTHNYN 513
+YNY N HNYN
Sbjct: 324 NYNYNNNYNNYNKHNYN 340
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 563 HYNYRNTTYYIFTHNYNNT 507
H N+ + +Y I +N NNT
Sbjct: 477 HLNHADFSYTIVINNRNNT 495
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 172 RVLVPGGTLHVCGV 213
RVLVPG +V GV
Sbjct: 926 RVLVPGSQQNVAGV 939
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.0 bits (42), Expect = 8.7
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3
Query: 557 NYRNTTYYIFTHNYNN 510
NY N Y +NYNN
Sbjct: 328 NYNNNNYNNNYNNYNN 343
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,485
Number of Sequences: 438
Number of extensions: 3169
Number of successful extensions: 44
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -