Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_P18
(590 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0861 - 23763927-23764034,23764140-23764196,23764624-237647... 37 0.010
07_03_1465 - 26729872-26730909 32 0.39
07_03_1464 + 26726527-26727552 32 0.39
10_08_0842 - 20954712-20957738 31 0.52
07_03_1467 - 26736859-26736868,26737769-26738439 31 0.52
09_04_0411 + 17366559-17367497 31 0.69
07_03_1469 - 26742772-26743848 31 0.69
05_01_0166 + 1145829-1145971,1146211-1146235,1147330-1147425,114... 31 0.69
07_03_1468 - 26739872-26740912 30 1.2
09_04_0421 + 17417851-17418840 29 2.1
09_04_0417 + 17404433-17405392 29 3.7
09_04_0412 + 17369935-17370873 29 3.7
09_04_0410 + 17362751-17363698 29 3.7
07_03_1206 + 24878301-24879308 29 3.7
04_04_1558 - 34417801-34417920,34418930-34419051,34419458-344195... 29 3.7
03_05_0136 + 21158917-21159939,21160183-21160241,21160259-211602... 29 3.7
07_01_0447 - 3377666-3378673 28 4.8
02_05_0955 - 33056171-33057256 28 4.8
01_06_1701 - 39290537-39291077,39292110-39292801 28 4.8
08_02_0997 + 23409932-23410894 28 6.4
08_02_0995 - 23401390-23402379 28 6.4
08_02_0418 + 16908077-16908156,16908307-16908595,16908686-16908955 28 6.4
07_03_0669 - 20542481-20542489,20543212-20543872,20543899-205439... 28 6.4
09_04_0103 - 14623125-14623475,14623574-14623672,14624089-146247... 27 8.5
04_04_1285 - 32382614-32382720,32383032-32383710,32383816-323839... 27 8.5
02_04_0288 + 21607289-21608251 27 8.5
02_02_0545 - 11376016-11378307 27 8.5
>12_02_0861 -
23763927-23764034,23764140-23764196,23764624-23764740,
23764825-23764924,23765049-23765239,23765328-23765421,
23765918-23766023,23766223-23766337,23766487-23766554,
23766724-23767047,23767444-23767647,23767910-23768059,
23768151-23768256,23768383-23768490
Length = 615
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/75 (28%), Positives = 39/75 (52%)
Frame = +2
Query: 11 ENVSQVVFTELPCNICNLRVLS*QKTVPSRKEWCVVDAITAGKEHSSADQIDQWRIPRIM 190
E+ + + ELPC I ++++ S +K+ KE CV + +SS D++ QW+ I+
Sbjct: 206 ESTNMSYWEELPCGIYSIQLKSLEKSGMCMKEACVSEVRRHDWINSSLDELIQWKRKSIV 265
Query: 191 DEVTPRASNRGVSGN 235
V S++ G+
Sbjct: 266 PTVDDLTSHQNSVGD 280
>07_03_1465 - 26729872-26730909
Length = 345
Score = 31.9 bits (69), Expect = 0.39
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +3
Query: 426 PVIVYMHPGGFYSVSGRS---DVSGPEYQLDRDVVIVTINYRLA 548
PV+VY H GGF S S D V+V++NYRLA
Sbjct: 91 PVVVYFHGGGFVLFSAASRPYDALCRRISRGVGAVVVSVNYRLA 134
>07_03_1464 + 26726527-26727552
Length = 341
Score = 31.9 bits (69), Expect = 0.39
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 399 THGHGQKLRPVIVYMHPGGFYSVSGRS---DVSGPEYQLDRDVVIVTINYRLA 548
T G + PV+V+ H GGF S S D + V+V++NYRLA
Sbjct: 74 TKGEAAQALPVVVFFHGGGFVLFSAASCYYDRLCRRICRELRAVVVSVNYRLA 126
>10_08_0842 - 20954712-20957738
Length = 1008
Score = 31.5 bits (68), Expect = 0.52
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Frame = +3
Query: 99 EKNGVSSTQSPQEKNTAPLTRSTSGVFRGSWMKSRRGRPIEAYRGIRYAEP---PVGELR 269
E NG SS+ + +AP RS SG S S RP ++P PV + R
Sbjct: 225 ELNGSSSSDDESKATSAPPARSISGAAGRSNGPSLPSRPAGLGASTSLSQPSARPVQQTR 284
Query: 270 FQPPILIEHYT-AEVDATQEG 329
P+ ++ T +V++ ++G
Sbjct: 285 ANGPVAVDRETRQDVESPEDG 305
>07_03_1467 - 26736859-26736868,26737769-26738439
Length = 226
Score = 31.5 bits (68), Expect = 0.52
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +3
Query: 426 PVIVYMHPGGF---YSVSGRSDVSGPEYQLDRDVVIVTINYRLA 548
PV+VY H GGF + S + D + V+V++NYRLA
Sbjct: 102 PVVVYFHGGGFALLTAASSQYDALCRRLCRELRAVVVSVNYRLA 145
>09_04_0411 + 17366559-17367497
Length = 312
Score = 31.1 bits (67), Expect = 0.69
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +3
Query: 411 GQKLRPVIVYMHPGGFYSVSGRSDVSG---PEYQLDRDVVIVTINYRLASLGFLSTG 572
G+KL PV+VY H GGF S S V++V++NYRLA L G
Sbjct: 70 GKKL-PVLVYFHGGGFIIESADSATYHNYLNSVAAAAGVLVVSVNYRLAPENPLPAG 125
>07_03_1469 - 26742772-26743848
Length = 358
Score = 31.1 bits (67), Expect = 0.69
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +3
Query: 426 PVIVYMHPGGFYSVSGR-SDVSGPEYQL--DRDVVIVTINYRLA 548
PV+VY H GGF S + G +L D VV+V++NYRLA
Sbjct: 105 PVMVYYHGGGFALFSPAVAPFDGVCRRLCGDVGVVVVSVNYRLA 148
>05_01_0166 +
1145829-1145971,1146211-1146235,1147330-1147425,
1147544-1147645,1147767-1147889,1147996-1148622,
1148710-1148883,1148965-1149181,1149312-1149394,
1149478-1149573,1149676-1149724,1149850-1150088,
1150547-1150618,1150694-1150804,1150930-1151282,
1151377-1151464,1151691-1151789,1151860-1151991,
1152119-1152222,1153179-1153215,1153334-1153367,
1153451-1153467
Length = 1006
Score = 31.1 bits (67), Expect = 0.69
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -1
Query: 533 DGDDDNISVELVLRTGDIAAPRHGVESSRV 444
D DDDNI+ E LR+ PRHG++SS++
Sbjct: 614 DSDDDNINQEDNLRSE--VTPRHGLKSSKI 641
>07_03_1468 - 26739872-26740912
Length = 346
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 423 RPVIVYMHPGGFYSVSGRSDVSGPEYQLDRDVVIVTINYRLA 548
RPV+VY H GGF S S + V+V+++YRLA
Sbjct: 87 RPVVVYFHGGGFTLFSAASRAYDALCR-TLCAVVVSVDYRLA 127
>09_04_0421 + 17417851-17418840
Length = 329
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = +3
Query: 405 GHGQKLRPVIVYMHPGGFYSVSG-RSDVSGPEYQL--DRDVVIVTINYRLA 548
G+G++L PV+V+ H GGF S + G +L V++V++ YRLA
Sbjct: 74 GYGRRL-PVLVFFHGGGFCLGSAFDAATHGHANRLAARAGVIVVSVEYRLA 123
>09_04_0417 + 17404433-17405392
Length = 319
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +3
Query: 405 GHGQKLRPVIVYMHPGGFYSVSGRSDVSG---PEYQLDRDVVIVTINYRLA 548
GH +K P++VY H GG S S + V++NYRLA
Sbjct: 70 GHHRKKLPIVVYFHGGGMVLDSAASPTYHRYLNSLVSKAGALAVSVNYRLA 120
>09_04_0412 + 17369935-17370873
Length = 312
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +3
Query: 411 GQKLRPVIVYMHPGGFYSVSGRSDVSG---PEYQLDRDVVIVTINYRLASLGFLSTG 572
G+KL PV+VY H GGF S S V++V+++YRLA L G
Sbjct: 70 GKKL-PVLVYFHGGGFIIESADSATYHNYLNSAAAAAGVLVVSVDYRLAPENPLPAG 125
>09_04_0410 + 17362751-17363698
Length = 315
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +3
Query: 417 KLRPVIVYMHPGGFYSVSGRSDVSG---PEYQLDRDVVIVTINYRLA 548
K PV+V+ H GGF S S + VV+V+++YRLA
Sbjct: 72 KKLPVLVFFHGGGFLIESADSSTYHNYVNPFAAAAGVVVVSVDYRLA 118
>07_03_1206 + 24878301-24879308
Length = 335
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +3
Query: 405 GHGQKLRPVIVYMHPGG--FYSV-SGRSDVSGPEYQLDRDVVIVTINYRLA 548
G G L PV+VY H GG F+SV S + D + V+ ++++RLA
Sbjct: 86 GGGDHL-PVVVYFHGGGFVFHSVASAQFDALCRRFASAIPAVVASVDFRLA 135
>04_04_1558 -
34417801-34417920,34418930-34419051,34419458-34419531,
34419736-34419819,34419945-34420080,34420806-34420836,
34421228-34421386,34422375-34422595,34422685-34422898
Length = 386
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 142 FFSCGDCVDDTPFFSRWHCFLL*QNP*VA 56
FF C C+ P+ R + +L+ NP +A
Sbjct: 278 FFGCSTCISGLPYMRRHNIYLMLDNPPMA 306
>03_05_0136 +
21158917-21159939,21160183-21160241,21160259-21160294,
21160345-21160387,21160582-21160698,21162090-21162179,
21162329-21162436,21162547-21162588
Length = 505
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -1
Query: 395 NVESEAVFINRIVVVDWLRACRSLLSGVHLRGVMLDQYWRLKPKFSDWW 249
N ++EAV N++ + +WL L V+L + +K +F WW
Sbjct: 326 NAKAEAVSKNKLSIFEWLIFFPKLRYMVYLHMLKCTPPLEIKHQFIKWW 374
>07_01_0447 - 3377666-3378673
Length = 335
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Frame = +3
Query: 381 LRLNVYT---HGHGQKLRPVIVYMHPGGF 458
LRL +Y HG + PV+VY H GGF
Sbjct: 63 LRLRMYAPANHGGEEGKLPVLVYFHGGGF 91
>02_05_0955 - 33056171-33057256
Length = 361
Score = 28.3 bits (60), Expect = 4.8
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = +3
Query: 405 GHGQKLRPVIVYMHPGGFY--SVSGRSDVSGPEYQLDR-DVVIVTINYRLA 548
G G++L P++VY+H G F S S R E R V+V+++YRLA
Sbjct: 85 GDGRRL-PLVVYVHGGAFCTGSASARMFHDYAESLSARAAAVVVSVDYRLA 134
>01_06_1701 - 39290537-39291077,39292110-39292801
Length = 410
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +3
Query: 426 PVIVYMHPGGFYSVSGRS---DVSGPEYQLDRDVVIVTINYRLA 548
P++V H GGF S S S D D ++V + YRLA
Sbjct: 133 PIVVQFHGGGFVSGSSSSAANDAFCRRVAKMCDAIVVAVGYRLA 176
>08_02_0997 + 23409932-23410894
Length = 320
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +3
Query: 405 GHGQKLRPVIVYMHPGGFYSVSGRSDVS-GPEYQL--DRDVVIVTINYRLA 548
G +KL PV+VY+H GG S + G +L ++V+++YRLA
Sbjct: 67 GGERKLLPVVVYLHGGGLVVGSAADALEHGFANRLCARARALVVSVDYRLA 117
>08_02_0995 - 23401390-23402379
Length = 329
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +3
Query: 426 PVIVYMHPGGFYSVSGRSDVSG---PEYQLDRDVVIVTINYRLA 548
PV+VY H GGF S S V VV V+++YRLA
Sbjct: 73 PVVVYFHGGGFVVHSAFSRVHSRFLNALVAAAGVVAVSVDYRLA 116
>08_02_0418 + 16908077-16908156,16908307-16908595,16908686-16908955
Length = 212
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 75 HNKKQCHREKNGVSSTQSPQEKNTAPLTRS 164
HN++ C +K G+ TQ PQ T + S
Sbjct: 88 HNQRGCKLKKTGLRPTQQPQRAATTTVEES 117
>07_03_0669 -
20542481-20542489,20543212-20543872,20543899-20543983,
20545311-20546625
Length = 689
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +3
Query: 411 GQKLRPVIVYMHPGGFYSVS--GRSDVSGPEYQLDR-DVVIVTINYRLA 548
G++L PV+VY H G F + S GR+ R ++V++ YRLA
Sbjct: 78 GRRLLPVVVYFHGGCFCTESAFGRTYHRYAASLASRAGALVVSVEYRLA 126
>09_04_0103 -
14623125-14623475,14623574-14623672,14624089-14624724,
14625803-14625964
Length = 415
Score = 27.5 bits (58), Expect = 8.5
Identities = 22/81 (27%), Positives = 33/81 (40%)
Frame = +3
Query: 33 LLSYLVISATYGFCHNKKQCHREKNGVSSTQSPQEKNTAPLTRSTSGVFRGSWMKSRRGR 212
L Y+ SA G KKQ +K+ +S+ KN T + S+RG
Sbjct: 90 LQPYVKPSAEAGPTQTKKQTRTQKDAAASSSGQSSKNQPETTEPR--------VASKRGS 141
Query: 213 PIEAYRGIRYAEPPVGELRFQ 275
+A + I AE G + F+
Sbjct: 142 KKKAVKAISLAEAAKGSIVFK 162
>04_04_1285 -
32382614-32382720,32383032-32383710,32383816-32383926,
32384007-32384065,32384163-32384271,32384387-32384575,
32384650-32385476,32385501-32385633
Length = 737
Score = 27.5 bits (58), Expect = 8.5
Identities = 23/85 (27%), Positives = 34/85 (40%)
Frame = +3
Query: 111 VSSTQSPQEKNTAPLTRSTSGVFRGSWMKSRRGRPIEAYRGIRYAEPPVGELRFQPPILI 290
VSST S T P + G R M S G ++ R + + + G FQ P I
Sbjct: 477 VSSTYSGTIAGTMPSL--SPGYHRQ--MDSPYGSGVQTPRALTHQQAAWGVQGFQSPAGI 532
Query: 291 EHYTAEVDATQEGPACPQPVYDNYP 365
H+ + + P Q + N+P
Sbjct: 533 NHHQVHLSSYPNTPYQHQQIQSNHP 557
>02_04_0288 + 21607289-21608251
Length = 320
Score = 27.5 bits (58), Expect = 8.5
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 7/48 (14%)
Frame = +3
Query: 426 PVIVYMHPGGFYSVSGRSDVSGPEYQ--LDR-----DVVIVTINYRLA 548
PV+VY+H GGF + S S P Y L+R + V+++YRLA
Sbjct: 75 PVVVYVHGGGFVAESAAS----PSYHLFLNRLAAACPALCVSVDYRLA 118
>02_02_0545 - 11376016-11378307
Length = 763
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 401 ARTWTETTSGDSVHAPWRILLRVWAQRCL 487
AR WT+ W++L RVWA+ L
Sbjct: 686 ARLWTQLMVIPDQEMTWKLLARVWAELML 714
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,528,359
Number of Sequences: 37544
Number of extensions: 395313
Number of successful extensions: 1176
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1169
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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