Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_P15
(509 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 53 1e-07
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 51 4e-07
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 51 4e-07
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 41 5e-04
U41031-2|AAA82619.2| 615|Caenorhabditis elegans Hypothetical pr... 30 0.85
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 29 1.5
AL032621-2|CAA21491.2| 147|Caenorhabditis elegans Hypothetical ... 28 4.5
U53141-1|AAA96103.1| 322|Caenorhabditis elegans Serpentine rece... 27 7.9
AL032660-1|CAA21752.1| 711|Caenorhabditis elegans Hypothetical ... 27 7.9
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical protein
F29G6.1 protein.
Length = 1170
Score = 52.8 bits (121), Expect = 1e-07
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Frame = +1
Query: 4 EYAPVCGSNGKTYANKCSLECTQKIIPS-------LKMEHDGECQGAKLASLHPCICTRE 162
EY+PVC SNG+ N+C L+ + ++ + L ++DGEC + C +
Sbjct: 875 EYSPVCASNGQNIVNECELDKIRCLVENNVTTGDKLVKDYDGEC-----CRIENCDIS-V 928
Query: 163 KDPVCGSDGVTYSNLCLL---KCASL--SKPSLSIEHTGPCDN 276
PVC ++GVT++N+CL+ C + +K ++ + + G C N
Sbjct: 929 FSPVCDTEGVTHANMCLMDQNACIQMKKNKKTIQVSYQGQCCN 971
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 145 CICTREKDPVCGSDGVTYSNLCLLKCASLSKPSLSIEHTGPC 270
C C PVCG+D VTY+NLC L+C + L + G C
Sbjct: 19 CDCPSVIRPVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTC 60
Score = 44.8 bits (101), Expect = 4e-05
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 7 YAPVCGSNGKTYANKCSL--ECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKDPVCG 180
Y P+CG+NG T+ N CSL E + ++++ + G C C + PVC
Sbjct: 776 YDPLCGTNGVTFTNACSLQKEICESANSTIEVAYTGMCCDTN--------CPSDFSPVCD 827
Query: 181 SDGVTYSNLC 210
S G T+ N+C
Sbjct: 828 SKGSTHQNIC 837
Score = 43.2 bits (97), Expect = 1e-04
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Frame = +1
Query: 13 PVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKDPVCGSDGV 192
PVCG++ TY N C L C Q+ L ++G C K C + P+C + G
Sbjct: 27 PVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTCCDKK-------ECEKVGTPICDNFGE 79
Query: 193 TYSNLC---LLKCASLSKPSLSIE--HTGPCDN 276
T+ N C +C LS+ H G C +
Sbjct: 80 THINDCHFAQFQCIMKKSMGLSLTKLHMGRCSS 112
Score = 42.7 bits (96), Expect = 1e-04
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Frame = +1
Query: 13 PVCGSNGKTYANKCSLECTQKIIPS----LKMEHDGECQGAKLASLHPCICTREKDPVCG 180
PVC S G + N C ++ I S + + + C +K A PC T +K P+C
Sbjct: 543 PVCDSAGNLHGNLCEFTYSRCIAASKGHQIHIATEENCI-SKEACQMPC--TDDKHPICA 599
Query: 181 SDGVTYSNLCLLKCASLSKPSLSIEHTGPC 270
SD TY NLC + L + G C
Sbjct: 600 SDFSTYENLCQFRKQKCLDSELEVLFKGKC 629
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Frame = +1
Query: 13 PVCGSNGKTYANKC---SLECTQKIIPSLKME--HDGECQGAKLASLHPCICTREKDPVC 177
P+C + G+T+ N C +C K L + H G C H C T E DPVC
Sbjct: 72 PICDNFGETHINDCHFAQFQCIMKKSMGLSLTKLHMGRCSSKDCN--HNCTNT-EFDPVC 128
Query: 178 GSDGVTYSNLCLLK 219
++G Y NLC+ +
Sbjct: 129 DTNGSVYRNLCVFQ 142
Score = 38.7 bits (86), Expect = 0.002
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +1
Query: 16 VCGSNGKTYANKCSLE---CTQKIIP--SLKMEHDGECQGAKLASLHPCICTREKDPVCG 180
VC S G+T+ N C + C + I +L + H GEC LAS C + PVC
Sbjct: 1030 VCDSEGQTHMNHCVYQQRRCMAQTISQKTLNIVHTGEC--CALAS-----CPKTGQPVCD 1082
Query: 181 SDGVTYSNLC 210
S G T+ +LC
Sbjct: 1083 SRGRTHDSLC 1092
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Frame = +1
Query: 151 CTREKDPVCGSDGVTYSNLCLLK---CASLSKPSLSIEHTGP-CDNN 279
C DP+CG++GVT++N C L+ C S + ++ + +TG CD N
Sbjct: 772 CDNSYDPLCGTNGVTFTNACSLQKEICES-ANSTIEVAYTGMCCDTN 817
Score = 35.5 bits (78), Expect = 0.023
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Frame = +1
Query: 13 PVCGSNGKTYANKCSLE---CT-QKIIPS-LKMEHDGECQGAKLASLHPCICTREKDPVC 177
PVC + +T+ N C + C KI S + + H G C+ K + C +K P+C
Sbjct: 263 PVCDTRNRTHKNVCQFKFFACKINKIDGSVIDIAHSGACRARKSTCI-TCPKDEKKIPIC 321
Query: 178 GSDGVTYSNLC 210
+ +T+ LC
Sbjct: 322 DNRNMTHPTLC 332
Score = 34.3 bits (75), Expect = 0.052
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 15/105 (14%)
Frame = +1
Query: 13 PVCGSNGKTYANKCSL----------ECTQKIIPSLKMEHDGECQGAKLASLHPCICTRE 162
P+C + T+ CS E ++++ +K H+ Q + P C+R+
Sbjct: 319 PICDNRNMTHPTLCSFIQYNCEARNNEDEERVLVHIKSCHERSPQFTLKDEICPRTCSRD 378
Query: 163 KDPVCGSDGVTYSNLCLLKCASLSKPSLSI-----EHTGPCDNNR 282
PVC T+ NLC + + + L I + PC NR
Sbjct: 379 VKPVCDEANNTHQNLCHFQQYNCNMRKLGIRSPYLRYLRPCVKNR 423
Score = 33.5 bits (73), Expect = 0.091
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
Frame = +1
Query: 13 PVCGSNGKTYANKCSLECTQ----KIIPSLKMEHDGECQGAKLASLHPCICTREKDPVCG 180
PVC T+ N C Q ++ +L + + GEC L P VC
Sbjct: 980 PVCDGT-ITHPNICRFRIAQCEAERVNKTLSIAYSGEC------CLLPKGECESSGAVCD 1032
Query: 181 SDGVTYSNLCLL---KC--ASLSKPSLSIEHTGPC 270
S+G T+ N C+ +C ++S+ +L+I HTG C
Sbjct: 1033 SEGQTHMNHCVYQQRRCMAQTISQKTLNIVHTGEC 1067
Score = 31.9 bits (69), Expect = 0.28
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = +1
Query: 4 EYAPVCGSNGKTYANKCSLECTQKIIPS-----LKMEHDGECQGAKLASLHPCICTREKD 168
+++PVC S G T+ N C + I L ++ C K + C +E
Sbjct: 821 DFSPVCDSKGSTHQNICHFGVKRCIAERTFGDVLTIDKFEVCNEVKECN---NACPKEYS 877
Query: 169 PVCGSDGVTYSNLCLL 216
PVC S+G N C L
Sbjct: 878 PVCASNGQNIVNECEL 893
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Frame = +1
Query: 151 CTREKDPVCGSDGVTYSNLCLLK---CA--SLSKPSLSIEHTGPC 270
C + DPVC + T+ N+C K C + + I H+G C
Sbjct: 257 CDKSWDPVCDTRNRTHKNVCQFKFFACKINKIDGSVIDIAHSGAC 301
Score = 27.9 bits (59), Expect = 4.5
Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 2/88 (2%)
Frame = +1
Query: 13 PVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKDPVCGSDGV 192
PVC S G+T+ + C ++ I + ++ + P CT E +C
Sbjct: 1079 PVCDSRGRTHDSLCHFHNSKCIFDKIHTQNTTLTLDYQ-GKCCPAGCTDELSVICDQHEN 1137
Query: 193 TYSNLCL--LKCASLSKPSLSIEHTGPC 270
Y N C LK + + + PC
Sbjct: 1138 IYRNSCYFNLKACETWRRTQDVLLATPC 1165
Score = 27.1 bits (57), Expect = 7.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 4 EYAPVCGSNGKTYANKC 54
E+ PVC +NG Y N C
Sbjct: 123 EFDPVCDTNGSVYRNLC 139
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 51.2 bits (117), Expect = 4e-07
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 22/109 (20%)
Frame = +1
Query: 13 PVCGSNGKTYANKCSLE---CTQKIIPSLKMEHDGECQGAKLASLHPC------------ 147
PVC +NG+T+ N+C ++ C K + +K++H G C A+ C
Sbjct: 403 PVCATNGETFDNECEMKKKSCETKSM--IKVKHQGTCGIGVCATFDSCKKPQVCVVVDGK 460
Query: 148 ------ICTREKDPVCGSDGVTYSNLCLLK-CASLSKPSLSIEHTGPCD 273
CT E VCGSDG TYSN C L+ A +++ ++ +++ C+
Sbjct: 461 PKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACE 509
Score = 41.1 bits (92), Expect = 5e-04
Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 19/110 (17%)
Frame = +1
Query: 1 LEYAPVCGSNGKTYANKCSLE---CTQKIIPSLK-MEHDGECQGAKLASLHPC------- 147
+E +PVC S+G Y + C L C K ++K C G K + C
Sbjct: 255 VESSPVCSSHGVDYQSSCHLRHHACESKTNITVKFFGRCDPCHGHKCPNGQTCQLGVDRR 314
Query: 148 -------ICTREKDPVCGSDGVTYSNLCLLKCASL-SKPSLSIEHTGPCD 273
CT VCG+DG TY N C LK A+ + + + G CD
Sbjct: 315 PECKCSEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCD 364
Score = 40.3 bits (90), Expect = 8e-04
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 25/115 (21%)
Frame = +1
Query: 4 EYAPVCGSNGKTYANKCSLECTQKII-PSLKMEHDGECQGAKLA---------------S 135
E+ VCGS+GKTY+N+C L+ + ++ ++++ C+ KL
Sbjct: 471 EFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKEKCDFYSACVVGENE 530
Query: 136 LHPCIC--------TREKDPVCGSDGVTYSNLC-LLKCASLSKPSLSIEHTGPCD 273
C C E VCG+DGVTYS+ C + K A + G CD
Sbjct: 531 KAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKCD 585
Score = 39.5 bits (88), Expect = 0.001
Identities = 36/111 (32%), Positives = 50/111 (45%), Gaps = 24/111 (21%)
Frame = +1
Query: 10 APVCGSNGKTYANKCSLE-----------------CTQKIIPSLKMEHD--GECQGAKLA 132
A VCG++GKTY N+C L+ C + P KME G C K
Sbjct: 328 AHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCV-VKPD 386
Query: 133 SLHPCIC-TREKD---PVCGSDGVTYSNLCLLKCASL-SKPSLSIEHTGPC 270
C C R +D PVC ++G T+ N C +K S +K + ++H G C
Sbjct: 387 RTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTC 437
Score = 35.5 bits (78), Expect = 0.023
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 16/90 (17%)
Frame = +1
Query: 16 VCGSNGKTYANKCSLE---CTQK--IIPSLKMEHDG----ECQGAKLASLHPCICTRE-- 162
VCG++G TY+++C ++ C Q ++ + + + D +C+ + C+C+
Sbjct: 551 VCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKCDECLHVQCRYGEECRSGVCVCSYNCP 610
Query: 163 KDP-----VCGSDGVTYSNLCLLKCASLSK 237
+P +CG +GV Y +LC L+ AS K
Sbjct: 611 ANPPLSARICGENGVLYPSLCHLQLASCQK 640
Score = 34.7 bits (76), Expect = 0.039
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +1
Query: 172 VCGSDGVTYSNLCLLK 219
VCGSDG TYSNLC LK
Sbjct: 880 VCGSDGTTYSNLCELK 895
Score = 33.1 bits (72), Expect = 0.12
Identities = 29/97 (29%), Positives = 38/97 (39%), Gaps = 24/97 (24%)
Frame = +1
Query: 10 APVCGSNGKTYANKCSLECT--QKIIPSLKMEHDGECQGAKL----------------AS 135
A +CG NG Y + C L+ QK P +M C +K A+
Sbjct: 617 ARICGENGVLYPSLCHLQLASCQKGAPISEMP-PSHCHSSKTSFPDFKVRRPCACYFGAT 675
Query: 136 LHPCICT------REKDPVCGSDGVTYSNLCLLKCAS 228
H CT P+CGSDG+ Y+N C L S
Sbjct: 676 CHNWACTCPTCNLSSNYPICGSDGIVYNNQCHLNTIS 712
Score = 31.5 bits (68), Expect = 0.37
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = +1
Query: 151 CTREKDPVCGSDGVTYSNLCLLKCAS--LSKPS--LSIEHTGPC 270
C D VCGSD V+YS+ C L S L+K L + GPC
Sbjct: 169 CRVVTDVVCGSDHVSYSSFCHLSVRSCVLAKNGVRLRVATKGPC 212
Score = 28.3 bits (60), Expect = 3.4
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 16 VCGSNGKTYANKCSLE 63
VCGS+G TY+N C L+
Sbjct: 880 VCGSDGTTYSNLCELK 895
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 51.2 bits (117), Expect = 4e-07
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 22/109 (20%)
Frame = +1
Query: 13 PVCGSNGKTYANKCSLE---CTQKIIPSLKMEHDGECQGAKLASLHPC------------ 147
PVC +NG+T+ N+C ++ C K + +K++H G C A+ C
Sbjct: 411 PVCATNGETFDNECEMKKKSCETKSM--IKVKHQGTCGIGVCATFDSCKKPQVCVVVDGK 468
Query: 148 ------ICTREKDPVCGSDGVTYSNLCLLK-CASLSKPSLSIEHTGPCD 273
CT E VCGSDG TYSN C L+ A +++ ++ +++ C+
Sbjct: 469 PKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACE 517
Score = 41.1 bits (92), Expect = 5e-04
Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 19/110 (17%)
Frame = +1
Query: 1 LEYAPVCGSNGKTYANKCSLE---CTQKIIPSLK-MEHDGECQGAKLASLHPC------- 147
+E +PVC S+G Y + C L C K ++K C G K + C
Sbjct: 263 VESSPVCSSHGVDYQSSCHLRHHACESKTNITVKFFGRCDPCHGHKCPNGQTCQLGVDRR 322
Query: 148 -------ICTREKDPVCGSDGVTYSNLCLLKCASL-SKPSLSIEHTGPCD 273
CT VCG+DG TY N C LK A+ + + + G CD
Sbjct: 323 PECKCSEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCD 372
Score = 40.3 bits (90), Expect = 8e-04
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 25/115 (21%)
Frame = +1
Query: 4 EYAPVCGSNGKTYANKCSLECTQKII-PSLKMEHDGECQGAKLA---------------S 135
E+ VCGS+GKTY+N+C L+ + ++ ++++ C+ KL
Sbjct: 479 EFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKEKCDFYSACVVGENE 538
Query: 136 LHPCIC--------TREKDPVCGSDGVTYSNLC-LLKCASLSKPSLSIEHTGPCD 273
C C E VCG+DGVTYS+ C + K A + G CD
Sbjct: 539 KAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKCD 593
Score = 39.5 bits (88), Expect = 0.001
Identities = 36/111 (32%), Positives = 50/111 (45%), Gaps = 24/111 (21%)
Frame = +1
Query: 10 APVCGSNGKTYANKCSLE-----------------CTQKIIPSLKMEHD--GECQGAKLA 132
A VCG++GKTY N+C L+ C + P KME G C K
Sbjct: 336 AHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCV-VKPD 394
Query: 133 SLHPCIC-TREKD---PVCGSDGVTYSNLCLLKCASL-SKPSLSIEHTGPC 270
C C R +D PVC ++G T+ N C +K S +K + ++H G C
Sbjct: 395 RTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTC 445
Score = 35.5 bits (78), Expect = 0.023
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 16/90 (17%)
Frame = +1
Query: 16 VCGSNGKTYANKCSLE---CTQK--IIPSLKMEHDG----ECQGAKLASLHPCICTRE-- 162
VCG++G TY+++C ++ C Q ++ + + + D +C+ + C+C+
Sbjct: 559 VCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKCDECLHVQCRYGEECRSGVCVCSYNCP 618
Query: 163 KDP-----VCGSDGVTYSNLCLLKCASLSK 237
+P +CG +GV Y +LC L+ AS K
Sbjct: 619 ANPPLSARICGENGVLYPSLCHLQLASCQK 648
Score = 34.7 bits (76), Expect = 0.039
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +1
Query: 172 VCGSDGVTYSNLCLLK 219
VCGSDG TYSNLC LK
Sbjct: 819 VCGSDGTTYSNLCELK 834
Score = 31.5 bits (68), Expect = 0.37
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = +1
Query: 151 CTREKDPVCGSDGVTYSNLCLLKCAS--LSKPS--LSIEHTGPC 270
C D VCGSD V+YS+ C L S L+K L + GPC
Sbjct: 177 CRVVTDVVCGSDHVSYSSFCHLSVRSCVLAKNGVRLRVATKGPC 220
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +1
Query: 10 APVCGSNGKTYANKCSLECT--QKIIPSLKMEHDGECQGAKLASLHPCICTR 159
A +CG NG Y + C L+ QK P +M C +K + C C R
Sbjct: 625 ARICGENGVLYPSLCHLQLASCQKGAPISEMP-PSHCHSSKTSFPDSCQCNR 675
Score = 28.3 bits (60), Expect = 3.4
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 16 VCGSNGKTYANKCSLE 63
VCGS+G TY+N C L+
Sbjct: 819 VCGSDGTTYSNLCELK 834
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 41.1 bits (92), Expect = 5e-04
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +1
Query: 145 CICTREKDPVCGSDG---VTYSNLCLLKCASLSKPSLSIEHTGPCDNNR 282
C C E DPVC +G TYSN C+ +CA +K L + + G C + R
Sbjct: 25 CSCKPEIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSCCSAR 73
Score = 41.1 bits (92), Expect = 5e-04
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Frame = +1
Query: 4 EYAPVCGSNGKTYANKCSL---ECTQK--IIPSLKMEHDGECQGAKLASLHPCICTREKD 168
E+ PVC G+T+AN C+ +C K + SL++++ G C C +
Sbjct: 128 EWNPVCDKKGQTHANFCTFLNSKCYHKNQLNESLEVDYSGVC------CEDMCSAGQTSL 181
Query: 169 PVCGSDGVTYSNLC---LLKC----ASLSKPSLSIEHTGPC 270
VC S+G T++++C + KC + K L I GPC
Sbjct: 182 TVCDSEGNTHTDICSFYIAKCRQMRRGIGKKRLQIAGVGPC 222
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +1
Query: 4 EYAPVCGSNGK---TYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKDPV 174
E PVC G TY+NKC +C Q+ L + ++G C A+ C + PV
Sbjct: 30 EIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSCCSAR-------YCNMFEQPV 82
Query: 175 CGSDGVTYSNLC 210
C S+G Y +C
Sbjct: 83 C-SEGQMYQTVC 93
Score = 37.5 bits (83), Expect = 0.006
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Frame = +1
Query: 13 PVCGSNGKTYANKCSLECTQKIIPSLKMEHDG-ECQGAKLASLHPCICTREKDPVCGSDG 189
PVC S G+ Y C E Q I L H + K + PC E +PVC G
Sbjct: 81 PVC-SEGQMYQTVCEFEERQCIEFKLFKNHISMDSSQEKCSCTAPC--PTEWNPVCDKKG 137
Query: 190 VTYSNLCLL---KCASLSK--PSLSIEHTGPC 270
T++N C KC ++ SL ++++G C
Sbjct: 138 QTHANFCTFLNSKCYHKNQLNESLEVDYSGVC 169
>U41031-2|AAA82619.2| 615|Caenorhabditis elegans Hypothetical
protein C16B8.2 protein.
Length = 615
Score = 30.3 bits (65), Expect = 0.85
Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 3/92 (3%)
Frame = +1
Query: 13 PVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGA-KLASLHPCICTREKDPVCGSDG 189
P+CG N NK + Q + + E+D EC + + L C C G
Sbjct: 140 PICGKNCFVALNKNGCQDCQCLWLAQDCENDEECSASNQYCDLGKCNCRDGYQQNMSKSG 199
Query: 190 VTYSNLCLLKCASLSKPSLS--IEHTGPCDNN 279
N + SKP LS +E G CD N
Sbjct: 200 AIPENE-FKRNKRESKPRLSERLEWPGVCDKN 230
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +1
Query: 82 PSLKMEHDGECQGAKLASLHPCICTREKDPV-CGSD-GVTYSNLCLLKCASLSKPSLSIE 255
P ++ H G C KL + C C + K V CGSD V +C + + I
Sbjct: 333 PCTELCHPGPCIECKLFTTKSCNCGKTKKSVRCGSDQEVMCETVCGKQLSCGQHNCERIC 392
Query: 256 HTGPC 270
H+G C
Sbjct: 393 HSGDC 397
>AL032621-2|CAA21491.2| 147|Caenorhabditis elegans Hypothetical
protein Y45F3A.4 protein.
Length = 147
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +1
Query: 145 CICTREKDPVCGSDGV--TYSNLCLLKCASLSKPSLSIEHT 261
C CT+E + V +DGV T + CL+ L PS+ I +T
Sbjct: 27 CKCTKESETVTCTDGVCETENGSCLM----LDHPSMGIHYT 63
>U53141-1|AAA96103.1| 322|Caenorhabditis elegans Serpentine
receptor, class x protein117 protein.
Length = 322
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +2
Query: 347 RMFKIINIQFLMLNFSYILERAL--IFLIKMKNK*YKNVK 460
++F ++ QFL L+FS + RAL + KM + K V+
Sbjct: 251 KLFPVLFFQFLTLSFSMVFLRALEGFIMFKMNERIDKGVR 290
>AL032660-1|CAA21752.1| 711|Caenorhabditis elegans Hypothetical
protein Y70G10A.2 protein.
Length = 711
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Frame = +1
Query: 7 YAPVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCIC--TREKDPVCG 180
+ C G Y N +++C + S++ + ++S C T+E PV
Sbjct: 85 FTVTCNELGAIYPNPSNIDCGE----SVQERKIRDTTNEMVSSCKVCFGRGTKECQPVTN 140
Query: 181 SDGVTYSNLCLLK 219
SDGV C+ K
Sbjct: 141 SDGVVQGYKCVCK 153
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,797,152
Number of Sequences: 27780
Number of extensions: 241621
Number of successful extensions: 650
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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