Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_P11
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    23   2.5  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    21   7.5  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    21   7.5  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    21   7.5  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    21   7.5  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    21   7.5  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    21   7.5  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    21   7.5  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   10.0 
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   10.0 

>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = -1

Query: 462 NKSYTNRITNL*PYHNFSNKYYIKYS*TKHYGGCSLDE 349
           N S +N       Y+N++N Y   Y   ++Y   ++++
Sbjct: 85  NNSLSNNYNYNNNYNNYNNNYNTNYKKLQYYNIINIEQ 122


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = -1

Query: 423 YHNFSNKYYIKYS*TKHYGGCSLDE 349
           Y+N++N Y   Y   ++Y   ++++
Sbjct: 94  YNNYNNNYNTNYKKLQYYNIINIEQ 118


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = -1

Query: 423 YHNFSNKYYIKYS*TKHYGGCSLDE 349
           Y+N++N Y   Y   ++Y   ++++
Sbjct: 94  YNNYNNNYNTNYKKLQYYNIINIEQ 118


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = -1

Query: 423 YHNFSNKYYIKYS*TKHYGGCSLDE 349
           Y+N++N Y   Y   ++Y   ++++
Sbjct: 94  YNNYNNNYNTNYKKLQYYNIINIEQ 118


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = -1

Query: 423 YHNFSNKYYIKYS*TKHYGGCSLDE 349
           Y+N++N Y   Y   ++Y   ++++
Sbjct: 94  YNNYNNNYNTNYKKLQYYNIINIEQ 118


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = -1

Query: 423 YHNFSNKYYIKYS*TKHYGGCSLDE 349
           Y+N++N Y   Y   ++Y   ++++
Sbjct: 94  YNNYNNNYNTNYKKLQYYNIINIEQ 118


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = -1

Query: 423 YHNFSNKYYIKYS*TKHYGGCSLDE 349
           Y+N++N Y   Y   ++Y   ++++
Sbjct: 94  YNNYNNNYNTNYKKLQYYNIINIEQ 118


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = -1

Query: 423 YHNFSNKYYIKYS*TKHYGGCSLDE 349
           Y+N++N Y   Y   ++Y   ++++
Sbjct: 94  YNNYNNNYNTNYKKLQYYNIINIEQ 118


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/22 (31%), Positives = 10/22 (45%)
 Frame = -1

Query: 294 YCYANRNYVHDVCCNLDESVLC 229
           YC      +  +C   DE V+C
Sbjct: 147 YCLTPTERLEALCWTQDEDVIC 168


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 456 SYTNRITNL*PYHNFSNKYYIKY 388
           +Y N   N   Y+N++N Y   Y
Sbjct: 326 NYNNYNNNYNNYNNYNNNYNNNY 348


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,833
Number of Sequences: 438
Number of extensions: 2898
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)