Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_P09
         (642 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical pr...   136   1e-32
Z81592-2|CAB04726.1|  407|Caenorhabditis elegans Hypothetical pr...    28   4.9  
U39742-3|AAY86225.1|  188|Caenorhabditis elegans Hypothetical pr...    28   4.9  
AL033510-7|CAA22069.1|  124|Caenorhabditis elegans Hypothetical ...    28   6.5  
U23412-5|AAK21467.2|  492|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical
           protein B0393.1 protein.
          Length = 276

 Score =  136 bits (330), Expect = 1e-32
 Identities = 60/106 (56%), Positives = 78/106 (73%), Gaps = 5/106 (4%)
 Frame = +2

Query: 203 GAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNT 382
           G  TNQIQ  F+EPRLL++ DP  DHQ +TEASYV +PVI+  NT+SPL+ +DI +PCN 
Sbjct: 106 GCLTNQIQKTFKEPRLLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNN 165

Query: 383 KSSHSIGLMWWLLAREVLRLRGVLSRDQRW-----DVVVDLFFYRD 505
           K   SIGLMWW+LARE+L LRG +SR   +     +++ DL+FYRD
Sbjct: 166 KGERSIGLMWWMLAREILILRGKISRQTGFVLEGKEIMPDLYFYRD 211



 Score = 93.9 bits (223), Expect = 9e-20
 Identities = 40/70 (57%), Positives = 52/70 (74%)
 Frame = +1

Query: 1   YKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATP 180
           YKRR DG ++IN+++TWEK           E+PADV V+S+R + QRA+LKFAAHTGAT 
Sbjct: 39  YKRRFDGPNIINVKKTWEKLLLAARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATA 98

Query: 181 IAGRFTPGCI 210
           I GRF+PGC+
Sbjct: 99  IFGRFSPGCL 108


>Z81592-2|CAB04726.1|  407|Caenorhabditis elegans Hypothetical
           protein T16G1.2 protein.
          Length = 407

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = -1

Query: 225 WIWLVNAPRSETSSNWC--CASVGSKFKHSTLAKC 127
           W WL N+ +   + NWC  C   G+ F H    KC
Sbjct: 342 WDWLTNSCKDVFALNWCGKCHDFGNIFLHD--CKC 374


>U39742-3|AAY86225.1|  188|Caenorhabditis elegans Hypothetical
           protein C25F6.8 protein.
          Length = 188

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 329 CNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVL 436
           CNTD+  R +     CNT   + +G+ + L+AR ++
Sbjct: 49  CNTDAEFRLIQCCSSCNT---NGVGIAYDLVARSLV 81


>AL033510-7|CAA22069.1|  124|Caenorhabditis elegans Hypothetical
           protein Y40H7A.11 protein.
          Length = 124

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 380 TKSSHSIGLMWWLLA 424
           T+  H IG+MWWL A
Sbjct: 72  TRVEHKIGIMWWLCA 86


>U23412-5|AAK21467.2|  492|Caenorhabditis elegans Hypothetical
           protein T10F2.4 protein.
          Length = 492

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 91  EDPADVFVISSRAFGQRAVLKFAAHTGATPIA 186
           EDP  V  +S   F +R ++KF A  G  PI+
Sbjct: 13  EDPV-VSQVSGHIFDRRLIVKFIAENGTDPIS 43


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,439,846
Number of Sequences: 27780
Number of extensions: 253231
Number of successful extensions: 667
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)