Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_P07
         (611 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    25   0.77 
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   3.1  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   3.1  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    23   3.1  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    22   5.4  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    22   5.4  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    22   5.4  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    22   5.4  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   9.5  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   9.5  

>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +3

Query: 432 LSNVTYPAFVHGVRTVIDKHLKAIDEA-YSFVEE 530
           L N+   AF H  + +IDK LK   E  Y  V +
Sbjct: 17  LRNLAQQAFAHSNQLIIDKSLKGWKEVEYEVVRD 50


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 355 RLSSFPYTSNKYINI 311
           R SS PY   KY+N+
Sbjct: 314 RFSSLPYYKYKYLNV 328


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 355 RLSSFPYTSNKYINI 311
           R SS PY   KY+N+
Sbjct: 314 RFSSLPYYKYKYLNV 328


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -2

Query: 559 PAIYFDLERYSSTKLYASSIAFKCLSITVLT 467
           P I+F++     T  Y  ++   C+SI+ L+
Sbjct: 223 PDIFFNITLRRKTLFYTVNLIVPCVSISYLS 253


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 206 SARKGTFETRVFEEKSSPHGTSVRTWRSYYH*QSRD 313
           ++RK    +R  E+KS  +  S R +R  +  +SRD
Sbjct: 34  TSRKRYSRSREREQKSYKNENSYRKYRETWKERSRD 69


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 206 SARKGTFETRVFEEKSSPHGTSVRTWRSYYH*QSRD 313
           ++RK    +R  E+KS  +  S R +R  +  +SRD
Sbjct: 34  TSRKRYSRSREREQKSYKNENSYRKYRETWKERSRD 69


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 206 SARKGTFETRVFEEKSSPHGTSVRTWRSYYH*QSRD 313
           ++RK    +R  E+KS  +  S R +R  +  +SRD
Sbjct: 34  TSRKRYSRSREREQKSYKNENSYRKYRETWKERSRD 69


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 206 SARKGTFETRVFEEKSSPHGTSVRTWRSYYH*QSRD 313
           ++RK    +R  E+KS  +  S R +R  +  +SRD
Sbjct: 34  TSRKRYSRSREREQKSYKNENSYRKYRETWKERSRD 69


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 189 PREDLIYQKPSWQHVPG 139
           P + L Y+ P W HV G
Sbjct: 516 PVKYLTYEYPWWSHVLG 532


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 189 PREDLIYQKPSWQHVPG 139
           P + L Y+ P W HV G
Sbjct: 569 PVKYLTYEYPWWSHVLG 585


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,011
Number of Sequences: 438
Number of extensions: 3583
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)