Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_P01
(636 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein. 249 1e-66
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 248 3e-66
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 248 3e-66
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 248 3e-66
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 233 6e-62
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 233 6e-62
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 229 1e-60
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 229 1e-60
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 229 1e-60
J05066-1|AAA27989.1| 261|Caenorhabditis elegans alpha-2 (IV) co... 222 2e-58
Z72507-3|CAA96625.1| 337|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z78201-2|CAB01588.1| 324|Caenorhabditis elegans Hypothetical pr... 33 0.23
U12966-7|AAK84534.1| 352|Caenorhabditis elegans Dumpy : shorter... 33 0.23
AF465981-1|AAL76993.1| 324|Caenorhabditis elegans cuticle colla... 33 0.23
AF262406-1|AAL08218.1| 324|Caenorhabditis elegans cuticle colla... 33 0.23
AF039720-3|AAB96697.1| 281|Caenorhabditis elegans Collagen prot... 32 0.30
Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical pr... 32 0.40
AY494975-1|AAR87492.1| 486|Caenorhabditis elegans collagen/olfa... 31 0.52
AF000262-4|AAN60526.2| 486|Caenorhabditis elegans Colmedin (col... 31 0.52
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.69
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 31 0.91
Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical p... 31 0.91
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p... 31 0.91
AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protei... 31 0.91
AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protei... 31 0.91
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei... 31 0.91
Z81499-2|CAB04088.1| 598|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z81052-6|CAB02874.1| 336|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical pr... 30 1.2
U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protei... 30 1.2
U80441-8|AAB37656.1| 284|Caenorhabditis elegans Dumpy : shorter... 30 1.2
M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein ( C.ele... 30 1.2
AY494976-1|AAR87493.1| 598|Caenorhabditis elegans UNC-122 protein. 30 1.2
AL032634-3|CAE45092.1| 412|Caenorhabditis elegans Hypothetical ... 30 1.2
AF003151-6|AAK18909.1| 314|Caenorhabditis elegans Collagen prot... 30 1.2
AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen prot... 30 1.2
Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z49907-2|CAA90084.1| 324|Caenorhabditis elegans Hypothetical pr... 30 1.6
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 30 1.6
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 30 1.6
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 30 1.6
J03146-1|AAA65468.1| 324|Caenorhabditis elegans collagen protein. 30 1.6
Z70271-3|CAA94234.1| 358|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z68113-2|CAA92149.2| 327|Caenorhabditis elegans Hypothetical pr... 29 2.1
U33919-1|AAA96505.1| 327|Caenorhabditis elegans MEC-5 precursor... 29 2.1
U33918-1|AAA96504.1| 327|Caenorhabditis elegans MEC-5 protein. 29 2.1
AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical... 29 2.1
AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen prot... 29 2.1
Z68113-3|CAA92150.1| 333|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z68005-4|CAA91992.2| 430|Caenorhabditis elegans Hypothetical pr... 29 2.8
AY347577-1|AAP97871.1| 322|Caenorhabditis elegans COLlagen stru... 29 2.8
AC006665-1|AAF39908.1| 322|Caenorhabditis elegans Dumpy : short... 29 2.8
Z74037-4|CAA98490.1| 295|Caenorhabditis elegans Hypothetical pr... 29 3.7
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 29 3.7
U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protei... 29 3.7
U29244-13|AAC71083.1| 291|Caenorhabditis elegans Collagen prote... 29 3.7
U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter... 28 4.9
U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter... 28 4.9
U21318-2|AAC46668.1| 285|Caenorhabditis elegans Collagen protei... 28 4.9
L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein. 28 4.9
L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protei... 28 4.9
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 28 4.9
Z81104-3|CAD89749.1| 660|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z73425-5|CAA97787.1| 427|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical pr... 28 6.4
U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen prote... 28 6.4
U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter... 28 6.4
U40060-2|AAP82656.1| 108|Caenorhabditis elegans Collagen protei... 28 6.4
U40060-1|AAA81141.1| 341|Caenorhabditis elegans Collagen protei... 28 6.4
U39644-7|AAO44908.1| 307|Caenorhabditis elegans Collagen protei... 28 6.4
L23651-12|AAA27958.1| 305|Caenorhabditis elegans Collagen prote... 28 6.4
AL032632-7|CAA21586.1| 313|Caenorhabditis elegans Hypothetical ... 28 6.4
AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen pro... 28 6.4
AC024751-12|ABF71717.1| 301|Caenorhabditis elegans Collagen pro... 28 6.4
Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z69662-1|CAA93499.1| 359|Caenorhabditis elegans Hypothetical pr... 27 8.5
U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protei... 27 8.5
U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protei... 27 8.5
U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protei... 27 8.5
U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protei... 27 8.5
U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protei... 27 8.5
U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protei... 27 8.5
>J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein.
Length = 313
Score = 249 bits (609), Expect = 1e-66
Identities = 115/211 (54%), Positives = 136/211 (64%), Gaps = 1/211 (0%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGLQXXXXXXXXXXXXXXXXXXXXFYFTIHSQTRL 182
P G G+PG G QG QG G G +GL F F HSQT
Sbjct: 44 PPGLSGMPGHGGDQGFQGAAGRTGNQGLPGTPGYPGSPGGWAPSRG---FTFAKHSQTTA 100
Query: 183 IPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFCNLNNVCDFAQR 362
+PQCP G S LWEG+SL+++ NG+A GQDLG PGSCL KF+TMP+MFCN+N+VC + R
Sbjct: 101 VPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCNMNSVCHVSSR 160
Query: 363 EDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQSNTVPTCPNGWEE 542
DYSFWLST EPM M P+ + YISRC VCE PT+ IAVHSQ +VP CP GW
Sbjct: 161 NDYSFWLSTDEPMTPMMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDTSVPQCPQGWSG 220
Query: 543 LWIGYSFLMHT-AGADASGQSLISPGSCLRE 632
+W GYSF+MHT AGA+ +GQSL SPGSCL E
Sbjct: 221 MWTGYSFVMHTAAGAEGTGQSLQSPGSCLEE 251
Score = 80.6 bits (190), Expect = 9e-16
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Frame = +3
Query: 162 IHSQTRLIPQCPAGTSSLWEGFSLI-HIVANGKAHGQDLGAPGSCLRKFSTMPYMFCNLN 338
+HSQ +PQCP G S +W G+S + H A + GQ L +PGSCL +F +P++ C+
Sbjct: 204 VHSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIECHGR 263
Query: 339 NVCDFAQREDYSFWLSTPEP-----MPMAMTPIQARDVGTYISRCQVC 467
C++ ++ FW S + PM+ T ++A + +SRCQVC
Sbjct: 264 GTCNY-YATNHGFWPSIVDQDKQFRKPMSQT-LKAGGLKDRVSRCQVC 309
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 248 bits (606), Expect = 3e-66
Identities = 115/211 (54%), Positives = 135/211 (63%), Gaps = 1/211 (0%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGLQXXXXXXXXXXXXXXXXXXXXFYFTIHSQTRL 182
P G G+PG G QG QG G G GL F F HSQT
Sbjct: 1233 PPGLSGMPGHGGDQGFQGAAGRTGNPGLPGTPGYPGSPGGWAPSRG---FTFAKHSQTTA 1289
Query: 183 IPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFCNLNNVCDFAQR 362
+PQCP G S LWEG+SL+++ NG+A GQDLG PGSCL KF+TMP+MFCN+N+VC + R
Sbjct: 1290 VPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCNMNSVCHVSSR 1349
Query: 363 EDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQSNTVPTCPNGWEE 542
DYSFWLST EPM M P+ + YISRC VCE PT+ IAVHSQ +VP CP GW
Sbjct: 1350 NDYSFWLSTDEPMTPMMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDTSVPQCPQGWSG 1409
Query: 543 LWIGYSFLMHT-AGADASGQSLISPGSCLRE 632
+W GYSF+MHT AGA+ +GQSL SPGSCL E
Sbjct: 1410 MWTGYSFVMHTAAGAEGTGQSLQSPGSCLEE 1440
Score = 83.4 bits (197), Expect = 1e-16
Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
Frame = +3
Query: 162 IHSQTRLIPQCPAGTSSLWEGFSLI-HIVANGKAHGQDLGAPGSCLRKFSTMPYMFCNLN 338
+HSQ +PQCP G S +W G+S + H A + GQ L +PGSCL +F +P++ C+
Sbjct: 1393 VHSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIECHGR 1452
Query: 339 NVCDFAQREDYSFWLSTPEP-----MPMAMTPIQARDVGTYISRCQVC 467
C++ ++ FWLS + PM+ T ++A + +SRCQVC
Sbjct: 1453 GTCNY-YATNHGFWLSIVDQDKQFRKPMSQT-LKAGGLKDRVSRCQVC 1498
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G PG GLQG+ G GLKG EG+
Sbjct: 97 GLPGSPGHPGLQGLDGLPGLKGEEGI 122
Score = 31.9 bits (69), Expect = 0.40
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +3
Query: 6 MGSIGIPGARGLQGIQGRVGLKGFEGL 86
MGS G G RGL G G GL+G +GL
Sbjct: 87 MGSKGARGDRGLPGSPGHPGLQGLDGL 113
Score = 31.1 bits (67), Expect = 0.69
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G PG GL G+ GR G +G G
Sbjct: 1153 PRGDDGFPGRDGLDGLPGRPGREGLPG 1179
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G GA+G G+QG GL G +GL
Sbjct: 367 GEAGPHGAQGFDGVQGGKGLPGHDGL 392
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G+PG G GI G GLKG GL
Sbjct: 835 GLDGVPGPPGYPGITGMPGLKGESGL 860
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
GS G PG RGL G+ G+ G G G
Sbjct: 1116 GSNGYPGERGLPGVPGQQGRSGDNG 1140
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGLQ 89
P G G PG RG+ G+ G GL G G++
Sbjct: 502 PDGYPGTPGERGMDGLPGFPGLHGEPGMR 530
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G G+PG+ G G+QG GL G +G
Sbjct: 94 GDRGLPGSPGHPGLQGLDGLPGLKG 118
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G+PG +G +GI G G GF G+
Sbjct: 109 GLDGLPGLKGEEGIPGCNGTDGFPGM 134
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G +G PG GL G G GLKG +G
Sbjct: 273 GPVGPPGMLGLDGPPGYPGLKGQKG 297
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G PG G G QGR G KG+ G+
Sbjct: 886 GFPGSPGQPGYPGQQGREGEKGYPGI 911
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G +G GARG +G+ G G G +GL
Sbjct: 85 GDMGSKGARGDRGLPGSPGHPGLQGL 110
Score = 27.5 bits (58), Expect = 8.5
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLK 71
G G+PG G+ G++GR+G++
Sbjct: 201 GPYGLPGFPGVSGLKGRMGVR 221
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G G PG RGL G+ G+ G G G
Sbjct: 1062 GLPGYPGERGLPGLDGKRGHDGLPG 1086
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 248 bits (606), Expect = 3e-66
Identities = 115/211 (54%), Positives = 135/211 (63%), Gaps = 1/211 (0%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGLQXXXXXXXXXXXXXXXXXXXXFYFTIHSQTRL 182
P G G+PG G QG QG G G GL F F HSQT
Sbjct: 1490 PPGLSGMPGHGGDQGFQGAAGRTGNPGLPGTPGYPGSPGGWAPSRG---FTFAKHSQTTA 1546
Query: 183 IPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFCNLNNVCDFAQR 362
+PQCP G S LWEG+SL+++ NG+A GQDLG PGSCL KF+TMP+MFCN+N+VC + R
Sbjct: 1547 VPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCNMNSVCHVSSR 1606
Query: 363 EDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQSNTVPTCPNGWEE 542
DYSFWLST EPM M P+ + YISRC VCE PT+ IAVHSQ +VP CP GW
Sbjct: 1607 NDYSFWLSTDEPMTPMMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDTSVPQCPQGWSG 1666
Query: 543 LWIGYSFLMHT-AGADASGQSLISPGSCLRE 632
+W GYSF+MHT AGA+ +GQSL SPGSCL E
Sbjct: 1667 MWTGYSFVMHTAAGAEGTGQSLQSPGSCLEE 1697
Score = 83.4 bits (197), Expect = 1e-16
Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
Frame = +3
Query: 162 IHSQTRLIPQCPAGTSSLWEGFSLI-HIVANGKAHGQDLGAPGSCLRKFSTMPYMFCNLN 338
+HSQ +PQCP G S +W G+S + H A + GQ L +PGSCL +F +P++ C+
Sbjct: 1650 VHSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIECHGR 1709
Query: 339 NVCDFAQREDYSFWLSTPEP-----MPMAMTPIQARDVGTYISRCQVC 467
C++ ++ FWLS + PM+ T ++A + +SRCQVC
Sbjct: 1710 GTCNY-YATNHGFWLSIVDQDKQFRKPMSQT-LKAGGLKDRVSRCQVC 1755
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G PG GLQG+ G GLKG EG+
Sbjct: 97 GLPGSPGHPGLQGLDGLPGLKGEEGI 122
Score = 31.9 bits (69), Expect = 0.40
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +3
Query: 6 MGSIGIPGARGLQGIQGRVGLKGFEGL 86
MGS G G RGL G G GL+G +GL
Sbjct: 87 MGSKGARGDRGLPGSPGHPGLQGLDGL 113
Score = 31.1 bits (67), Expect = 0.69
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G PG GL G+ GR G +G G
Sbjct: 1410 PRGDDGFPGRDGLDGLPGRPGREGLPG 1436
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G GA+G G+QG GL G +GL
Sbjct: 367 GEAGPHGAQGFDGVQGGKGLPGHDGL 392
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G+PG G GI G GLKG GL
Sbjct: 1092 GLDGVPGPPGYPGITGMPGLKGESGL 1117
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
GS G PG RGL G+ G+ G G G
Sbjct: 1373 GSNGYPGERGLPGVPGQQGRSGDNG 1397
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGLQ 89
P G G PG RG+ G+ G GL G G++
Sbjct: 759 PDGYPGTPGERGMDGLPGFPGLHGEPGMR 787
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G G+PG+ G G+QG GL G +G
Sbjct: 94 GDRGLPGSPGHPGLQGLDGLPGLKG 118
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGLQ 89
G G PG+ GL G G G GF GLQ
Sbjct: 632 GLPGRPGSDGLPGYPGGPGQNGFPGLQ 658
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G+PG +G +GI G G GF G+
Sbjct: 109 GLDGLPGLKGEEGIPGCNGTDGFPGM 134
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G +G PG GL G G GLKG +G
Sbjct: 273 GPVGPPGMLGLDGPPGYPGLKGQKG 297
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G G PG G G+QG GL G +G
Sbjct: 644 GYPGGPGQNGFPGLQGEPGLAGIDG 668
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G PG G G QGR G KG+ G+
Sbjct: 1143 GFPGSPGQPGYPGQQGREGEKGYPGI 1168
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G +G GARG +G+ G G G +GL
Sbjct: 85 GDMGSKGARGDRGLPGSPGHPGLQGL 110
Score = 27.5 bits (58), Expect = 8.5
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLK 71
G G+PG G+ G++GR+G++
Sbjct: 201 GPYGLPGFPGVSGLKGRMGVR 221
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGLQ 89
G G PG G+ G +GR G G GLQ
Sbjct: 656 GLQGEPGLAGIDGKRGRQGSLGIPGLQ 682
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G G PG RGL G+ G+ G G G
Sbjct: 1319 GLPGYPGERGLPGLDGKRGHDGLPG 1343
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 248 bits (606), Expect = 3e-66
Identities = 115/211 (54%), Positives = 135/211 (63%), Gaps = 1/211 (0%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGLQXXXXXXXXXXXXXXXXXXXXFYFTIHSQTRL 182
P G G+PG G QG QG G G GL F F HSQT
Sbjct: 1489 PPGLSGMPGHGGDQGFQGAAGRTGNPGLPGTPGYPGSPGGWAPSRG---FTFAKHSQTTA 1545
Query: 183 IPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFCNLNNVCDFAQR 362
+PQCP G S LWEG+SL+++ NG+A GQDLG PGSCL KF+TMP+MFCN+N+VC + R
Sbjct: 1546 VPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCNMNSVCHVSSR 1605
Query: 363 EDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQSNTVPTCPNGWEE 542
DYSFWLST EPM M P+ + YISRC VCE PT+ IAVHSQ +VP CP GW
Sbjct: 1606 NDYSFWLSTDEPMTPMMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDTSVPQCPQGWSG 1665
Query: 543 LWIGYSFLMHT-AGADASGQSLISPGSCLRE 632
+W GYSF+MHT AGA+ +GQSL SPGSCL E
Sbjct: 1666 MWTGYSFVMHTAAGAEGTGQSLQSPGSCLEE 1696
Score = 80.6 bits (190), Expect = 9e-16
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Frame = +3
Query: 162 IHSQTRLIPQCPAGTSSLWEGFSLI-HIVANGKAHGQDLGAPGSCLRKFSTMPYMFCNLN 338
+HSQ +PQCP G S +W G+S + H A + GQ L +PGSCL +F +P++ C+
Sbjct: 1649 VHSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIECHGR 1708
Query: 339 NVCDFAQREDYSFWLSTPEP-----MPMAMTPIQARDVGTYISRCQVC 467
C++ ++ FW S + PM+ T ++A + +SRCQVC
Sbjct: 1709 GTCNY-YATNHGFWPSIVDQDKQFRKPMSQT-LKAGGLKDRVSRCQVC 1754
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G PG GLQG+ G GLKG EG+
Sbjct: 97 GLPGSPGHPGLQGLDGLPGLKGEEGI 122
Score = 31.9 bits (69), Expect = 0.40
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +3
Query: 6 MGSIGIPGARGLQGIQGRVGLKGFEGL 86
MGS G G RGL G G GL+G +GL
Sbjct: 87 MGSKGARGDRGLPGSPGHPGLQGLDGL 113
Score = 31.1 bits (67), Expect = 0.69
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G PG GL G+ GR G +G G
Sbjct: 1409 PRGDDGFPGRDGLDGLPGRPGREGLPG 1435
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G GA+G G+QG GL G +GL
Sbjct: 366 GEAGPHGAQGFDGVQGGKGLPGHDGL 391
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G+PG G GI G GLKG GL
Sbjct: 1091 GLDGVPGPPGYPGITGMPGLKGESGL 1116
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
GS G PG RGL G+ G+ G G G
Sbjct: 1372 GSNGYPGERGLPGVPGQQGRSGDNG 1396
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G G+PG+ G G+QG GL G +G
Sbjct: 94 GDRGLPGSPGHPGLQGLDGLPGLKG 118
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGLQ 89
G G PG+ GL G G G GF GLQ
Sbjct: 631 GLPGRPGSDGLPGYPGGPGQNGFPGLQ 657
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G+PG +G +GI G G GF G+
Sbjct: 109 GLDGLPGLKGEEGIPGCNGTDGFPGM 134
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G +G PG GL G G GLKG +G
Sbjct: 273 GPVGPPGMLGLDGPPGYPGLKGQKG 297
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G G PG G G+QG GL G +G
Sbjct: 643 GYPGGPGQNGFPGLQGEPGLAGIDG 667
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G PG G G QGR G KG+ G+
Sbjct: 1142 GFPGSPGQPGYPGQQGREGEKGYPGI 1167
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G +G GARG +G+ G G G +GL
Sbjct: 85 GDMGSKGARGDRGLPGSPGHPGLQGL 110
Score = 27.5 bits (58), Expect = 8.5
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLK 71
G G+PG G+ G++GR+G++
Sbjct: 201 GPYGLPGFPGVSGLKGRMGVR 221
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGLQ 89
G G PG G+ G +GR G G GLQ
Sbjct: 655 GLQGEPGLAGIDGKRGRQGSLGIPGLQ 681
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G G PG RGL G+ G+ G G G
Sbjct: 1318 GLPGYPGERGLPGLDGKRGHDGLPG 1342
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 233 bits (571), Expect = 6e-62
Identities = 110/214 (51%), Positives = 136/214 (63%), Gaps = 6/214 (2%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGLQXXXXXXXX-----XXXXXXXXXXXXFYFTIHSQ 173
G+ G PGA GL G +G GL GF GL F HSQ
Sbjct: 1480 GNDGYPGAPGLSGEKGMGGLPGFPGLDGQPGGPGAPGLPGAPGAAGPAYRDGFVLVKHSQ 1539
Query: 174 TRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFCNLNNVCDF 353
T +P+CP G + LW+G+SL++I N K+H QDLG GSCL++FSTMP++FC+ NNVC++
Sbjct: 1540 TTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNY 1599
Query: 354 AQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQSNTVPTCPNG 533
A R D S+WLST E +P M P+ R++ YISRC VCEAP TIAVHSQ+ +P CP G
Sbjct: 1600 ASRNDKSYWLSTSEAIP--MMPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAG 1657
Query: 534 WEELWIGYSFLMHT-AGADASGQSLISPGSCLRE 632
W LWIGYSF MHT AGA+ GQSL SPGSCL +
Sbjct: 1658 WSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLED 1691
Score = 84.6 bits (200), Expect = 5e-17
Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 7/113 (6%)
Frame = +3
Query: 162 IHSQTRLIPQCPAGTSSLWEGFSL-IHIVANGKAHGQDLGAPGSCLRKFSTMPYMFCN-L 335
+HSQT IP CPAG SSLW G+S +H A + GQ L +PGSCL F P++ CN
Sbjct: 1644 VHSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLEDFRATPFIECNGA 1703
Query: 336 NNVCDFAQREDYSFWLSTPE-----PMPMAMTPIQARDVGTYISRCQVCEAPT 479
C + + +SFWL+T + +P + T +++ ++ T +SRCQVC T
Sbjct: 1704 RGSCHYFANK-FSFWLTTIDNDSEFKVPESQT-LKSGNLRTRVSRCQVCVKST 1754
Score = 30.7 bits (66), Expect = 0.91
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G+PG GL G+ G G +GF GL
Sbjct: 994 GLPGLPGRDGLSGVPGMKGDRGFNGL 1019
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G +G PGA G G +G GL G G
Sbjct: 638 PSGPVGPPGAPGYPGEKGDAGLPGLSG 664
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G +G PGA GLQG G GL G +G
Sbjct: 1271 GPVGPPGAPGLQGKDGFPGLPGQKG 1295
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
GS+G PG +G G QG G G EGL
Sbjct: 45 GSMGAPGPQGPPGTQGIRGFPGPEGL 70
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G+PG G G++G GL G G
Sbjct: 974 PKGEPGVPGMPGTPGMKGNGGLPGLPG 1000
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G PG G +G G GLKG +GL
Sbjct: 841 GLPGTPGLEGQRGFPGAPGLKGGDGL 866
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G GIPG RG+ G G+ G G+ G
Sbjct: 1167 GLPGIPGDRGMDGYPGQKGENGYPG 1191
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
GS G PG GL GI G G GF G
Sbjct: 1215 GSPGYPGQDGLPGIPGLKGDSGFPG 1239
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGL 86
P+G G PG +G G G G KG GL
Sbjct: 1272 PVGPPGAPGLQGKDGFPGLPGQKGESGL 1299
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G G PG +GL GI G+ G +G G
Sbjct: 1071 GQPGQPGEKGLPGIPGKAGRQGAPG 1095
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G G PG RG QG G G+ GF+G
Sbjct: 1039 GLPGQPGLRGPQGPSGLPGVPGFKG 1063
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G PG GL G G G+KG +GL
Sbjct: 271 GQRGYPGNGGLSGQPGLPGMKGEKGL 296
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G+PG GL G G G KGF G+
Sbjct: 764 GDSGLPGPPGLPGHPGVPGDKGFGGV 789
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 233 bits (571), Expect = 6e-62
Identities = 110/214 (51%), Positives = 136/214 (63%), Gaps = 6/214 (2%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGLQXXXXXXXX-----XXXXXXXXXXXXFYFTIHSQ 173
G+ G PGA GL G +G GL GF GL F HSQ
Sbjct: 1481 GNDGYPGAPGLSGEKGMGGLPGFPGLDGQPGGPGAPGLPGAPGAAGPAYRDGFVLVKHSQ 1540
Query: 174 TRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFCNLNNVCDF 353
T +P+CP G + LW+G+SL++I N K+H QDLG GSCL++FSTMP++FC+ NNVC++
Sbjct: 1541 TTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNY 1600
Query: 354 AQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQSNTVPTCPNG 533
A R D S+WLST E +P M P+ R++ YISRC VCEAP TIAVHSQ+ +P CP G
Sbjct: 1601 ASRNDKSYWLSTSEAIP--MMPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAG 1658
Query: 534 WEELWIGYSFLMHT-AGADASGQSLISPGSCLRE 632
W LWIGYSF MHT AGA+ GQSL SPGSCL +
Sbjct: 1659 WSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLED 1692
Score = 84.6 bits (200), Expect = 5e-17
Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 7/113 (6%)
Frame = +3
Query: 162 IHSQTRLIPQCPAGTSSLWEGFSL-IHIVANGKAHGQDLGAPGSCLRKFSTMPYMFCN-L 335
+HSQT IP CPAG SSLW G+S +H A + GQ L +PGSCL F P++ CN
Sbjct: 1645 VHSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLEDFRATPFIECNGA 1704
Query: 336 NNVCDFAQREDYSFWLSTPE-----PMPMAMTPIQARDVGTYISRCQVCEAPT 479
C + + +SFWL+T + +P + T +++ ++ T +SRCQVC T
Sbjct: 1705 RGSCHYFANK-FSFWLTTIDNDSEFKVPESQT-LKSGNLRTRVSRCQVCVKST 1755
Score = 30.7 bits (66), Expect = 0.91
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G+PG GL G+ G G +GF GL
Sbjct: 995 GLPGLPGRDGLSGVPGMKGDRGFNGL 1020
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G +G PGA G G +G GL G G
Sbjct: 639 PSGPVGPPGAPGYPGEKGDAGLPGLSG 665
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G +G PGA GLQG G GL G +G
Sbjct: 1272 GPVGPPGAPGLQGKDGFPGLPGQKG 1296
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
GS+G PG +G G QG G G EGL
Sbjct: 45 GSMGAPGPQGPPGTQGIRGFPGPEGL 70
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G+PG G G++G GL G G
Sbjct: 975 PKGEPGVPGMPGTPGMKGNGGLPGLPG 1001
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G PG G +G G GLKG +GL
Sbjct: 842 GLPGTPGLEGQRGFPGAPGLKGGDGL 867
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G GIPG RG+ G G+ G G+ G
Sbjct: 1168 GLPGIPGDRGMDGYPGQKGENGYPG 1192
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
GS G PG GL GI G G GF G
Sbjct: 1216 GSPGYPGQDGLPGIPGLKGDSGFPG 1240
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGL 86
P+G G PG +G G G G KG GL
Sbjct: 1273 PVGPPGAPGLQGKDGFPGLPGQKGESGL 1300
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G G PG +GL GI G+ G +G G
Sbjct: 1072 GQPGQPGEKGLPGIPGKAGRQGAPG 1096
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G G PG RG QG G G+ GF+G
Sbjct: 1040 GLPGQPGLRGPQGPSGLPGVPGFKG 1064
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G PG GL G G G+KG +GL
Sbjct: 272 GQRGYPGNGGLSGQPGLPGMKGEKGL 297
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G+PG GL G G G KGF G+
Sbjct: 765 GDSGLPGPPGLPGHPGVPGDKGFGGV 790
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 229 bits (560), Expect = 1e-60
Identities = 108/214 (50%), Positives = 135/214 (63%), Gaps = 6/214 (2%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGLQXXXXXXXX-----XXXXXXXXXXXXFYFTIHSQ 173
G+ G PGA GL G +G GL GF GL F HSQ
Sbjct: 1481 GNDGYPGAPGLSGEKGMGGLPGFPGLDGQPGGPGAPGLPGAPGAAGPAYRDGFVLVKHSQ 1540
Query: 174 TRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFCNLNNVCDF 353
T +P+CP G + LW+G+SL++I N K+H QDLG GSCL++FSTMP++FC+ NNVC++
Sbjct: 1541 TTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNY 1600
Query: 354 AQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQSNTVPTCPNG 533
A R + S+WLST E +P M P+ R++ YISRC VCEAP TIAVHSQ+ +P CP G
Sbjct: 1601 ASRNEKSYWLSTSEAIP--MMPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAG 1658
Query: 534 WEELWIGYSFLMHT-AGADASGQSLISPGSCLRE 632
W LWIGYSF MHT AGA+ GQS SPGSCL +
Sbjct: 1659 WSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLED 1692
Score = 81.8 bits (193), Expect = 4e-16
Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Frame = +3
Query: 162 IHSQTRLIPQCPAGTSSLWEGFSL-IHIVANGKAHGQDLGAPGSCLRKFSTMPYMFCN-L 335
+HSQT IP CPAG SSLW G+S +H A + GQ +PGSCL F P++ CN
Sbjct: 1645 VHSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLEDFRATPFIECNGA 1704
Query: 336 NNVCDFAQREDYSFWLSTPE-----PMPMAMTPIQARDVGTYISRCQVCEAPT 479
C + + +SFWL+T + +P + T +++ ++ T +SRCQVC T
Sbjct: 1705 RGSCHYFANK-FSFWLTTIDNDSEFKVPESQT-LKSGNLRTRVSRCQVCVKST 1755
Score = 30.7 bits (66), Expect = 0.91
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G+PG GL G+ G G +GF GL
Sbjct: 995 GLPGLPGRDGLSGVPGMKGDRGFNGL 1020
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G +G PGA G G +G GL G G
Sbjct: 639 PSGPVGPPGAPGYPGEKGDAGLPGLSG 665
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G +G PGA GLQG G GL G +G
Sbjct: 1272 GPVGPPGAPGLQGKDGFPGLPGQKG 1296
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
GS+G PG +G G QG G G EGL
Sbjct: 45 GSMGAPGPQGPPGTQGIRGFPGPEGL 70
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G+PG G G++G GL G G
Sbjct: 975 PKGEPGVPGMPGTPGMKGNGGLPGLPG 1001
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G PG G +G G GLKG +GL
Sbjct: 842 GLPGTPGLEGQRGFPGAPGLKGGDGL 867
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G GIPG RG+ G G+ G G+ G
Sbjct: 1168 GLPGIPGDRGMDGYPGQKGENGYPG 1192
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
GS G PG GL GI G G GF G
Sbjct: 1216 GSPGYPGQDGLPGIPGLKGDSGFPG 1240
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGL 86
P+G G PG +G G G G KG GL
Sbjct: 1273 PVGPPGAPGLQGKDGFPGLPGQKGESGL 1300
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G G PG +GL GI G+ G +G G
Sbjct: 1072 GQPGQPGEKGLPGIPGKAGRQGAPG 1096
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G G PG RG QG G G+ GF+G
Sbjct: 1040 GLPGQPGLRGPQGPSGLPGVPGFKG 1064
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G PG GL G G G+KG +GL
Sbjct: 272 GQRGYPGNGGLSGQPGLPGMKGEKGL 297
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G+PG GL G G G KGF G+
Sbjct: 765 GDSGLPGPPGLPGHPGVPGDKGFGGV 790
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 229 bits (560), Expect = 1e-60
Identities = 108/214 (50%), Positives = 135/214 (63%), Gaps = 6/214 (2%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGLQXXXXXXXX-----XXXXXXXXXXXXFYFTIHSQ 173
G+ G PGA GL G +G GL GF GL F HSQ
Sbjct: 1480 GNDGYPGAPGLSGEKGMGGLPGFPGLDGQPGGPGAPGLPGAPGAAGPAYRDGFVLVKHSQ 1539
Query: 174 TRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFCNLNNVCDF 353
T +P+CP G + LW+G+SL++I N K+H QDLG GSCL++FSTMP++FC+ NNVC++
Sbjct: 1540 TTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNY 1599
Query: 354 AQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQSNTVPTCPNG 533
A R + S+WLST E +P M P+ R++ YISRC VCEAP TIAVHSQ+ +P CP G
Sbjct: 1600 ASRNEKSYWLSTSEAIP--MMPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAG 1657
Query: 534 WEELWIGYSFLMHT-AGADASGQSLISPGSCLRE 632
W LWIGYSF MHT AGA+ GQS SPGSCL +
Sbjct: 1658 WSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLED 1691
Score = 81.8 bits (193), Expect = 4e-16
Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Frame = +3
Query: 162 IHSQTRLIPQCPAGTSSLWEGFSL-IHIVANGKAHGQDLGAPGSCLRKFSTMPYMFCN-L 335
+HSQT IP CPAG SSLW G+S +H A + GQ +PGSCL F P++ CN
Sbjct: 1644 VHSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLEDFRATPFIECNGA 1703
Query: 336 NNVCDFAQREDYSFWLSTPE-----PMPMAMTPIQARDVGTYISRCQVCEAPT 479
C + + +SFWL+T + +P + T +++ ++ T +SRCQVC T
Sbjct: 1704 RGSCHYFANK-FSFWLTTIDNDSEFKVPESQT-LKSGNLRTRVSRCQVCVKST 1754
Score = 30.7 bits (66), Expect = 0.91
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G+PG GL G+ G G +GF GL
Sbjct: 994 GLPGLPGRDGLSGVPGMKGDRGFNGL 1019
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G +G PGA G G +G GL G G
Sbjct: 638 PSGPVGPPGAPGYPGEKGDAGLPGLSG 664
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G +G PGA GLQG G GL G +G
Sbjct: 1271 GPVGPPGAPGLQGKDGFPGLPGQKG 1295
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
GS+G PG +G G QG G G EGL
Sbjct: 45 GSMGAPGPQGPPGTQGIRGFPGPEGL 70
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G+PG G G++G GL G G
Sbjct: 974 PKGEPGVPGMPGTPGMKGNGGLPGLPG 1000
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G PG G +G G GLKG +GL
Sbjct: 841 GLPGTPGLEGQRGFPGAPGLKGGDGL 866
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G GIPG RG+ G G+ G G+ G
Sbjct: 1167 GLPGIPGDRGMDGYPGQKGENGYPG 1191
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
GS G PG GL GI G G GF G
Sbjct: 1215 GSPGYPGQDGLPGIPGLKGDSGFPG 1239
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGL 86
P+G G PG +G G G G KG GL
Sbjct: 1272 PVGPPGAPGLQGKDGFPGLPGQKGESGL 1299
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G G PG +GL GI G+ G +G G
Sbjct: 1071 GQPGQPGEKGLPGIPGKAGRQGAPG 1095
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G G PG RG QG G G+ GF+G
Sbjct: 1039 GLPGQPGLRGPQGPSGLPGVPGFKG 1063
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G PG GL G G G+KG +GL
Sbjct: 271 GQRGYPGNGGLSGQPGLPGMKGEKGL 296
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G+PG GL G G G KGF G+
Sbjct: 764 GDSGLPGPPGLPGHPGVPGDKGFGGV 789
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
protein.
Length = 1795
Score = 229 bits (560), Expect = 1e-60
Identities = 108/214 (50%), Positives = 135/214 (63%), Gaps = 6/214 (2%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGLQXXXXXXXX-----XXXXXXXXXXXXFYFTIHSQ 173
G+ G PGA GL G +G GL GF GL F HSQ
Sbjct: 1517 GNDGYPGAPGLSGEKGMGGLPGFPGLDGQPGGPGAPGLPGAPGAAGPAYRDGFVLVKHSQ 1576
Query: 174 TRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFCNLNNVCDF 353
T +P+CP G + LW+G+SL++I N K+H QDLG GSCL++FSTMP++FC+ NNVC++
Sbjct: 1577 TTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNY 1636
Query: 354 AQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQSNTVPTCPNG 533
A R + S+WLST E +P M P+ R++ YISRC VCEAP TIAVHSQ+ +P CP G
Sbjct: 1637 ASRNEKSYWLSTSEAIP--MMPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAG 1694
Query: 534 WEELWIGYSFLMHT-AGADASGQSLISPGSCLRE 632
W LWIGYSF MHT AGA+ GQS SPGSCL +
Sbjct: 1695 WSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLED 1728
Score = 81.8 bits (193), Expect = 4e-16
Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Frame = +3
Query: 162 IHSQTRLIPQCPAGTSSLWEGFSL-IHIVANGKAHGQDLGAPGSCLRKFSTMPYMFCN-L 335
+HSQT IP CPAG SSLW G+S +H A + GQ +PGSCL F P++ CN
Sbjct: 1681 VHSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLEDFRATPFIECNGA 1740
Query: 336 NNVCDFAQREDYSFWLSTPE-----PMPMAMTPIQARDVGTYISRCQVCEAPT 479
C + + +SFWL+T + +P + T +++ ++ T +SRCQVC T
Sbjct: 1741 RGSCHYFANK-FSFWLTTIDNDSEFKVPESQT-LKSGNLRTRVSRCQVCVKST 1791
Score = 30.7 bits (66), Expect = 0.91
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G+PG GL G+ G G +GF GL
Sbjct: 1031 GLPGLPGRDGLSGVPGMKGDRGFNGL 1056
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G +G PGA G G +G GL G G
Sbjct: 675 PSGPVGPPGAPGYPGEKGDAGLPGLSG 701
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G +G PGA GLQG G GL G +G
Sbjct: 1308 GPVGPPGAPGLQGKDGFPGLPGQKG 1332
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
GS+G PG +G G QG G G EGL
Sbjct: 45 GSMGAPGPQGPPGTQGIRGFPGPEGL 70
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G+PG G G++G GL G G
Sbjct: 1011 PKGEPGVPGMPGTPGMKGNGGLPGLPG 1037
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G PG G +G G GLKG +GL
Sbjct: 878 GLPGTPGLEGQRGFPGAPGLKGGDGL 903
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G GIPG RG+ G G+ G G+ G
Sbjct: 1204 GLPGIPGDRGMDGYPGQKGENGYPG 1228
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
GS G PG GL GI G G GF G
Sbjct: 1252 GSPGYPGQDGLPGIPGLKGDSGFPG 1276
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGL 86
P+G G PG +G G G G KG GL
Sbjct: 1309 PVGPPGAPGLQGKDGFPGLPGQKGESGL 1336
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G G PG +GL GI G+ G +G G
Sbjct: 1108 GQPGQPGEKGLPGIPGKAGRQGAPG 1132
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G G PG RG QG G G+ GF+G
Sbjct: 1076 GLPGQPGLRGPQGPSGLPGVPGFKG 1100
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G PG GL G G G+KG +GL
Sbjct: 308 GQRGYPGNGGLSGQPGLPGMKGEKGL 333
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G+PG GL G G G KGF G+
Sbjct: 801 GDSGLPGPPGLPGHPGVPGDKGFGGV 826
>J05066-1|AAA27989.1| 261|Caenorhabditis elegans alpha-2 (IV)
collagen protein.
Length = 261
Score = 222 bits (542), Expect = 2e-58
Identities = 105/209 (50%), Positives = 132/209 (63%), Gaps = 1/209 (0%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGLQXXXXXXXXXXXXXXXXXXXXFYFTIHSQTRLIP 188
G+ G+PG GL G G G G G F HSQT +P
Sbjct: 1 GNGGLPGFPGLDGQPGGPGAPGLPG-------------AAGPAYRDGFVLVKHSQTTEVP 47
Query: 189 QCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFCNLNNVCDFAQRED 368
+CP G + LW+G+SL++I N K+H QDLG GSCL++FSTMP++FC+ NNVC++A R +
Sbjct: 48 RCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNYASRNE 107
Query: 369 YSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQSNTVPTCPNGWEELW 548
S+WLST E +P M P+ R++ YISRC VCEAP TIAVHSQ+ +P CP GW LW
Sbjct: 108 KSYWLSTSEAIP--MMPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAGWSSLW 165
Query: 549 IGYSFLMHT-AGADASGQSLISPGSCLRE 632
IGYSF MHT AGA+ GQSL SPGSCL +
Sbjct: 166 IGYSFAMHTGAGAEGGGQSLSSPGSCLED 194
Score = 84.6 bits (200), Expect = 5e-17
Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 7/113 (6%)
Frame = +3
Query: 162 IHSQTRLIPQCPAGTSSLWEGFSL-IHIVANGKAHGQDLGAPGSCLRKFSTMPYMFCN-L 335
+HSQT IP CPAG SSLW G+S +H A + GQ L +PGSCL F P++ CN
Sbjct: 147 VHSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLEDFRATPFIECNGA 206
Query: 336 NNVCDFAQREDYSFWLSTPE-----PMPMAMTPIQARDVGTYISRCQVCEAPT 479
C + + +SFWL+T + +P + T +++ ++ T +SRCQVC T
Sbjct: 207 RGSCHYFANK-FSFWLTTIDNDSEFKVPESQT-LKSGNLRTRVSRCQVCVKST 257
>Z72507-3|CAA96625.1| 337|Caenorhabditis elegans Hypothetical
protein F17C11.3 protein.
Length = 337
Score = 33.1 bits (72), Expect = 0.17
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G+PG G++G +G GL+G EG+
Sbjct: 267 GRPGLPGTEGIRGYEGMSGLRGIEGV 292
Score = 30.7 bits (66), Expect = 0.91
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G+ G PG +G G+ G G++G+EG+
Sbjct: 258 GNEGQPGKKGRPGLPGTEGIRGYEGM 283
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGLQ 89
G++G PG G G +GR GL G EG++
Sbjct: 252 GAMGQPGNEGQPGKKGRPGLPGTEGIR 278
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGLQ 89
G G PG G +GI+G G+ G G++
Sbjct: 264 GKKGRPGLPGTEGIRGYEGMSGLRGIE 290
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 6 MGSIGIPGARGLQGIQGRVGLKGFEG 83
+GS G G RGL+G +GR G G G
Sbjct: 186 IGSDGPRGKRGLRGPRGRPGRPGING 211
>Z78201-2|CAB01588.1| 324|Caenorhabditis elegans Hypothetical
protein ZK836.1 protein.
Length = 324
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P GS G PG RG++G +G+ G G +G
Sbjct: 174 PQGSQGAPGIRGMRGARGQPGYPGRDG 200
>U12966-7|AAK84534.1| 352|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 17 protein.
Length = 352
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P GS G PGARG++G +G+ + G +G
Sbjct: 206 PPGSQGKPGARGMRGARGQAAMPGRDG 232
>AF465981-1|AAL76993.1| 324|Caenorhabditis elegans cuticle collagen
LON-3 protein.
Length = 324
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P GS G PG RG++G +G+ G G +G
Sbjct: 174 PQGSQGAPGIRGMRGARGQPGYPGRDG 200
>AF262406-1|AAL08218.1| 324|Caenorhabditis elegans cuticle collagen
protein LON-3 protein.
Length = 324
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P GS G PG RG++G +G+ G G +G
Sbjct: 174 PQGSQGAPGIRGMRGARGQPGYPGRDG 200
>AF039720-3|AAB96697.1| 281|Caenorhabditis elegans Collagen protein
54 protein.
Length = 281
Score = 32.3 bits (70), Expect = 0.30
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGLQ 89
P G IG PG G QG G VG G EG+Q
Sbjct: 207 PEGPIGEPGKDGQQGPHGDVGGDGTEGIQ 235
>Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical
protein AC3.6 protein.
Length = 325
Score = 31.9 bits (69), Expect = 0.40
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGL 86
PMG G PG GL G G VG+ G +G+
Sbjct: 151 PMGPQGQPGRPGLMGHPGDVGVTGMDGI 178
>AY494975-1|AAR87492.1| 486|Caenorhabditis elegans
collagen/olfactomedin domain containingprotein 2
protein.
Length = 486
Score = 31.5 bits (68), Expect = 0.52
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P+G +G PG G G QGR GL G G
Sbjct: 96 PVGPVGPPGKSGPAGPQGRRGLMGIPG 122
>AF000262-4|AAN60526.2| 486|Caenorhabditis elegans Colmedin
(collagen plus olfactomedin)family protein 2 protein.
Length = 486
Score = 31.5 bits (68), Expect = 0.52
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P+G +G PG G G QGR GL G G
Sbjct: 96 PVGPVGPPGKSGPAGPQGRRGLMGIPG 122
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.1 bits (67), Expect = 0.69
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G PG G G QG G KG++G
Sbjct: 167 PSGEDGAPGQEGAPGDQGEQGPKGYDG 193
>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 30.7 bits (66), Expect = 0.91
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGL 86
P G+ GIPG+ G G QG G G GL
Sbjct: 714 PSGNDGIPGSHGAPGHQGERGADGAPGL 741
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G+PGA G G G G +G +G
Sbjct: 779 PQGPPGLPGAPGRDGTSGVEGQRGPQG 805
>Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 30.7 bits (66), Expect = 0.91
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGL 86
P G+ GIPG+ G G QG G G GL
Sbjct: 317 PSGNDGIPGSHGAPGHQGERGADGAPGL 344
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G+PGA G G G G +G +G
Sbjct: 382 PQGPPGLPGAPGRDGTSGVEGQRGPQG 408
>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 30.7 bits (66), Expect = 0.91
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGL 86
P G+ GIPG+ G G QG G G GL
Sbjct: 677 PSGNDGIPGSHGAPGHQGERGADGAPGL 704
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G+PGA G G G G +G +G
Sbjct: 742 PQGPPGLPGAPGRDGTSGVEGQRGPQG 768
>Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical
protein C36B1.1c protein.
Length = 650
Score = 30.7 bits (66), Expect = 0.91
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGL 86
P G+ GIPG+ G G QG G G GL
Sbjct: 189 PSGNDGIPGSHGAPGHQGERGADGAPGL 216
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G+PGA G G G G +G +G
Sbjct: 254 PQGPPGLPGAPGRDGTSGVEGQRGPQG 280
>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 30.7 bits (66), Expect = 0.91
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGL 86
P G+ GIPG+ G G QG G G GL
Sbjct: 714 PSGNDGIPGSHGAPGHQGERGADGAPGL 741
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G+PGA G G G G +G +G
Sbjct: 779 PQGPPGLPGAPGRDGTSGVEGQRGPQG 805
>Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 30.7 bits (66), Expect = 0.91
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGL 86
P G+ GIPG+ G G QG G G GL
Sbjct: 317 PSGNDGIPGSHGAPGHQGERGADGAPGL 344
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G+PGA G G G G +G +G
Sbjct: 382 PQGPPGLPGAPGRDGTSGVEGQRGPQG 408
>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 30.7 bits (66), Expect = 0.91
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGL 86
P G+ GIPG+ G G QG G G GL
Sbjct: 677 PSGNDGIPGSHGAPGHQGERGADGAPGL 704
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G+PGA G G G G +G +G
Sbjct: 742 PQGPPGLPGAPGRDGTSGVEGQRGPQG 768
>AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protein
protein.
Length = 650
Score = 30.7 bits (66), Expect = 0.91
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGL 86
P G+ GIPG+ G G QG G G GL
Sbjct: 189 PSGNDGIPGSHGAPGHQGERGADGAPGL 216
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G+PGA G G G G +G +G
Sbjct: 254 PQGPPGLPGAPGRDGTSGVEGQRGPQG 280
>AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protein
protein.
Length = 778
Score = 30.7 bits (66), Expect = 0.91
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGL 86
P G+ GIPG+ G G QG G G GL
Sbjct: 317 PSGNDGIPGSHGAPGHQGERGADGAPGL 344
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G+PGA G G G G +G +G
Sbjct: 382 PQGPPGLPGAPGRDGTSGVEGQRGPQG 408
>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
protein.
Length = 1117
Score = 30.7 bits (66), Expect = 0.91
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGL 86
P G+ GIPG+ G G QG G G GL
Sbjct: 656 PSGNDGIPGSHGAPGHQGERGADGAPGL 683
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G+PGA G G G G +G +G
Sbjct: 721 PQGPPGLPGAPGRDGTSGVEGQRGPQG 747
>Z81499-2|CAB04088.1| 598|Caenorhabditis elegans Hypothetical
protein F11C3.2 protein.
Length = 598
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G +G PG RG GI G +GL G G+
Sbjct: 126 GPVGPPGRRGPMGIVGPIGLVGEHGI 151
>Z81052-6|CAB02874.1| 336|Caenorhabditis elegans Hypothetical
protein D2023.7 protein.
Length = 336
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P+G+ G PG G+ G QG G G EG
Sbjct: 246 PVGAAGAPGPDGINGFQGPGGPPGEEG 272
>Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical
protein T01B7.7 protein.
Length = 348
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G PG RG++G +G+ G G +G
Sbjct: 200 PQGPNGAPGLRGMRGARGQPGRPGRDG 226
>U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protein
58 protein.
Length = 305
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGL 86
P G +G PG RG G+ G G G +G+
Sbjct: 162 PAGPMGPPGPRGPPGVPGITGAPGLDGI 189
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Frame = +3
Query: 3 PMGSIGIPGAR---GLQGIQGRVGLKGFEG 83
P G G+PG GL GI GR G G+ G
Sbjct: 171 PRGPPGVPGITGAPGLDGIPGRHGTPGYPG 200
>U80441-8|AAB37656.1| 284|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 5 protein.
Length = 284
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G+PG G QG+ G G +G G
Sbjct: 144 PPGQDGLPGQEGFQGLPGDAGKRGTPG 170
>M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein (
C.elegans collagen (rol-6) gene, complete cds. ).
Length = 348
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G PG RG++G +G+ G G +G
Sbjct: 200 PQGPNGAPGLRGMRGARGQPGRPGRDG 226
>AY494976-1|AAR87493.1| 598|Caenorhabditis elegans UNC-122 protein.
Length = 598
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G +G PG RG GI G +GL G G+
Sbjct: 126 GPVGPPGRRGPMGIVGPIGLVGEHGI 151
>AL032634-3|CAE45092.1| 412|Caenorhabditis elegans Hypothetical
protein Y39G8C.4 protein.
Length = 412
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G GIPG +G +G G GL G+EG
Sbjct: 154 GDPGIPGNKGGKGNNGNPGLDGYEG 178
>AF003151-6|AAK18909.1| 314|Caenorhabditis elegans Collagen protein
52 protein.
Length = 314
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 5/34 (14%)
Frame = +3
Query: 3 PMGSIGIPGAR-----GLQGIQGRVGLKGFEGLQ 89
P+G +G PG GL G +GR G KG++G Q
Sbjct: 218 PVGPVGPPGNNKNRYIGLPGPRGRAGRKGYQGAQ 251
>AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen protein
115 protein.
Length = 393
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 18 GIPGARGLQGIQGRVGLKGFEG 83
G PG G++GIQG VG +G EG
Sbjct: 306 GPPGPPGVRGIQGGVGSRGAEG 327
>Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical
protein C44C10.1 protein.
Length = 300
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P GS G PG G QG QG VG G G
Sbjct: 239 PAGSPGAPGNPGSQGSQGPVGDNGAAG 265
>Z49907-2|CAA90084.1| 324|Caenorhabditis elegans Hypothetical
protein B0491.2 protein.
Length = 324
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G++G PG RGL G +G+ G G +G
Sbjct: 176 PPGALGRPGPRGLPGPRGQNGNPGRDG 202
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKG 74
P G G+PG GL G+ G G+ G
Sbjct: 128 PSGPKGVPGVPGLDGVPGLDGVPG 151
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGL 86
P+G G+ G G+ G GR G G +GL
Sbjct: 102 PIGPPGVSGEPGMDGANGRPGKPGLDGL 129
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGL 86
P G G PG +GL G QG G G +G+
Sbjct: 160 PPGPAGPPGPKGLPGPQGDAGTSGQDGV 187
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGL 86
P+G G+ G G+ G GR G G +GL
Sbjct: 102 PIGPPGVSGEPGMDGANGRPGKPGLDGL 129
>J03146-1|AAA65468.1| 324|Caenorhabditis elegans collagen protein.
Length = 324
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G++G PG RGL G +G+ G G +G
Sbjct: 176 PPGALGRPGPRGLPGPRGQNGNPGRDG 202
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKG 74
P G G+PG GL G+ G G+ G
Sbjct: 128 PSGPKGVPGVPGLDGVPGLDGVPG 151
>Z70271-3|CAA94234.1| 358|Caenorhabditis elegans Hypothetical
protein W08D2.6 protein.
Length = 358
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G +G PGARG++G G+ G G +G
Sbjct: 198 GPMGHPGARGMKGSDGQPGQPGKDG 222
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G G PG G G QG+VG GF G
Sbjct: 222 GDPGKPGEMGPNGFQGKVGPDGFPG 246
>Z68113-2|CAA92149.2| 327|Caenorhabditis elegans Hypothetical
protein E03G2.3 protein.
Length = 327
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 6 MGSIGIPGARGLQGIQGRVGLKGFEGL 86
+G G+PGA G QG+ G +G G GL
Sbjct: 210 IGERGLPGAPGAQGMMGPIGPPGQLGL 236
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G+ GIPG +G GI G+VG G G
Sbjct: 124 GNSGIPGLKGDTGIPGKVGEPGSTG 148
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
GS+G PG +G G G GLKG G+
Sbjct: 112 GSMGFPGQKGEGGNSGIPGLKGDTGI 137
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G+PG GL G G G KG +GL
Sbjct: 157 GMEGLPGTNGLPGAPGWPGSKGEDGL 182
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGLQ 89
GS G PG++G +G + G+ G +G+Q
Sbjct: 64 GSPGFPGSKGEKGDRSEDGMSGRDGMQ 90
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 6 MGSIGIPGARGLQGIQGRVGLKGF 77
+GS G+PG++G G G GL G+
Sbjct: 243 LGSAGLPGSKGEMGKDGIPGLPGW 266
>U33919-1|AAA96505.1| 327|Caenorhabditis elegans MEC-5 precursor
protein.
Length = 327
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 6 MGSIGIPGARGLQGIQGRVGLKGFEGL 86
+G G+PGA G QG+ G +G G GL
Sbjct: 210 IGERGLPGAPGAQGMMGPIGPPGQLGL 236
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G+ GIPG +G GI G+VG G G
Sbjct: 124 GNSGIPGLKGDTGIPGKVGEPGSTG 148
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
GS+G PG +G G G GLKG G+
Sbjct: 112 GSMGFPGQKGEGGNSGIPGLKGDTGI 137
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G+PG GL G G G KG +GL
Sbjct: 157 GMEGLPGTNGLPGAPGWPGSKGEDGL 182
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGLQ 89
GS G PG++G +G + G+ G +G+Q
Sbjct: 64 GSPGFPGSKGEKGDRSEDGMSGRDGMQ 90
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 6 MGSIGIPGARGLQGIQGRVGLKGF 77
+GS G+PG++G G G GL G+
Sbjct: 243 LGSAGLPGSKGEMGKDGIPGLPGW 266
>U33918-1|AAA96504.1| 327|Caenorhabditis elegans MEC-5 protein.
Length = 327
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 6 MGSIGIPGARGLQGIQGRVGLKGFEGL 86
+G G+PGA G QG+ G +G G GL
Sbjct: 210 IGERGLPGAPGAQGMMGPIGPPGQLGL 236
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G+ GIPG +G GI G+VG G G
Sbjct: 124 GNSGIPGLKGDTGIPGKVGEPGSTG 148
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
GS+G PG +G G G GLKG G+
Sbjct: 112 GSMGFPGQKGEGGNSGIPGLKGDTGI 137
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G+PG GL G G G KG +GL
Sbjct: 157 GMEGLPGTNGLPGAPGWPGSKGEDGL 182
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGLQ 89
GS G PG++G +G + G+ G +G+Q
Sbjct: 64 GSPGFPGSKGEKGDRSEDGMSGRDGMQ 90
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 6 MGSIGIPGARGLQGIQGRVGLKGF 77
+GS G+PG++G G G GL G+
Sbjct: 243 LGSAGLPGSKGEMGKDGIPGLPGW 266
>AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical
protein Y57A10A.11 protein.
Length = 458
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G+ GIPG GL G QG G G +G
Sbjct: 388 PRGAPGIPGKDGLGGDQGAPGEPGADG 414
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G++G PG G +G QG VG G +G
Sbjct: 320 PQGNLGGPGVFGEKGPQGPVGAPGQKG 346
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGL 86
G G PG RG QG +G G+ G +GL
Sbjct: 375 GPQGTPGPRGRQGPRGAPGIPGKDGL 400
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G +G PG +G +G +G+ G G G
Sbjct: 335 PQGPVGAPGQKGRRGEKGKDGEPGAPG 361
>AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen protein
49 protein.
Length = 283
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G +G PGA+G G+ G+ G G G
Sbjct: 217 PQGPLGEPGAQGEPGVDGKDGALGAPG 243
>Z68113-3|CAA92150.1| 333|Caenorhabditis elegans Hypothetical
protein E03G2.4 protein.
Length = 333
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G+PG GLQG G G G +G
Sbjct: 260 PPGQSGLPGMPGLQGKPGNDGYPGRDG 286
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G G+PG +GL G+ G +G G EG
Sbjct: 210 GGSGLPGDKGLPGLPGSMGPVGPEG 234
>Z68005-4|CAA91992.2| 430|Caenorhabditis elegans Hypothetical
protein F59F3.2 protein.
Length = 430
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
GS+G+PGARG G G+ G EG
Sbjct: 233 GSVGLPGARGDPGNNGKPAPPGPEG 257
>AY347577-1|AAP97871.1| 322|Caenorhabditis elegans COLlagen
structural gene, probablya critical component of the
embryonically derived outerlayer of the L1 cuticle (31.8
kD) (col-59) protein.
Length = 322
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 18 GIPGARGLQGIQGRVGLKGFEG 83
G PGA+G QG +G GL G +G
Sbjct: 188 GAPGAKGPQGPRGSPGLSGVDG 209
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGLQ 89
P G G PG G+ G +G G+ G G Q
Sbjct: 195 PQGPRGSPGLSGVDGRRGEPGMSGPAGTQ 223
>AC006665-1|AAF39908.1| 322|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 14 protein.
Length = 322
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 18 GIPGARGLQGIQGRVGLKGFEG 83
G PGA+G QG +G GL G +G
Sbjct: 188 GAPGAKGPQGPRGSPGLSGVDG 209
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGLQ 89
P G G PG G+ G +G G+ G G Q
Sbjct: 195 PQGPRGSPGLSGVDGRRGEPGMSGPAGTQ 223
>Z74037-4|CAA98490.1| 295|Caenorhabditis elegans Hypothetical
protein F57B7.3 protein.
Length = 295
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G PG G QG GR G G G
Sbjct: 175 PQGDAGTPGQPGQQGQDGRPGQNGRRG 201
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P GS+G PG G G GR G G G
Sbjct: 96 PAGSVGNPGQDGAPGNDGRPGAPGAPG 122
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGLQ 89
P G G PGA G QG GR G G G Q
Sbjct: 154 PKGPPGQPGAPGEQGPNGRPGAPGAPGPQ 182
>U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protein
110 protein.
Length = 304
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G PG RG G G GLKG G
Sbjct: 151 PAGEPGEPGPRGSPGNNGLPGLKGRRG 177
>U29244-13|AAC71083.1| 291|Caenorhabditis elegans Collagen protein
74 protein.
Length = 291
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G PG RG++G +G+ + G +G
Sbjct: 142 PQGPQGKPGVRGMRGARGQGAMPGRDG 168
>U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform a protein.
Length = 335
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGL 86
P+G+ G+PG G G+ G G +G+ G+
Sbjct: 232 PIGAPGMPGLPGRNGLTGGQGERGWPGV 259
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKG 74
P GS G PG GL G G+ G+ G
Sbjct: 111 PRGSSGTPGKPGLPGNAGKPGMPG 134
>U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform b protein.
Length = 372
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGL 86
P+G+ G+PG G G+ G G +G+ G+
Sbjct: 269 PIGAPGMPGLPGRNGLTGGQGERGWPGV 296
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKG 74
P GS G PG GL G G+ G+ G
Sbjct: 148 PRGSSGTPGKPGLPGNAGKPGMPG 171
>U21318-2|AAC46668.1| 285|Caenorhabditis elegans Collagen protein
75 protein.
Length = 285
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
GS G+PG GL G G G+KG G
Sbjct: 178 GSPGLPGFAGLPGSIGITGIKGVMG 202
>L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein.
Length = 356
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGL 86
P+G+ G+PG G G+ G G +G+ G+
Sbjct: 253 PIGAPGMPGLPGRNGLTGGQGERGWPGV 280
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKG 74
P GS G PG GL G G+ G+ G
Sbjct: 132 PRGSSGTPGKPGLPGNAGKPGMPG 155
>L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protein
91 protein.
Length = 278
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P+GS G PG+ G G G G G +G
Sbjct: 215 PVGSDGQPGSAGAPGAPGPAGAPGVDG 241
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEGLQ 89
GS+G+PG G G++G G +G G Q
Sbjct: 504 GSLGLPGPPGPMGLRGPHGTEGETGKQ 530
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G PG++G +G +G +G GF G
Sbjct: 118 PRGLPGTPGSKGDRGERGPLGPPGFPG 144
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGLQ 89
P G G PG+ GL G G +GL+G G +
Sbjct: 496 PPGLPGQPGSLGLPGPPGPMGLRGPHGTE 524
>Z81104-3|CAD89749.1| 660|Caenorhabditis elegans Hypothetical
protein M199.5 protein.
Length = 660
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G+ G PGA+G +G +G G KG +G
Sbjct: 313 GADGTPGAKGDKGDKGADGAKGADG 337
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G+ G PGA+G +G +G G KG +G
Sbjct: 364 GANGTPGAKGDKGEKGTDGAKGADG 388
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G+ G PGA+G +G +G G KG +G
Sbjct: 409 GADGTPGAKGDKGEKGADGAKGADG 433
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G+ G PGA+G +G +G G KG +G
Sbjct: 472 GADGTPGAKGDKGEKGADGAKGADG 496
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVGLKGFEG 83
G G PGA+G +G G+ G KG G
Sbjct: 127 GDKGAPGAKGSKGDDGKKGDKGSSG 151
>Z73425-5|CAA97787.1| 427|Caenorhabditis elegans Hypothetical
protein F12F6.9 protein.
Length = 427
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGF 77
P+G G PG RG +G G+ + GF
Sbjct: 163 PVGPSGPPGRRGRKGADGKSAMGGF 187
>Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical
protein C30F2.1 protein.
Length = 307
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
PMG+ G PG RGL G G G G G
Sbjct: 236 PMGARGEPGHRGLPGDNGMPGPMGPPG 262
>U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen protein
113 protein.
Length = 348
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G PG +G G GR G +G +G
Sbjct: 225 PKGDSGPPGQKGPSGYPGRDGQRGNDG 251
>U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 8 protein.
Length = 452
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 18 GIPGARGLQGIQGRVGLKGFEGLQ 89
G PG RG QG +G G G G+Q
Sbjct: 144 GPPGPRGAQGERGMTGNPGMAGMQ 167
>U40060-2|AAP82656.1| 108|Caenorhabditis elegans Collagen protein
172, isoform b protein.
Length = 108
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G+PG G +G +G GL G +G
Sbjct: 35 PAGPPGLPGTPGKRGARGMDGLPGPQG 61
>U40060-1|AAA81141.1| 341|Caenorhabditis elegans Collagen protein
172, isoform a protein.
Length = 341
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G+PG G +G +G GL G +G
Sbjct: 268 PAGPPGLPGTPGKRGARGMDGLPGPQG 294
>U39644-7|AAO44908.1| 307|Caenorhabditis elegans Collagen protein
171 protein.
Length = 307
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P+GS G PG+ G G QG G G G
Sbjct: 243 PVGSAGTPGSPGNPGSQGPQGSAGDNG 269
>L23651-12|AAA27958.1| 305|Caenorhabditis elegans Collagen protein
90 protein.
Length = 305
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G PG G G +G G KGF+G
Sbjct: 167 PSGDDGQPGPAGPLGDKGAQGPKGFDG 193
>AL032632-7|CAA21586.1| 313|Caenorhabditis elegans Hypothetical
protein Y11D7A.11 protein.
Length = 313
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G+ G PG G+ G GR G G +G
Sbjct: 182 PQGNSGRPGMDGMPGRNGRCGRPGEQG 208
>AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen
protein 116 protein.
Length = 313
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P G G PG G G +G++G+ G G
Sbjct: 155 PAGPPGAPGPNGPPGYEGQMGVPGLPG 181
>AC024751-12|ABF71717.1| 301|Caenorhabditis elegans Collagen
protein 47 protein.
Length = 301
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 9 GSIGIPGARGLQGIQGRVG 65
G GIPG+RGL G+ G G
Sbjct: 95 GLDGIPGSRGLNGMDGEAG 113
>Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical
protein K02B12.3 protein.
Length = 425
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 237 HIVANGKAHGQDLGAPGSCLRKFSTMPYMFCNLNNVCDF 353
H+ G A+ QD+G C+ KF T N++ C F
Sbjct: 53 HLFTTGSAN-QDVGFQSKCVGKFDTGSMATMNMDVACAF 90
>Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.1 protein.
Length = 297
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGLQ 89
P G G PG RG+ GI GR G + ++
Sbjct: 108 PPGPPGHPGQRGIPGIPGRNGQDNYNTIR 136
>Z69662-1|CAA93499.1| 359|Caenorhabditis elegans Hypothetical
protein F56D5.1 protein.
Length = 359
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEGL 86
P+G G PG G G G+ G G EG+
Sbjct: 98 PIGEEGSPGNDGQPGTPGKPGSPGLEGV 125
>U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protein
166, isoform b protein.
Length = 301
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P GS G PG G QG QG G G G
Sbjct: 240 PAGSPGAPGNPGSQGPQGPAGDNGGAG 266
>U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protein
166, isoform a protein.
Length = 363
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P GS G PG G QG QG G G G
Sbjct: 302 PAGSPGAPGNPGSQGPQGPAGDNGGAG 328
>U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protein
170 protein.
Length = 300
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P GS G PG G QG QG G G G
Sbjct: 239 PAGSPGAPGNPGSQGPQGPAGDNGGAG 265
>U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protein
169 protein.
Length = 300
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P GS G PG G QG QG G G G
Sbjct: 239 PAGSPGAPGNPGSQGPQGPAGDNGGAG 265
>U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protein
168 protein.
Length = 301
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P GS G PG G QG QG G G G
Sbjct: 240 PAGSPGAPGNPGSQGPQGPAGDNGGAG 266
>U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protein
167 protein.
Length = 301
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +3
Query: 3 PMGSIGIPGARGLQGIQGRVGLKGFEG 83
P GS G PG G QG QG G G G
Sbjct: 240 PAGSPGAPGNPGSQGPQGPAGDNGGAG 266
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,856,231
Number of Sequences: 27780
Number of extensions: 313402
Number of successful extensions: 1907
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1844
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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