Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_O24
(659 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 63 4e-11
SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|c... 26 4.2
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 26 4.2
SPCC1442.07c |||ubiquitin/metalloprotease fusion protein|Schizos... 26 4.2
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 25 7.3
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 25 7.3
SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|... 25 7.3
SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomy... 25 7.3
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 62.9 bits (146), Expect = 4e-11
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 12/168 (7%)
Frame = +1
Query: 76 ADDGGEWETVRKGAATSD---KPKMFAKDSDIDAALVVKKLGEISAARGRKRTDRRAQLE 246
A G+ E + G AT + K +I A + K L I ARG+K TDR Q+
Sbjct: 297 AGKAGQDEVIVDGVATRGIVAPTEGLGKPEEITPADIFKYLRAIFEARGKKSTDRSEQIR 356
Query: 247 LLHELRTVALQHNLGDALQLKLRAAIVAALFDYNPKVSDAMKPEYWSRLVENVDHMVTLL 426
LL +L T+A+ D +L+++ A++A FD N M + W+ + + ++ +
Sbjct: 357 LLEKLSTIAVT----DYQRLRVKVALLAVRFDINTGSGQYMPIDQWNAALTELHSILDIF 412
Query: 427 LAHDDMILSEAITEENEQLV---------TPPYHVRGCLLTALERLDD 543
A+ +++ E + +ENE+ V+G +++ LERLDD
Sbjct: 413 DANPKIVIVEQVEDENEEEEEAIAAAENNNGVIQVQGSVVSFLERLDD 460
Score = 30.7 bits (66), Expect = 0.19
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +2
Query: 545 EFIKLLKECDPHSNEYVERLKEK 613
EF + L+ DPH+ EY++RLK++
Sbjct: 461 EFTRSLQMIDPHTPEYIDRLKDE 483
>SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 658
Score = 26.2 bits (55), Expect = 4.2
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +1
Query: 244 ELLH-ELRTVALQHNLGDALQLKLRAAIVAALFDYNPKVSDAMKPEYW--SRLVENVDHM 414
E LH EL+ LG+ + + R ++ + Y +S EYW SR VD
Sbjct: 347 ERLHYELQVSGKSFRLGEVVPITFRFLLLDKVRLYKLSISVVESSEYWCRSRKFHRVDPK 406
Query: 415 VTLLLA 432
+LLA
Sbjct: 407 RRVLLA 412
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 26.2 bits (55), Expect = 4.2
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 64 KRDQADDGGEWETVRKGAATSDKPKMFAKDSDIDAALVVKK 186
++++ ++ E E +K + K A D+DIDAAL K+
Sbjct: 259 EKEEKENTEETEESKKSINPTGTSKALALDADIDAALTDKE 299
>SPCC1442.07c |||ubiquitin/metalloprotease fusion
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 282
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 253 HELRTVALQHNLGDALQLKLRAAIVAALFDY 345
H+ +T+ L HN G ++L+LR DY
Sbjct: 163 HDSKTLGLNHNQGAHIELRLRTDRYDGFRDY 193
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 25.4 bits (53), Expect = 7.3
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +1
Query: 226 DRRAQLELLH-ELRTVALQHNLGDALQLKLRAAIVAALFDYNP-KVSDAMKPEYWSRLVE 399
+ R + L+H E T L D L+L + A +Y V + EYW LV
Sbjct: 6 ESRKRRRLIHSEKETRRLDLGEEDDLELFQKEAAWRRSREYEHLTVLEKKLYEYWESLVL 65
Query: 400 NVDHMVTLLLAHDDMILSE 456
+DH V L + + E
Sbjct: 66 KLDHYVAAALENHEQSFEE 84
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 25.4 bits (53), Expect = 7.3
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 328 AALFDYNPKVSDAMKPEYWSRLVENVDHMVTLLLAHDDMILSEAITEENEQLVTP 492
AAL P A +Y +R D +TL + DD +S TE +++ P
Sbjct: 125 AALLLREPNTYYAKVRDYIARYANKEDADITLNDSSDDDTMSSIDTESGDEIAGP 179
>SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 397
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 125 EVAAPFLTVSHSPPSSA*SRLLIFP 51
+VA+P TVSHSP S + R + P
Sbjct: 103 QVASPAYTVSHSPHSFSNPRYVAVP 127
>SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2052
Score = 25.4 bits (53), Expect = 7.3
Identities = 18/64 (28%), Positives = 27/64 (42%)
Frame = +1
Query: 352 KVSDAMKPEYWSRLVENVDHMVTLLLAHDDMILSEAITEENEQLVTPPYHVRGCLLTALE 531
K+ + + S L +N D + +D E TEE E+ V H+RG L E
Sbjct: 1290 KIMQQFRDQQASFLAQNTDFDIG-----EDQTEDEVTTEEPEEEVKYHEHIRGNCLLCQE 1344
Query: 532 RLDD 543
+D
Sbjct: 1345 ECND 1348
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,410,916
Number of Sequences: 5004
Number of extensions: 45141
Number of successful extensions: 157
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 299817502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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