Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_O24
         (659 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   2.0  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    23   2.6  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    21   7.9  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +1

Query: 73  QADDGGEWETVRKGAATSDKPKMFAKDSDIDAALVVKKL 189
           Q+DDGG      K   T     +F  +  I+    +KKL
Sbjct: 441 QSDDGGPLSLKNKVETTHSGTSLFRINLGIECGYEIKKL 479


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 466 EENEQLVTPPYHVRGCLLTALERLDD 543
           +EN +L   P  V  C+L AL+  D+
Sbjct: 206 KENSRLALKPKDVSNCVLFALQTPDN 231


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = +1

Query: 157 DIDAALVVKKLGEISAARGRKRTDRRAQLELLHELRTVALQ 279
           D D    ++ +  +++    K   RRA L  LH   T+  Q
Sbjct: 398 DEDQKCSIESITSVNSTSSPKPFPRRATLAQLHNFTTMTPQ 438


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,632
Number of Sequences: 438
Number of extensions: 2909
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)