Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_O22
(542 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1313 - 29252335-29252446,29253430-29253671,29253770-292538... 30 1.0
02_02_0322 - 8938101-8938149,8938235-8938458,8938545-8938605,893... 29 1.8
12_02_1265 - 27435096-27437675 29 2.4
09_06_0346 + 22435164-22435491,22435990-22436114,22436402-224365... 29 2.4
07_03_0041 + 12727924-12728250 29 2.4
07_01_0553 - 4119782-4119988,4120160-4120320,4120861-4121155 29 2.4
06_01_0771 - 5768086-5768090,5768905-5769156,5769282-5769660 28 4.2
10_08_0633 + 19446075-19446488,19446607-19446975,19447961-194480... 27 9.7
10_02_0166 - 6065088-6065093,6066671-6068544,6068643-6069548,606... 27 9.7
10_02_0129 + 5584585-5584732,5586567-5586968,5587038-5587106,558... 27 9.7
09_02_0469 - 9610883-9611338,9611749-9611871,9612199-9612375,961... 27 9.7
06_03_0107 + 16709543-16709640,16712555-16713408,16715051-167151... 27 9.7
>06_03_1313 - 29252335-29252446,29253430-29253671,29253770-29253848,
29254991-29255130,29255262-29255571,29255810-29255952,
29256106-29256306,29256453-29256581,29256921-29257199,
29258036-29259720,29261255-29261764,29261901-29262108,
29264347-29264458,29264594-29264763
Length = 1439
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +2
Query: 44 RRNDMLEKRFTCYLSYISSTAHS--RPWTMRAKRSADDEPLWLFKDNNEPR 190
RRND+ E +TC+ YI P R A D P L D+ E R
Sbjct: 916 RRNDVEEAEYTCFKCYIEEFKRGLRMPLPESVVRGAKDLPRTLLSDHIEER 966
>02_02_0322 -
8938101-8938149,8938235-8938458,8938545-8938605,
8938724-8940761,8940797-8940908,8942037-8942047,
8942293-8942443
Length = 881
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +2
Query: 179 NEPRAPSTGDHPVLPSIIDDIKLNPNTRYARSLSTPNKYHGGSHTISKSSQSTGPTHPG 355
+ PRA TGD I K+N R+ N Y + K+ + GP +PG
Sbjct: 710 DHPRAVKTGDSFFTNLIKKSFKINNGMGNGRAKVFINGYPISDRAVRKAEKIAGPIYPG 768
>12_02_1265 - 27435096-27437675
Length = 859
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +2
Query: 182 EPRAPSTGDHPVLPSIIDDIKLNPNTRYARSLSTPNKYHGGSHTISKSSQST 337
EP + +T +HP P ++ + + P+ + ARS+S G +T + +ST
Sbjct: 99 EPASGNTSNHPRTPQVLGNDYVQPSKQTARSISHSAIAGAGVYTELVNLKST 150
>09_06_0346 +
22435164-22435491,22435990-22436114,22436402-22436514,
22436919-22437023,22437147-22437531,22437645-22437776,
22437980-22438450,22438550-22439278,22439579-22439767
Length = 858
Score = 29.1 bits (62), Expect = 2.4
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = +2
Query: 116 PWTMRAKRSADDEPLWLFKDNNEPRAPSTGDHPVLPSIIDD--IKLNPNTRYARSLSTPN 289
PW MR K +AD +F +N+P+ + GD ++ D + + +RSL+ N
Sbjct: 602 PWRMRIKIAADICTALIFLHSNKPKGIAHGDLKPDNILLGDNFVGKLGDFGISRSLNLTN 661
Query: 290 KYHGGSHTISKSSQSTGPTHPGY 358
H ++ + G PGY
Sbjct: 662 TTITPYHQTNQIKGTLGYMDPGY 684
>07_03_0041 + 12727924-12728250
Length = 108
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +2
Query: 134 KRSADDEPLWLFKDNNEPRAPSTGDH--PVLPSIIDDIKLNPNTRYARSLSTP 286
K S PLW KD+ T D PVL +D PN R+ SL+TP
Sbjct: 6 KASPSSPPLWRQKDSLFRWVAITKDPLGPVLEQCLDIPTTLPNLRHNASLNTP 58
>07_01_0553 - 4119782-4119988,4120160-4120320,4120861-4121155
Length = 220
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 354 VTTDVMYVVSIRVAVSIMVEALRRLVVARTPAKLIQATTAVMLSL 488
V T ++ V+I AV V A+RR +ARTPA L ++ L
Sbjct: 54 VATQLVVTVAIAAAV-YSVPAIRRFFLARTPASLAAFVLVIVAPL 97
>06_01_0771 - 5768086-5768090,5768905-5769156,5769282-5769660
Length = 211
Score = 28.3 bits (60), Expect = 4.2
Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +2
Query: 53 DMLEKRFTCYLSYISSTAHSRPWTMRAKRSADDEPLWLFKDNNEPRAPSTGDH-PVLPS 226
D+ TC SY +S A WT + R D NEP TGDH P LPS
Sbjct: 93 DLATTYITCRGSYAASVAQ---WTQQLIRGVPPH------DCNEPCGVDTGDHPPPLPS 142
>10_08_0633 +
19446075-19446488,19446607-19446975,19447961-19448054,
19448137-19448174,19448770-19448916,19449580-19449679,
19449786-19450744,19451143-19451295
Length = 757
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +2
Query: 146 DDEPLWLFKDNNEPRAPSTGDHPVLPSIIDDIKLNPNTRYARSL 277
DDEP W + N EP P LP +DDI+L SL
Sbjct: 591 DDEPKWDNQPNWEPETPID-----LPGPLDDIELGLTKELVPSL 629
>10_02_0166 -
6065088-6065093,6066671-6068544,6068643-6069548,
6069623-6069676,6069751-6069808
Length = 965
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +1
Query: 46 PKRHVGEEIYLLFILHIVHGPQSALD 123
P +H E+Y + + H++HGP L+
Sbjct: 556 PNKHKYPELYEMVVKHMMHGPCGTLN 581
>10_02_0129 +
5584585-5584732,5586567-5586968,5587038-5587106,
5587181-5587234,5587309-5588214,5588313-5590283,
5590833-5591235,5591845-5591857
Length = 1321
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +1
Query: 46 PKRHVGEEIYLLFILHIVHGPQSALD 123
P +H E+Y + + H++HGP L+
Sbjct: 743 PNKHKYPELYEMVVKHMMHGPCGTLN 768
>09_02_0469 -
9610883-9611338,9611749-9611871,9612199-9612375,
9614416-9614501,9615519-9615678,9616122-9617438,
9619463-9620428,9621452-9621766
Length = 1199
Score = 27.1 bits (57), Expect = 9.7
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 99 PRPTVGP-GLCGLNEARMMNLYGCSKTTTSPVHRLLEITRYC 221
P T P L L + R +NL GCSK + P+ L C
Sbjct: 623 PEVTSFPESLENLTKLRFLNLSGCSKLSALPIRFLESFASLC 664
>06_03_0107 +
16709543-16709640,16712555-16713408,16715051-16715193,
16715312-16715573,16715835-16716150,16716257-16716383,
16717088-16717149,16717291-16717374,16717438-16717494,
16717705-16717768,16718057-16718152
Length = 720
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 61 GEEIYLLFILHIVHGPQS 114
GE YL +LHIV GP+S
Sbjct: 143 GEAYYLRMLLHIVKGPRS 160
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,956,786
Number of Sequences: 37544
Number of extensions: 291159
Number of successful extensions: 840
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1210221432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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