Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_O22
         (542 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC067300-1|AAH67300.1|  350|Homo sapiens USP40 protein protein.        31   2.0  
AJ583821-1|CAE47748.2| 1247|Homo sapiens ubiquitin specific prot...    31   2.0  
BC107127-1|AAI07128.1|  431|Homo sapiens astacin-like metallo-en...    31   3.4  
BC107126-1|AAI07127.1|  430|Homo sapiens ASTL protein protein.         31   3.4  
AJ537600-1|CAD61265.2|  431|Homo sapiens oocyte astacin protein.       31   3.4  

>BC067300-1|AAH67300.1|  350|Homo sapiens USP40 protein protein.
          Length = 350

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +2

Query: 74  TCYLSYISSTAHSRPWTMRAKRSADDEPLWLFKDNNEPRA 193
           TCYL+ +  T H  P    A  S   E L LF+D ++P A
Sbjct: 81  TCYLNSLLQTLHFTPEFREALFSLGPEELGLFEDKDKPDA 120


>AJ583821-1|CAE47748.2| 1247|Homo sapiens ubiquitin specific
           proteinase 40 protein.
          Length = 1247

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +2

Query: 74  TCYLSYISSTAHSRPWTMRAKRSADDEPLWLFKDNNEPRA 193
           TCYL+ +  T H  P    A  S   E L LF+D ++P A
Sbjct: 61  TCYLNSLLQTLHFTPEFREALFSLGPEELGLFEDKDKPDA 100


>BC107127-1|AAI07128.1|  431|Homo sapiens astacin-like
           metallo-endopeptidase (M12 family) protein.
          Length = 431

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +3

Query: 63  RRDLPVIYPTYRPRPTVGP--GLCGLNEARMMNLYGCSKTTTSP 188
           RR LP I P + P   +G    L   +  R++ LYGCS +   P
Sbjct: 245 RRGLPTITPLWAPSVHIGQRWNLSASDITRVLQLYGCSPSGPRP 288


>BC107126-1|AAI07127.1|  430|Homo sapiens ASTL protein protein.
          Length = 430

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +3

Query: 63  RRDLPVIYPTYRPRPTVGP--GLCGLNEARMMNLYGCSKTTTSP 188
           RR LP I P + P   +G    L   +  R++ LYGCS +   P
Sbjct: 244 RRGLPTITPLWAPSVHIGQRWNLSASDITRVLQLYGCSPSGPRP 287


>AJ537600-1|CAD61265.2|  431|Homo sapiens oocyte astacin protein.
          Length = 431

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +3

Query: 63  RRDLPVIYPTYRPRPTVGP--GLCGLNEARMMNLYGCSKTTTSP 188
           RR LP I P + P   +G    L   +  R++ LYGCS +   P
Sbjct: 245 RRGLPTITPLWAPSVHIGQRWNLSASDITRVLKLYGCSPSGPRP 288


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,635,761
Number of Sequences: 237096
Number of extensions: 1549193
Number of successful extensions: 3255
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3255
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)