Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_O20
         (254 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81586-1|CAB04690.1|  579|Caenorhabditis elegans Hypothetical pr...    25   7.4  
AC006629-11|ABC48256.1|  312|Caenorhabditis elegans Hypothetical...    25   7.4  
U97407-1|AAB52478.2|  411|Caenorhabditis elegans Hypothetical pr...    25   9.8  
AF016681-2|AAY55841.1|  184|Caenorhabditis elegans Hypothetical ...    25   9.8  

>Z81586-1|CAB04690.1|  579|Caenorhabditis elegans Hypothetical
           protein T05F1.2 protein.
          Length = 579

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -2

Query: 124 IDQIKRHLLFTYIHTYAHACFPRRVR 47
           I Q K+++LFT IH    AC   R R
Sbjct: 549 ISQDKKNILFTAIHNEKFACELARFR 574


>AC006629-11|ABC48256.1|  312|Caenorhabditis elegans Hypothetical
           protein F12E12.7 protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 106 GALFDQFKSDSQ*SNLLNVQSLNTRWRCTTYN 201
           G  FD   S    S+ L VQ+ +T+W  T+Y+
Sbjct: 70  GRPFDYVLSPGYSSSRLEVQTQHTQWYLTSYS 101


>U97407-1|AAB52478.2|  411|Caenorhabditis elegans Hypothetical
           protein C34G6.5 protein.
          Length = 411

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
 Frame = -1

Query: 182 HLVFKL*--TFNKLLH*ES-DLN*SNKAPPLIYIHTYICSR 69
           HL F L   T  K+ H E   +  S K PP  Y H  +C R
Sbjct: 270 HLAFLLGSETIEKMAHSEGLRVTLSEKLPPADYYHLILCLR 310


>AF016681-2|AAY55841.1|  184|Caenorhabditis elegans Hypothetical
           protein F22E5.21 protein.
          Length = 184

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 169 NFERLINYFIENPI*IDQIKRHLL 98
           N ER+INY +EN + +    R +L
Sbjct: 8   NVERIINYIVENDMHVTNSDRAVL 31


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,977,324
Number of Sequences: 27780
Number of extensions: 83259
Number of successful extensions: 133
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 133
length of database: 12,740,198
effective HSP length: 63
effective length of database: 10,990,058
effective search space used: 230791218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)