Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_O17
         (606 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC069071-1|AAH69071.1|  472|Homo sapiens zinc finger, imprinted ...    32   1.8  
BC114503-1|AAI14504.1|  472|Homo sapiens zinc finger, imprinted ...    31   3.1  
BC114446-1|AAI14447.1|  472|Homo sapiens zinc finger, imprinted ...    31   3.1  
AF365931-1|AAL11635.1|  472|Homo sapiens Kruppel-type zinc-finge...    31   3.1  

>BC069071-1|AAH69071.1|  472|Homo sapiens zinc finger, imprinted 3
           protein.
          Length = 472

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -2

Query: 575 HYIENSELNSNDVRKFSGERPNQSAAEAMDCN 480
           HY++N+  + N  RK  G+ P++   + + CN
Sbjct: 139 HYVQNNSHDDNGYRKLVGDNPSKFVGQQLKCN 170


>BC114503-1|AAI14504.1|  472|Homo sapiens zinc finger, imprinted 3
           protein.
          Length = 472

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -2

Query: 575 HYIENSELNSNDVRKFSGERPNQSAAEAMDCN 480
           HY++N+  + N  RK  G  P++   + + CN
Sbjct: 139 HYVQNNSHDDNGYRKLVGNNPSKFVGQQLKCN 170


>BC114446-1|AAI14447.1|  472|Homo sapiens zinc finger, imprinted 3
           protein.
          Length = 472

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -2

Query: 575 HYIENSELNSNDVRKFSGERPNQSAAEAMDCN 480
           HY++N+  + N  RK  G  P++   + + CN
Sbjct: 139 HYVQNNSHDDNGYRKLVGNNPSKFVGQQLKCN 170


>AF365931-1|AAL11635.1|  472|Homo sapiens Kruppel-type zinc-finger
           protein ZIM3 protein.
          Length = 472

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -2

Query: 575 HYIENSELNSNDVRKFSGERPNQSAAEAMDCN 480
           HY++N+  + N  RK  G  P++   + + CN
Sbjct: 139 HYVQNNSHDDNGYRKLVGNNPSKFVGQQLKCN 170


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,593,350
Number of Sequences: 237096
Number of extensions: 1702213
Number of successful extensions: 3212
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3212
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)