Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_O13
         (594 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    48   7e-06
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    47   1e-05
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    43   2e-04
AF003134-1|AAB54144.1|  522|Caenorhabditis elegans Trypsin-like ...    35   0.038
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    35   0.050
Z81575-6|CAB04633.1|  344|Caenorhabditis elegans Hypothetical pr...    34   0.088
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    33   0.20 
U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like pr...    31   0.62 
U39848-2|AAT81211.1|  279|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z78543-3|CAB01755.2|  772|Caenorhabditis elegans Hypothetical pr...    28   5.8  

>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 47.6 bits (108), Expect = 7e-06
 Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 4/119 (3%)
 Frame = +2

Query: 230 PWLVLLEYYRRGRKTEIR-CGATLISSKHVITAAHCVKK-AKFTSLVARLGEYDTSKETD 403
           PW   L    R + T+   CGA+++   H+ITAAHC ++  + +S    +G++D + +TD
Sbjct: 39  PWTAAL----RNKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEVVVGDWD-NNQTD 93

Query: 404 CVQDVCADPVVLIKVAEIIPHPDYID-SENDIAVLKLEHDA-PYTDFIRPICLPSGGLV 574
             + +         +  I  +P Y D   +DIA+L++ +    + ++ +PICLPS   V
Sbjct: 94  GNEQI-------FYLQRIHFYPLYKDIFSHDIAILEIPYPGIEFNEYAQPICLPSKDFV 145


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 15/77 (19%)
 Frame = +2

Query: 158 NITVNIN--DDDSCGVEAS-TSLI------------HHNPWLVLLEYYRRGRKTEIRCGA 292
           N+ +N N  DD+ CG +++ TS +            H  PW V +    R    E+ CG 
Sbjct: 5   NVDINSNNLDDELCGRQSTYTSFMLTDAAGNTGNPTHLAPWAVQIRVKARKGDFEVICGG 64

Query: 293 TLISSKHVITAAHCVKK 343
           TLI+ KHV+TAAHC +K
Sbjct: 65  TLITLKHVLTAAHCFQK 81


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 38/126 (30%), Positives = 53/126 (42%), Gaps = 4/126 (3%)
 Frame = +2

Query: 197 VEASTSLIHHNPWLVLLEYYRRGRKTEIRCGATLISSKHVITAAHC-VKKAKFTSLVARL 373
           +  S S  H  PW V L      R    RCG +LI    V+TAAHC  K  + TS   R+
Sbjct: 59  IGGSESSPHSWPWTVQL----LSRLGHHRCGGSLIDPNFVLTAAHCFAKDRRPTSYSVRV 114

Query: 374 GEYDTSKETDCVQDVCADPVVLIKVAEIIPHPDY---IDSENDIAVLKLEHDAPYTDFIR 544
           G + +   +              +V  +  HP Y     S  D A++++      +   R
Sbjct: 115 GGHRSGSGSP------------HRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTAR 162

Query: 545 PICLPS 562
           PICLPS
Sbjct: 163 PICLPS 168


>AF003134-1|AAB54144.1|  522|Caenorhabditis elegans Trypsin-like
           protease protein 7 protein.
          Length = 522

 Score = 35.1 bits (77), Expect = 0.038
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +2

Query: 230 PWLVLLEYYRRGRKTEIRCGATLISSKHVITAAHC 334
           PW V    Y +  ++   C  T++S +H++ A HC
Sbjct: 175 PWSVFTYLYSKDEQSATTCTGTIVSPRHILIATHC 209


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 34.7 bits (76), Expect = 0.050
 Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
 Frame = +2

Query: 233 WLV-LLEYYRRGRKTEIRCGATLISSKHVITAAHCVKKAKFTSLVARLGEYDTSKETDCV 409
           W+  L+ Y   G+   I CGAT+I    ++TAAHC  + +  S V  + E   ++E    
Sbjct: 50  WMAKLVSYGDNGQG--ILCGATVIDDFWLVTAAHCALQLQTRSFV-YVREPKNNRERS-- 104

Query: 410 QDVCADPVVLIKVAEIIPHPDYID--SENDIAVLKLEHDAPYTDFIRPICL 556
                       V E   H  Y +  ++NDIA+L++  D      I+P+CL
Sbjct: 105 ----------FSVKEAYIHSGYNNQTADNDIALLRISSDLSKLG-IKPVCL 144


>Z81575-6|CAB04633.1|  344|Caenorhabditis elegans Hypothetical
           protein R08H2.7 protein.
          Length = 344

 Score = 33.9 bits (74), Expect = 0.088
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
 Frame = -3

Query: 526 WSIVLQLQNSDIVFAVNVIWMWYDFSHFYKNNRISAHILHTISLLG-----CIIFAKSSY 362
           W  +LQ+    +VF   + ++WY  +  Y N  I+ HI  T+S  G     C++  + S+
Sbjct: 250 WGTLLQVLIPMLVFMGPISYIWYSANTGYYNQAINNHISFTVSFHGILGISCMVLVQKSF 309

Query: 361 Q 359
           +
Sbjct: 310 R 310


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 32.7 bits (71), Expect = 0.20
 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
 Frame = +2

Query: 284 CGATLISSKHVITAAHCVKKAKFTSLVAR--LGEYDTSKETDCVQDVCADPVVLIKVAEI 457
           CG  LI+   VIT+AHCV      ++ A+  LG+   +K  D  Q+  +  + + K    
Sbjct: 46  CGGVLIAPSIVITSAHCVFSGDDFAVTAKVTLGDVHLNKHDDGEQEFRSHAMAISKKF-- 103

Query: 458 IPHPDYIDSENDIAVLKLEHDA 523
               D  ++ +D+AV+ L   A
Sbjct: 104 --FNDASEANDDVAVIFLPQRA 123


>U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like
           protease protein 6 protein.
          Length = 360

 Score = 31.1 bits (67), Expect = 0.62
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
 Frame = +2

Query: 218 IHHNPWLVLLEYYRRGRKTEI----RCGATLISSKHVITAAHC 334
           I   PW V +  Y   +  +      C  TL S +H++TA HC
Sbjct: 49  IDEAPWAVRINTYTNVKNIDETWSKHCSGTLTSPRHILTATHC 91


>U39848-2|AAT81211.1|  279|Caenorhabditis elegans Hypothetical
           protein B0286.6 protein.
          Length = 279

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +2

Query: 479 DSENDIAVLKLEHDAPYTDFIRPICLPS 562
           +S NDIAV +LE    ++  I P CLPS
Sbjct: 118 ESFNDIAVFELEEPIEFSKDIFPACLPS 145


>Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical
           protein F31D4.6 protein.
          Length = 292

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 19/49 (38%), Positives = 27/49 (55%)
 Frame = +2

Query: 185 DSCGVEASTSLIHHNPWLVLLEYYRRGRKTEIRCGATLISSKHVITAAH 331
           +SCG++   S I + PW V   +   G     R G ++IS  H+ITAAH
Sbjct: 15  ESCGIQQE-SKIKNFPWAV--SFTVDGVN---RLGGSIISPYHIITAAH 57


>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical
           protein F29G6.3c protein.
          Length = 1453

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 13/47 (27%), Positives = 20/47 (42%)
 Frame = +2

Query: 407 VQDVCADPVVLIKVAEIIPHPDYIDSENDIAVLKLEHDAPYTDFIRP 547
           +Q    D +   K+   I     +DS N + VL   H+  + DF  P
Sbjct: 233 IQSDSEDSIAPSKLTHSIAVGGVVDSHNGVNVLHRSHEVEFVDFAAP 279


>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical
           protein F29G6.3b protein.
          Length = 1785

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 13/47 (27%), Positives = 20/47 (42%)
 Frame = +2

Query: 407 VQDVCADPVVLIKVAEIIPHPDYIDSENDIAVLKLEHDAPYTDFIRP 547
           +Q    D +   K+   I     +DS N + VL   H+  + DF  P
Sbjct: 233 IQSDSEDSIAPSKLTHSIAVGGVVDSHNGVNVLHRSHEVEFVDFAAP 279


>Z78543-3|CAB01755.2|  772|Caenorhabditis elegans Hypothetical
           protein F29G6.3a protein.
          Length = 772

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 13/47 (27%), Positives = 20/47 (42%)
 Frame = +2

Query: 407 VQDVCADPVVLIKVAEIIPHPDYIDSENDIAVLKLEHDAPYTDFIRP 547
           +Q    D +   K+   I     +DS N + VL   H+  + DF  P
Sbjct: 233 IQSDSEDSIAPSKLTHSIAVGGVVDSHNGVNVLHRSHEVEFVDFAAP 279


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,367,364
Number of Sequences: 27780
Number of extensions: 272383
Number of successful extensions: 731
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)