Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_O07
(264 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical pr... 28 1.0
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr... 28 1.0
Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical pr... 28 1.0
Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical p... 28 1.0
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p... 28 1.0
Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical pr... 28 1.0
Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical pr... 28 1.0
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr... 28 1.0
Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical pr... 28 1.0
M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein. 28 1.0
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 26 4.2
Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical pr... 25 5.6
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 25 5.6
AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis p... 25 5.6
>Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 27.9 bits (59), Expect = 1.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 114 FTLDIALVKRHHQYTPSYEGSMYRHILHPSK 22
+T D+++ HHQ P+ Y LHP +
Sbjct: 194 YTSDVSVPVNHHQLHPNSSAHQYESHLHPHR 224
>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 27.9 bits (59), Expect = 1.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 114 FTLDIALVKRHHQYTPSYEGSMYRHILHPSK 22
+T D+++ HHQ P+ Y LHP +
Sbjct: 194 YTSDVSVPVNHHQLHPNSSAHQYESHLHPHR 224
>Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical
protein ZK524.2a protein.
Length = 1813
Score = 27.9 bits (59), Expect = 1.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 114 FTLDIALVKRHHQYTPSYEGSMYRHILHPSK 22
+T D+++ HHQ P+ Y LHP +
Sbjct: 194 YTSDVSVPVNHHQLHPNSSAHQYESHLHPHR 224
>Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 27.9 bits (59), Expect = 1.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 114 FTLDIALVKRHHQYTPSYEGSMYRHILHPSK 22
+T D+++ HHQ P+ Y LHP +
Sbjct: 194 YTSDVSVPVNHHQLHPNSSAHQYESHLHPHR 224
>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 27.9 bits (59), Expect = 1.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 114 FTLDIALVKRHHQYTPSYEGSMYRHILHPSK 22
+T D+++ HHQ P+ Y LHP +
Sbjct: 194 YTSDVSVPVNHHQLHPNSSAHQYESHLHPHR 224
>Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical
protein ZK524.2a protein.
Length = 1813
Score = 27.9 bits (59), Expect = 1.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 114 FTLDIALVKRHHQYTPSYEGSMYRHILHPSK 22
+T D+++ HHQ P+ Y LHP +
Sbjct: 194 YTSDVSVPVNHHQLHPNSSAHQYESHLHPHR 224
>Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 27.9 bits (59), Expect = 1.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 114 FTLDIALVKRHHQYTPSYEGSMYRHILHPSK 22
+T D+++ HHQ P+ Y LHP +
Sbjct: 194 YTSDVSVPVNHHQLHPNSSAHQYESHLHPHR 224
>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 27.9 bits (59), Expect = 1.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 114 FTLDIALVKRHHQYTPSYEGSMYRHILHPSK 22
+T D+++ HHQ P+ Y LHP +
Sbjct: 194 YTSDVSVPVNHHQLHPNSSAHQYESHLHPHR 224
>Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical
protein ZK524.2a protein.
Length = 1813
Score = 27.9 bits (59), Expect = 1.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 114 FTLDIALVKRHHQYTPSYEGSMYRHILHPSK 22
+T D+++ HHQ P+ Y LHP +
Sbjct: 194 YTSDVSVPVNHHQLHPNSSAHQYESHLHPHR 224
>M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.
Length = 1815
Score = 27.9 bits (59), Expect = 1.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 114 FTLDIALVKRHHQYTPSYEGSMYRHILHPSK 22
+T D+++ HHQ P+ Y LHP +
Sbjct: 194 YTSDVSVPVNHHQLHPNSSAHQYESHLHPHR 224
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/20 (45%), Positives = 17/20 (85%)
Frame = +2
Query: 89 FTNAMSNVNQRSMDALRHDP 148
FT+A+++V+++S+ A RH P
Sbjct: 725 FTSALASVSKKSVKAARHGP 744
>Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical
protein F18C12.2b protein.
Length = 2271
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 22 LTWM*NMTIHGSFIARCILVVPLHQRYVQRESTLYGRAST*STGKLITSI 171
L+W H + A C L+ P+H +Y R L + S S+ K + ++
Sbjct: 469 LSWKSESIDHSTVEALCALMYPMHDQYELRIEQL-NKQSLMSSPKFVENL 517
>Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical
protein F18C12.2a protein.
Length = 2279
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 22 LTWM*NMTIHGSFIARCILVVPLHQRYVQRESTLYGRAST*STGKLITSI 171
L+W H + A C L+ P+H +Y R L + S S+ K + ++
Sbjct: 469 LSWKSESIDHSTVEALCALMYPMHDQYELRIEQL-NKQSLMSSPKFVENL 517
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 231 RPSC*PSCHLLVMWVKPMGIYRRNQF 154
RP C PSCH+ + + P + R N F
Sbjct: 312 RPDCMPSCHVDCLIIPPQQV-RCNSF 336
>AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis
protein RME-8 protein.
Length = 2279
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 22 LTWM*NMTIHGSFIARCILVVPLHQRYVQRESTLYGRAST*STGKLITSI 171
L+W H + A C L+ P+H +Y R L + S S+ K + ++
Sbjct: 469 LSWKSESIDHSTVEALCALMYPMHDQYELRIEQL-NKQSLMSSPKFVENL 517
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,260,312
Number of Sequences: 27780
Number of extensions: 109080
Number of successful extensions: 148
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 148
length of database: 12,740,198
effective HSP length: 66
effective length of database: 10,906,718
effective search space used: 229041078
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -