Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_O05
         (358 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81135-3|CAB03456.1|  251|Caenorhabditis elegans Hypothetical pr...    27   2.9  
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ...    27   3.9  
AC199170-9|ABO33267.1|  388|Caenorhabditis elegans Hypothetical ...    27   3.9  
U64598-13|AAL65779.1|  388|Caenorhabditis elegans Paf-acetylhydr...    27   5.1  
AF386745-1|AAL57290.1|  388|Caenorhabditis elegans PAF-2 protein.      27   5.1  
AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.       27   5.1  
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical...    27   5.1  
AF003135-5|AAK18990.1|  678|Caenorhabditis elegans Hypothetical ...    27   5.1  
AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical ...    27   5.1  
AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical ...    27   5.1  
AF386744-1|AAL57289.1|  384|Caenorhabditis elegans PAF-1 protein.      26   6.7  
AF039716-8|AAB96738.1|  384|Caenorhabditis elegans Paf-acetylhyd...    26   6.7  
AC006675-3|AAK84550.1|  335|Caenorhabditis elegans Serpentine re...    26   6.7  
Z81098-9|CAB03185.3|  364|Caenorhabditis elegans Hypothetical pr...    26   8.9  
Z81079-9|CAB03085.3|  364|Caenorhabditis elegans Hypothetical pr...    26   8.9  
U40952-1|AAK68681.3|  436|Caenorhabditis elegans Hypothetical pr...    26   8.9  
AF040645-1|AAB94973.1|  377|Caenorhabditis elegans Hypothetical ...    26   8.9  

>Z81135-3|CAB03456.1|  251|Caenorhabditis elegans Hypothetical
           protein W01G7.4 protein.
          Length = 251

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 22  EADTEKPVFPDLDEELEIENWENYQPEEVRY 114
           E D++ P   D D+  + +NW N  P+E  Y
Sbjct: 163 EDDSDGPPADDEDDSNDEDNWRNDYPDEESY 193


>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
           protein C08G9.2 protein.
          Length = 2224

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
 Frame = -1

Query: 97  VDNSPNSQFPIP---RPSPGRRVSQCP 26
           + N  NS FP P   RP P  +V QCP
Sbjct: 178 IRNLANSLFPTPSPIRPLPTTKVGQCP 204


>AC199170-9|ABO33267.1|  388|Caenorhabditis elegans Hypothetical
           protein T08D2.8 protein.
          Length = 388

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = +1

Query: 7   EQYYGEADTEKPVFPDLDEELEIENWENYQPEEVRYAFH 123
           E Y+ +  TEK   P L EELE E   +  PE +R A H
Sbjct: 174 EVYHDKLKTEK--LPPLIEELEKEFESSASPEMLRLAKH 210


>U64598-13|AAL65779.1|  388|Caenorhabditis elegans
           Paf-acetylhydrolase protein 2,isoform a protein.
          Length = 388

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 11/40 (27%), Positives = 24/40 (60%)
 Frame = -1

Query: 127 LNERRIELLLVDNSPNSQFPIPRPSPGRRVSQCPLHHNIV 8
           L E+ I++ L++ +  ++F I     G+RV++C    N++
Sbjct: 161 LVEQPIKIKLIEKNEKNEFKIRNQQVGKRVTECVKALNVL 200


>AF386745-1|AAL57290.1|  388|Caenorhabditis elegans PAF-2 protein.
          Length = 388

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 11/40 (27%), Positives = 24/40 (60%)
 Frame = -1

Query: 127 LNERRIELLLVDNSPNSQFPIPRPSPGRRVSQCPLHHNIV 8
           L E+ I++ L++ +  ++F I     G+RV++C    N++
Sbjct: 161 LVEQPIKIKLIEKNEKNEFKIRNQQVGKRVTECVKALNVL 200


>AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.
          Length = 1666

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -1

Query: 157  RETSAGFPRGLNERRIELLLVDNSPNSQFPIPRP 56
            RE++    R LN+  +   L  ++PN ++ IP P
Sbjct: 1271 RESTQDIHRALNDLELNSPLARSTPNEEYRIPPP 1304


>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
           protein F15E6.1 protein.
          Length = 1655

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 10/42 (23%), Positives = 21/42 (50%)
 Frame = -1

Query: 178 KLEIFGKRETSAGFPRGLNERRIELLLVDNSPNSQFPIPRPS 53
           +L+   ++  +  FP    +R  E++++   P +    PRPS
Sbjct: 451 ELQQMNRQRAAPQFPAAAAQRSAEVIVIQQRPGASSRAPRPS 492


>AF003135-5|AAK18990.1|  678|Caenorhabditis elegans Hypothetical
           protein W03F11.6b protein.
          Length = 678

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -1

Query: 157 RETSAGFPRGLNERRIELLLVDNSPNSQFPIPRP 56
           RE++    R LN+  +   L  ++PN ++ IP P
Sbjct: 289 RESTQDIHRALNDLELNSPLARSTPNEEYRIPPP 322


>AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical
            protein W03F11.6c protein.
          Length = 1419

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -1

Query: 157  RETSAGFPRGLNERRIELLLVDNSPNSQFPIPRP 56
            RE++    R LN+  +   L  ++PN ++ IP P
Sbjct: 1269 RESTQDIHRALNDLELNSPLARSTPNEEYRIPPP 1302


>AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical
            protein W03F11.6a protein.
          Length = 1658

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -1

Query: 157  RETSAGFPRGLNERRIELLLVDNSPNSQFPIPRP 56
            RE++    R LN+  +   L  ++PN ++ IP P
Sbjct: 1269 RESTQDIHRALNDLELNSPLARSTPNEEYRIPPP 1302


>AF386744-1|AAL57289.1|  384|Caenorhabditis elegans PAF-1 protein.
          Length = 384

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -1

Query: 127 LNERRIELLLVDNSPNSQFPIPRPSPGRRVSQC 29
           L E+ +++ LVD +   QF I     G+R  +C
Sbjct: 159 LVEKPMKIKLVDRNDKDQFKIRNEQVGKRAEEC 191


>AF039716-8|AAB96738.1|  384|Caenorhabditis elegans
           Paf-acetylhydrolase protein 1 protein.
          Length = 384

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -1

Query: 127 LNERRIELLLVDNSPNSQFPIPRPSPGRRVSQC 29
           L E+ +++ LVD +   QF I     G+R  +C
Sbjct: 159 LVEKPMKIKLVDRNDKDQFKIRNEQVGKRAEEC 191


>AC006675-3|AAK84550.1|  335|Caenorhabditis elegans Serpentine
           receptor, class h protein35 protein.
          Length = 335

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
 Frame = -2

Query: 105 FFWL---IILPILNFQFLVQVREDGFLS 31
           F WL    ++ I+NFQ  V +R DGFL+
Sbjct: 61  FEWLNNAFLIDIMNFQPTVLIRVDGFLN 88


>Z81098-9|CAB03185.3|  364|Caenorhabditis elegans Hypothetical
           protein K07A12.5 protein.
          Length = 364

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +1

Query: 58  DEELEIENWENYQPEEVRYAFH 123
           D + +++NWE ++ E+V   FH
Sbjct: 18  DAQKQLKNWEEFRKEQVVEIFH 39


>Z81079-9|CAB03085.3|  364|Caenorhabditis elegans Hypothetical
           protein K07A12.5 protein.
          Length = 364

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +1

Query: 58  DEELEIENWENYQPEEVRYAFH 123
           D + +++NWE ++ E+V   FH
Sbjct: 18  DAQKQLKNWEEFRKEQVVEIFH 39


>U40952-1|AAK68681.3|  436|Caenorhabditis elegans Hypothetical
           protein C03B1.13 protein.
          Length = 436

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -2

Query: 150 LVLGSHEDLMKGVSNFFWLIILPILNFQFLVQV 52
           LVLGS E L  G S FF + I  ++   FL+ V
Sbjct: 108 LVLGSEEILPLGSSRFFIMQISAVIPILFLLFV 140


>AF040645-1|AAB94973.1|  377|Caenorhabditis elegans Hypothetical
           protein F52C6.5 protein.
          Length = 377

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 13  YYGEADTEKPVFPDLDEELEIENW 84
           +YGE   EKPV    D+ +  ENW
Sbjct: 299 FYGEKVFEKPVGSGWDKLIRWENW 322


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,978,998
Number of Sequences: 27780
Number of extensions: 106847
Number of successful extensions: 388
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 388
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)