Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_O01
(638 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098501-8|AAC67403.1| 459|Caenorhabditis elegans Hypothetical ... 117 6e-27
U39743-1|AAA80436.2| 314|Caenorhabditis elegans Hypothetical pr... 44 9e-05
U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical pr... 44 9e-05
AF067947-2|AAC19229.2| 273|Caenorhabditis elegans Hypothetical ... 44 9e-05
AF067947-1|AAC19233.1| 273|Caenorhabditis elegans Hypothetical ... 44 9e-05
X01005-1|CAA25498.1| 273|Caenorhabditis elegans protein ( Caeno... 44 1e-04
AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical ... 44 1e-04
AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical ... 44 1e-04
U23174-5|AAC46711.1| 329|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AF106576-3|AAK68401.1| 329|Caenorhabditis elegans Hypothetical ... 43 2e-04
AC006671-2|AAO21381.1| 459|Caenorhabditis elegans Nuclear hormo... 43 2e-04
U49941-9|AAB53871.1| 141|Caenorhabditis elegans Hypothetical pr... 34 0.099
U21319-5|AAL02454.1| 1100|Caenorhabditis elegans Hypothetical pr... 31 0.70
U21319-4|AAL02455.1| 1097|Caenorhabditis elegans Hypothetical pr... 31 0.70
U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical pr... 29 2.8
>AF098501-8|AAC67403.1| 459|Caenorhabditis elegans Hypothetical
protein H28G03.4 protein.
Length = 459
Score = 117 bits (282), Expect = 6e-27
Identities = 64/155 (41%), Positives = 84/155 (54%)
Frame = -1
Query: 635 IFTIEGHYNKQNDKVYAHSSKEAAQVVGKVQRGHRPASVMVWWGVSYQRVTKLHFCEKGE 456
IF IE +N QND+VYA + + +VQR P +MV+ G++ T L F +G
Sbjct: 223 IFCIEQSFNTQNDRVYAKTQPNS-----RVQRTGYPKGIMVFAGITANGKTPLIFVPQGI 277
Query: 455 KTSAKKYQYTVLDHVAKPLSNTFF*NIPWTFQQDSAPGHKARITQTWLETNVTYFIRAED 276
K + Y +L P F WTFQQD AP HK + Q W E+N FI
Sbjct: 278 KVNGNNY-LDMLKTELMPWVKKHFKKTKWTFQQDGAPAHKHKNVQAWCESNFPDFIAFNQ 336
Query: 275 WPSSSTDLNPLDFILWSVLENMACSKRYGDIES*K 171
WP SS DLNP+D+ +WSVLE ACSK + +I+S K
Sbjct: 337 WPPSSPDLNPMDYSVWSVLEAKACSKPHRNIDSLK 371
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -2
Query: 223 F*RTWPALNDMATLSLKKSLEQAV-AKFPLETVRKSIDSCPNRLKACIKAKGGHFE 59
F R A ++ T+ L + V + + +R ++D+ P R++ CI+A G FE
Sbjct: 393 FPRRLEASRELLTIILTHPVWSKVWNELEIPYLRATVDAFPKRVRVCIEADGDIFE 448
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -2
Query: 181 SLKKSLEQAVAKFPLETVRKSIDSCPNRLKA 89
SLK SL++A + + +R ++DS P RL+A
Sbjct: 369 SLKDSLKKAWDELDINYLRATVDSFPRRLEA 399
>U39743-1|AAA80436.2| 314|Caenorhabditis elegans Hypothetical
protein R173.2 protein.
Length = 314
Score = 44.0 bits (99), Expect = 9e-05
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Frame = -1
Query: 536 HRPASVMVWWGVSYQRVTKLHFCEKGEKTSAKKYQY-TVLDHVAKP--LSNTFF*NIPWT 366
H SVMVW + + L + + ++QY +L+ +P L N +
Sbjct: 162 HGGGSVMVWGCFTSTSMGPLRRIQ----SIMDRFQYENILETTMRPWALQNV---GRGFV 214
Query: 365 FQQDSAPGHKARITQTWLETNVTYFIRAEDWPSSSTDLNPLDFILWSVLE 216
FQQD+ P H + ++W + + + DWPS S DLNP++ LW LE
Sbjct: 215 FQQDNDPKHTSLHVRSWFQRRRVHLL---DWPSQSPDLNPIEH-LWEELE 260
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 166 LEQAVAKFPLETVRKSIDSCPNRLKACIKAKG 71
LE A P+ + K IDS P R +A I A G
Sbjct: 278 LENAWKAIPMSVIHKLIDSMPRRCQAFIDANG 309
>U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical
protein F18C5.7 protein.
Length = 343
Score = 44.0 bits (99), Expect = 9e-05
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Frame = -1
Query: 536 HRPASVMVWWGVSYQRVTKLHFCEKGEKTSAKKYQY-TVLDHVAKP--LSNTFF*NIPWT 366
H SVMVW + + L + + ++QY +L+ +P L N +
Sbjct: 191 HGGGSVMVWGCFTSTSMGPLRRIQ----SIMDRFQYENILETTMRPWALQNV---GRGFV 243
Query: 365 FQQDSAPGHKARITQTWLETNVTYFIRAEDWPSSSTDLNPLDFILWSVLE 216
FQQD+ P H + ++W + + + DWPS S DLNP++ LW LE
Sbjct: 244 FQQDNDPKHTSLHVRSWFQRRRVHLL---DWPSQSPDLNPIEH-LWEELE 289
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 166 LEQAVAKFPLETVRKSIDSCPNRLKACIKAKG 71
LE A P+ + K IDS P R +A I A G
Sbjct: 307 LENAWKAIPMSVIHKLIDSMPRRCQAVIDANG 338
>AF067947-2|AAC19229.2| 273|Caenorhabditis elegans Hypothetical
protein T10B5.9 protein.
Length = 273
Score = 44.0 bits (99), Expect = 9e-05
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Frame = -1
Query: 536 HRPASVMVWWGVSYQRVTKLHFCEKGEKTSAKKYQY-TVLDHVAKP--LSNTFF*NIPWT 366
H SVMVW + + L + + ++QY +L+ +P L N +
Sbjct: 121 HGGGSVMVWGCFTSTSMGPLRRIQ----SIMDRFQYENILETTMRPWALQNV---GRGFV 173
Query: 365 FQQDSAPGHKARITQTWLETNVTYFIRAEDWPSSSTDLNPLDFILWSVLE 216
FQQD+ P H + ++W + + + DWPS S DLNP++ LW LE
Sbjct: 174 FQQDNDPKHTSLHVRSWFQRRRVHLL---DWPSQSPDLNPIEH-LWEELE 219
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 166 LEQAVAKFPLETVRKSIDSCPNRLKACIKAKG 71
LE A P+ + K IDS P R +A I A G
Sbjct: 237 LENAWKAIPMSVIHKLIDSMPRRCQAVIDANG 268
>AF067947-1|AAC19233.1| 273|Caenorhabditis elegans Hypothetical
protein T10B5.1 protein.
Length = 273
Score = 44.0 bits (99), Expect = 9e-05
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Frame = -1
Query: 536 HRPASVMVWWGVSYQRVTKLHFCEKGEKTSAKKYQY-TVLDHVAKP--LSNTFF*NIPWT 366
H SVMVW + + L + + ++QY +L+ +P L N +
Sbjct: 121 HGGGSVMVWGCFTSTSMGPLRRIQ----SIMDRFQYENILETTMRPWALQNV---GRGFV 173
Query: 365 FQQDSAPGHKARITQTWLETNVTYFIRAEDWPSSSTDLNPLDFILWSVLE 216
FQQD+ P H + ++W + + + DWPS S DLNP++ LW LE
Sbjct: 174 FQQDNDPKHTSLHVRSWFQRRRVHLL---DWPSQSPDLNPIEH-LWEELE 219
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 166 LEQAVAKFPLETVRKSIDSCPNRLKACIKAKG 71
LE A P+ + K IDS P R +A I A G
Sbjct: 237 LENAWKAIPMSVIHKLIDSMPRRCQAVIDANG 268
>X01005-1|CAA25498.1| 273|Caenorhabditis elegans protein (
Caenorhabditis eleganstransposable element Tc1. ).
Length = 273
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = -1
Query: 371 WTFQQDSAPGHKARITQTWLETNVTYFIRAEDWPSSSTDLNPLDFILWSVLE 216
+ FQQD+ P H + ++W + + + DWPS S DLNP++ LW LE
Sbjct: 172 FVFQQDNDPKHTSLHVRSWFQRRHVHLL---DWPSQSPDLNPIEH-LWEELE 219
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 166 LEQAVAKFPLETVRKSIDSCPNRLKACIKAKG 71
LE A P+ + K IDS P R +A I A G
Sbjct: 237 LENAWKAIPMSVIHKLIDSMPRRCQAVIDANG 268
>AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical
protein Y39F10A.4 protein.
Length = 343
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = -1
Query: 371 WTFQQDSAPGHKARITQTWLETNVTYFIRAEDWPSSSTDLNPLDFILWSVLE 216
+ FQQD+ P H + ++W + + + DWPS S DLNP++ LW LE
Sbjct: 242 FVFQQDNDPKHTSLHVRSWFQRRHVHLL---DWPSQSPDLNPIEH-LWEKLE 289
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 166 LEQAVAKFPLETVRKSIDSCPNRLKACIKAKG 71
LE A P+ + K IDS P R +A I A G
Sbjct: 307 LENAWKAIPMSVIHKLIDSMPRRCQAVIDANG 338
>AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical
protein T07D3.8 protein.
Length = 343
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = -1
Query: 371 WTFQQDSAPGHKARITQTWLETNVTYFIRAEDWPSSSTDLNPLDFILWSVLE 216
+ FQQD+ P H + ++W + + + DWPS S DLNP++ LW LE
Sbjct: 242 FVFQQDNDPKHTSLHVRSWFQRRHVHLL---DWPSQSPDLNPIEH-LWEELE 289
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 166 LEQAVAKFPLETVRKSIDSCPNRLKACIKAKG 71
LE A P+ + K IDS P R +A I A G
Sbjct: 307 LENAWKAIPMSVIHKLIDSMPRRCQAVIDANG 338
>U23174-5|AAC46711.1| 329|Caenorhabditis elegans Hypothetical
protein R10H1.3 protein.
Length = 329
Score = 43.2 bits (97), Expect = 2e-04
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Frame = -1
Query: 545 QRGHRPASVMVWWGVSYQRVTKLHFCEKGEKTSAKKYQYTVLDHVAKPLSNTFF*NIPWT 366
+R +VMVW + ++ ++ F K ++ YQ + ++K L + + +
Sbjct: 172 RRNFGGGTVMVWGAFTEKKKLEIQFVSS--KMNSTDYQNVLELELSKYLRH--YSRKDFR 227
Query: 365 FQQDSAPGHKARITQTWLETNVTYFIRAEDWPSSSTDLNPLDFILWSVLENM--ACSKRY 192
FQQD+A H + T+ + + I DWP+ S DLNP++ LW +L + A +K Y
Sbjct: 228 FQQDNATIHVSNSTRDYFKLKK---INLLDWPARSPDLNPIE-NLWGILVRIVYAQNKTY 283
Query: 191 GDIES*K 171
+ S K
Sbjct: 284 PTVASLK 290
>AF106576-3|AAK68401.1| 329|Caenorhabditis elegans Hypothetical
protein W07E6.6 protein.
Length = 329
Score = 43.2 bits (97), Expect = 2e-04
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Frame = -1
Query: 545 QRGHRPASVMVWWGVSYQRVTKLHFCEKGEKTSAKKYQYTVLDHVAKPLSNTFF*NIPWT 366
+R +VMVW + ++ ++ F K ++ YQ + ++K L + + +
Sbjct: 172 RRNFGGGTVMVWGAFTEKKKLEIQFVSS--KMNSTDYQNVLELELSKYLRH--YSRKDFR 227
Query: 365 FQQDSAPGHKARITQTWLETNVTYFIRAEDWPSSSTDLNPLDFILWSVLENM--ACSKRY 192
FQQD+A H + T+ + + I DWP+ S DLNP++ LW +L + A +K Y
Sbjct: 228 FQQDNATIHVSNSTRDYFKLKK---INLLDWPARSPDLNPIE-NLWGILVRIVYAQNKTY 283
Query: 191 GDIES*K 171
+ S K
Sbjct: 284 PTVASLK 290
>AC006671-2|AAO21381.1| 459|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 88, isoform b protein.
Length = 459
Score = 43.2 bits (97), Expect = 2e-04
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Frame = -1
Query: 545 QRGHRPASVMVWWGVSYQRVTKLHFCEKGEKTSAKKYQYTVLDHVAKPLSNTFF*NIPWT 366
+R +VMVW + ++ ++ F K ++ YQ + ++K L + + +
Sbjct: 302 RRNFGGGTVMVWGAFTEKKKLEIQFVSS--KMNSTDYQNVLELELSKYLRH--YSRKDFR 357
Query: 365 FQQDSAPGHKARITQTWLETNVTYFIRAEDWPSSSTDLNPLDFILWSVLENM--ACSKRY 192
FQQD+A H + T+ + + I DWP+ S DLNP++ LW +L + A +K Y
Sbjct: 358 FQQDNATIHVSNSTRDYFKLKK---INLLDWPARSPDLNPIE-NLWGILVRIVYAQNKTY 413
Query: 191 GDIES*K 171
+ S K
Sbjct: 414 PTVASLK 420
>U49941-9|AAB53871.1| 141|Caenorhabditis elegans Hypothetical
protein K10B3.2 protein.
Length = 141
Score = 33.9 bits (74), Expect = 0.099
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = -1
Query: 365 FQQDSAPGHKARITQTWLETNVTYFIRAEDWPSSSTDLNPLDFILWSVLENM--ACSKRY 192
F QD+A H + T+ + + I DWP+ S DLNP++ LW +L + A +K Y
Sbjct: 40 FCQDNATIHVSNSTRDYFKLKK---INLLDWPARSPDLNPIE-NLWGILVRIVYAQNKTY 95
Query: 191 GDIES*K 171
+ S K
Sbjct: 96 PTVASLK 102
>U21319-5|AAL02454.1| 1100|Caenorhabditis elegans Hypothetical
protein C30G12.6a protein.
Length = 1100
Score = 31.1 bits (67), Expect = 0.70
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = -1
Query: 263 STDLNPLDFILWSVLENMACSKRYGDIES*KIFGASGGEISLGNSA*IYRFVPKQI 96
STD D +L+++L M + +YGD+ K+ + LGNS+ ++ KQ+
Sbjct: 573 STDYTCKDLVLYNLLHLMNVATKYGDLHDDKMLYKHALKKILGNSSFVFSNDVKQL 628
>U21319-4|AAL02455.1| 1097|Caenorhabditis elegans Hypothetical
protein C30G12.6b protein.
Length = 1097
Score = 31.1 bits (67), Expect = 0.70
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = -1
Query: 263 STDLNPLDFILWSVLENMACSKRYGDIES*KIFGASGGEISLGNSA*IYRFVPKQI 96
STD D +L+++L M + +YGD+ K+ + LGNS+ ++ KQ+
Sbjct: 573 STDYTCKDLVLYNLLHLMNVATKYGDLHDDKMLYKHALKKILGNSSFVFSNDVKQL 628
>U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical
protein C10H11.1 protein.
Length = 918
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/70 (24%), Positives = 34/70 (48%)
Frame = -1
Query: 638 NIFTIEGHYNKQNDKVYAHSSKEAAQVVGKVQRGHRPASVMVWWGVSYQRVTKLHFCEKG 459
++ EG Y+ +K A S+ +++GK S++ G S ++KL FC +
Sbjct: 255 HLMKYEGLYSNILEKTKA--SQLCIEILGKSDLNCTAESIVTVTGASRSTLSKLLFCSEN 312
Query: 458 EKTSAKKYQY 429
++S++ Y
Sbjct: 313 SESSSENNNY 322
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,784,762
Number of Sequences: 27780
Number of extensions: 302500
Number of successful extensions: 745
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -