Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_O01
         (638 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   3.3  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          22   4.4  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = -2

Query: 502 SLIKELQNYIFV--KKERKLQLKSINIQSWIMLRNLSAIHFFKI 377
           ++++ELQN++F+  K  R L +    I+S I  R  + ++  +I
Sbjct: 804 NVLRELQNHVFIGRKNMRVLYVNGSGIES-IQNRTFNGLNNLQI 846


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = -1

Query: 614 YNKQNDKVYAHSSKEAAQVVGKVQRGHRPASVMVWW 507
           YN    K      +E+AQ   K     +   ++VWW
Sbjct: 38  YNNIKRKRSWSRPRESAQTTSKAGIHRKKVLLLVWW 73


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,925
Number of Sequences: 438
Number of extensions: 3841
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)