Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_N24
         (595 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81460-5|CAB03832.1|  952|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z70209-3|CAA94147.1|  952|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z37139-5|CAA85490.1|  558|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AF100307-8|AAC68937.2|  250|Caenorhabditis elegans Hypothetical ...    28   5.8  
U61954-12|AAK29807.1|  274|Caenorhabditis elegans Fatty acid elo...    27   7.6  
U41559-1|AAC24260.1|  373|Caenorhabditis elegans Hypothetical pr...    27   7.6  

>Z81460-5|CAB03832.1|  952|Caenorhabditis elegans Hypothetical
           protein C04A11.4 protein.
          Length = 952

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 158 CTETEMDCPADTHINTKGLCPRQQDRGVECCHSG 259
           C     DCPAD  +    LCP +++   E C+ G
Sbjct: 451 CNGETNDCPADFFVQNAALCPGKEN---EFCYEG 481


>Z70209-3|CAA94147.1|  952|Caenorhabditis elegans Hypothetical
           protein C04A11.4 protein.
          Length = 952

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 158 CTETEMDCPADTHINTKGLCPRQQDRGVECCHSG 259
           C     DCPAD  +    LCP +++   E C+ G
Sbjct: 451 CNGETNDCPADFFVQNAALCPGKEN---EFCYEG 481


>Z37139-5|CAA85490.1|  558|Caenorhabditis elegans Hypothetical
           protein C14B1.9 protein.
          Length = 558

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 13/60 (21%), Positives = 33/60 (55%)
 Frame = -1

Query: 472 EHHCKLVT*LLSKILKTTSNKIWSRKKLCRTIFLAPD*FRIAMERFANIKYLSLQLSLFS 293
           E  C +   +L   +K T+N++++ +K+C +     + ++  + +F +I   +L  ++FS
Sbjct: 145 ESECAVQADVLDNAVKNTANQLFNMEKICNSTTCIANCYQDNIHKFCDIGEDNLLDTIFS 204


>AF100307-8|AAC68937.2|  250|Caenorhabditis elegans Hypothetical
           protein T12B5.13 protein.
          Length = 250

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
 Frame = +3

Query: 318 RYLIFANRSMAILN*S-GAKNIVRHNFFRLQILLDVVFKILDNNHVTSLQWCSNYKWNIR 494
           R L+F      ILN    A+NI   + ++    L +   +L+N  +  L     ++  + 
Sbjct: 121 RQLMFHFHFETILNSELTARNITSLDLWKCAKKLHLYDSLLENRQIVHLFHLKWFEIQLD 180

Query: 495 SFVLGFSTQYHSGVWNLCPI 554
           SF    +T+     WN C I
Sbjct: 181 SFPTNIATEIRDVRWNCCDI 200


>U61954-12|AAK29807.1|  274|Caenorhabditis elegans Fatty acid
           elongation protein 6 protein.
          Length = 274

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 481 NGI*GVLYWVFLLSIIPEFG 540
           NG+ G+  W+F+LS + EFG
Sbjct: 106 NGLSGMFTWLFVLSKVAEFG 125


>U41559-1|AAC24260.1|  373|Caenorhabditis elegans Hypothetical
           protein C26B2.8 protein.
          Length = 373

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +1

Query: 496 VLYWVFLLSIIPEFGICARYGDRL 567
           +L  VF++ ++P  G+CARY   L
Sbjct: 56  MLNTVFIMLLLPAAGLCARYNSHL 79


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,659,314
Number of Sequences: 27780
Number of extensions: 325657
Number of successful extensions: 707
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)