Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_N23
(529 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA ... 204 1e-52
BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17 p... 204 1e-52
BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17 p... 204 1e-52
BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17 p... 204 1e-52
BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17 p... 204 1e-52
AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17 p... 204 1e-52
BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17 p... 201 1e-51
AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens ... 77 5e-14
BC035829-1|AAH35829.1| 649|Homo sapiens RHBDF2 protein protein. 31 3.3
BC016034-1|AAH16034.2| 856|Homo sapiens rhomboid 5 homolog 2 (D... 31 3.3
AY500247-1|AAS77567.1| 827|Homo sapiens rhomboid veinlet-like 5... 31 3.3
AK074034-1|BAB84860.1| 716|Homo sapiens FLJ00080 protein protein. 31 3.3
AK025994-1|BAB15310.1| 619|Homo sapiens protein ( Homo sapiens ... 31 3.3
>X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA for
putative ribosomal protein. ).
Length = 184
Score = 204 bits (498), Expect = 1e-52
Identities = 90/120 (75%), Positives = 109/120 (90%)
Frame = -2
Query: 528 TAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKKSAEFL 349
TA AI+ + +R+A +YLK+VT +K+C+PFRR+NGGVGRCAQAKQ+G TQGRWPKKSAEFL
Sbjct: 32 TAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFL 91
Query: 348 LQLLRNAESNADYKGLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLS 169
L +L+NAESNA+ KGLDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMSSPCHIE+ L+
Sbjct: 92 LHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILT 151
>BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 204 bits (498), Expect = 1e-52
Identities = 90/120 (75%), Positives = 109/120 (90%)
Frame = -2
Query: 528 TAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKKSAEFL 349
TA AI+ + +R+A +YLK+VT +K+C+PFRR+NGGVGRCAQAKQ+G TQGRWPKKSAEFL
Sbjct: 32 TAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFL 91
Query: 348 LQLLRNAESNADYKGLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLS 169
L +L+NAESNA+ KGLDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMSSPCHIE+ L+
Sbjct: 92 LHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILT 151
>BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 204 bits (498), Expect = 1e-52
Identities = 90/120 (75%), Positives = 109/120 (90%)
Frame = -2
Query: 528 TAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKKSAEFL 349
TA AI+ + +R+A +YLK+VT +K+C+PFRR+NGGVGRCAQAKQ+G TQGRWPKKSAEFL
Sbjct: 32 TAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFL 91
Query: 348 LQLLRNAESNADYKGLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLS 169
L +L+NAESNA+ KGLDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMSSPCHIE+ L+
Sbjct: 92 LHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILT 151
>BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 204 bits (498), Expect = 1e-52
Identities = 90/120 (75%), Positives = 109/120 (90%)
Frame = -2
Query: 528 TAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKKSAEFL 349
TA AI+ + +R+A +YLK+VT +K+C+PFRR+NGGVGRCAQAKQ+G TQGRWPKKSAEFL
Sbjct: 32 TAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFL 91
Query: 348 LQLLRNAESNADYKGLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLS 169
L +L+NAESNA+ KGLDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMSSPCHIE+ L+
Sbjct: 92 LHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILT 151
>BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 204 bits (498), Expect = 1e-52
Identities = 90/120 (75%), Positives = 109/120 (90%)
Frame = -2
Query: 528 TAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKKSAEFL 349
TA AI+ + +R+A +YLK+VT +K+C+PFRR+NGGVGRCAQAKQ+G TQGRWPKKSAEFL
Sbjct: 32 TAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFL 91
Query: 348 LQLLRNAESNADYKGLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLS 169
L +L+NAESNA+ KGLDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMSSPCHIE+ L+
Sbjct: 92 LHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILT 151
>AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 204 bits (498), Expect = 1e-52
Identities = 90/120 (75%), Positives = 109/120 (90%)
Frame = -2
Query: 528 TAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKKSAEFL 349
TA AI+ + +R+A +YLK+VT +K+C+PFRR+NGGVGRCAQAKQ+G TQGRWPKKSAEFL
Sbjct: 32 TAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFL 91
Query: 348 LQLLRNAESNADYKGLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLS 169
L +L+NAESNA+ KGLDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMSSPCHIE+ L+
Sbjct: 92 LHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILT 151
>BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 201 bits (490), Expect = 1e-51
Identities = 89/120 (74%), Positives = 108/120 (90%)
Frame = -2
Query: 528 TAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKKSAEFL 349
TA AI+ + +R+A +YLK+VT +K+C+PFRR+NGGVGRCAQAKQ+G TQGRWPKKSAEFL
Sbjct: 32 TAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFL 91
Query: 348 LQLLRNAESNADYKGLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLS 169
L +L+NAESNA+ KGLDVD LVI+HIQVN+AP +RRRTYRA GRINPYMSSPCHIE+ L+
Sbjct: 92 LHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRARGRINPYMSSPCHIEMILT 151
>AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens
cDNA FLJ27083 fis, clone SPL03425. ).
Length = 136
Score = 76.6 bits (180), Expect = 5e-14
Identities = 35/68 (51%), Positives = 50/68 (73%)
Frame = -2
Query: 372 PKKSAEFLLQLLRNAESNADYKGLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSP 193
PK+ F L+ +SNA++K LD+D L+I+ IQVN+AP + TYRAHG+INPY++S
Sbjct: 21 PKRVLNFCCTCLK-MQSNAEFKVLDIDSLIIEPIQVNKAPKMHCWTYRAHGQINPYVTSA 79
Query: 192 CHIEVCLS 169
CHIE+ L+
Sbjct: 80 CHIEMILT 87
>BC035829-1|AAH35829.1| 649|Homo sapiens RHBDF2 protein protein.
Length = 649
Score = 30.7 bits (66), Expect = 3.3
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -1
Query: 520 GYKKTASSPCCPLPKECDR--KEGMHSLPSF*RWSWPLCTS*TVWYHTGSLAQEICRI 353
G K+T+ + C P+ C+ G H P WP+CT HTG L + C I
Sbjct: 333 GQKRTSGAVCHQDPRTCEEPASSGAHIWPDDIT-KWPICTEQARSNHTGFLHMD-CEI 388
>BC016034-1|AAH16034.2| 856|Homo sapiens rhomboid 5 homolog 2
(Drosophila) protein.
Length = 856
Score = 30.7 bits (66), Expect = 3.3
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -1
Query: 520 GYKKTASSPCCPLPKECDR--KEGMHSLPSF*RWSWPLCTS*TVWYHTGSLAQEICRI 353
G K+T+ + C P+ C+ G H P WP+CT HTG L + C I
Sbjct: 540 GQKRTSGAVCHQDPRTCEEPASSGAHIWPDDIT-KWPICTEQARSNHTGFLHMD-CEI 595
>AY500247-1|AAS77567.1| 827|Homo sapiens rhomboid veinlet-like 5
protein.
Length = 827
Score = 30.7 bits (66), Expect = 3.3
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -1
Query: 520 GYKKTASSPCCPLPKECDR--KEGMHSLPSF*RWSWPLCTS*TVWYHTGSLAQEICRI 353
G K+T+ + C P+ C+ G H P WP+CT HTG L + C I
Sbjct: 511 GQKRTSGAXCHQDPRTCEEPASSGAHIWPDDIT-KWPICTEQARSNHTGFLHMD-CEI 566
>AK074034-1|BAB84860.1| 716|Homo sapiens FLJ00080 protein protein.
Length = 716
Score = 30.7 bits (66), Expect = 3.3
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -1
Query: 520 GYKKTASSPCCPLPKECDR--KEGMHSLPSF*RWSWPLCTS*TVWYHTGSLAQEICRI 353
G K+T+ + C P+ C+ G H P WP+CT HTG L + C I
Sbjct: 486 GQKRTSGAVCHQDPRTCEEPASSGAHIWPDDIT-KWPICTEQARSNHTGFLHMD-CEI 541
>AK025994-1|BAB15310.1| 619|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22341 fis, clone HRC06032. ).
Length = 619
Score = 30.7 bits (66), Expect = 3.3
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -1
Query: 520 GYKKTASSPCCPLPKECDR--KEGMHSLPSF*RWSWPLCTS*TVWYHTGSLAQEICRI 353
G K+T+ + C P+ C+ G H P WP+CT HTG L + C I
Sbjct: 303 GQKRTSGAVCHQDPRTCEEPASSGAHIWPDDIT-KWPICTEQARSNHTGFLHMD-CEI 358
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,745,283
Number of Sequences: 237096
Number of extensions: 1134055
Number of successful extensions: 2562
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2562
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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