Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_N21
(601 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666 64 1e-10
03_06_0479 + 34217170-34217172,34217337-34217786 60 1e-09
03_06_0480 + 34218403-34218405,34219071-34219127,34220047-342203... 58 5e-09
03_06_0174 - 32141956-32141985,32143658-32144452,32147645-321477... 58 7e-09
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 55 5e-08
02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393 55 5e-08
05_01_0103 + 686770-687017,687120-687270 50 1e-06
10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378 49 2e-06
07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318 48 4e-06
07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084 37 0.014
10_08_0472 - 18154797-18155048,18155332-18156318,18156424-181565... 29 2.2
02_05_0847 + 32183249-32183486,32184001-32184118,32184231-321843... 29 2.8
05_03_0245 + 10890555-10890962 29 3.8
05_03_0244 + 10857139-10857516 29 3.8
10_01_0001 - 22485-22526,23308-23436,24346-24473,24801-24862,253... 28 6.6
09_03_0002 - 11387119-11387780,11388756-11388954,11389033-113891... 28 6.6
04_03_0226 - 12977443-12977895 28 6.6
01_01_0612 + 4565422-4565481,4565597-4565671,4565760-4566332,456... 27 8.7
>12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666
Length = 145
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Frame = +3
Query: 342 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGGRNAEYDSFLEDLQKGG 518
+SG+ V+ CK T+ E+++ K HRYV+F I D+ K++ VE G +D F++ L +
Sbjct: 11 SSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPE-- 68
Query: 519 TGECRYGLFDFEYT--HQCQ 572
+CRY ++DF++ CQ
Sbjct: 69 -SDCRYAIYDFDFVTEENCQ 87
>03_06_0479 + 34217170-34217172,34217337-34217786
Length = 150
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = +3
Query: 345 SGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGGRNAEYDSFLEDLQKGGT 521
SGV VS+ CK ++E++ + HR+VVF I D +Q+ V+ VG R+A +D L G
Sbjct: 6 SGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADG- 64
Query: 522 GECRYGLFDFEYT 560
CRY ++D ++T
Sbjct: 65 --CRYAVYDHDFT 75
>03_06_0480 +
34218403-34218405,34219071-34219127,34220047-34220312,
34220402-34220552
Length = 158
Score = 58.0 bits (134), Expect = 5e-09
Identities = 23/73 (31%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = +3
Query: 342 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGGRNAEYDSFLEDLQKGG 518
+SGV + D CK + E++ + HR++ F + ++ K+I V+ +G R Y+ F L +
Sbjct: 24 SSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPE-- 81
Query: 519 TGECRYGLFDFEY 557
G+CR+ ++DF++
Sbjct: 82 -GDCRFAIYDFDF 93
>03_06_0174 -
32141956-32141985,32143658-32144452,32147645-32147759,
32148134-32148399,32150193-32150213
Length = 408
Score = 57.6 bits (133), Expect = 7e-09
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +3
Query: 330 HQKMASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGGRNAEYDSFLEDL 506
H +SG+ V+ + T+ E++ K RYV+F I + +KQ+ VE G YD FL L
Sbjct: 7 HSNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASL 66
Query: 507 QKGGTGECRYGLFDFEY 557
+ +CRY L+DF++
Sbjct: 67 PE---NDCRYALYDFDF 80
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 54.8 bits (126), Expect = 5e-08
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = +3
Query: 342 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGGRNAEYDSFLEDLQKGG 518
ASG+ V D CK ++E+K + R++ F I + +Q+ V+ +G YD F +
Sbjct: 269 ASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMP--- 325
Query: 519 TGECRYGLFDFEYT--HQCQ 572
ECRY +FDF++ CQ
Sbjct: 326 ASECRYAVFDFDFVTDENCQ 345
>02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393
Length = 158
Score = 54.8 bits (126), Expect = 5e-08
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Frame = +3
Query: 342 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGGRNAEYDSFLEDLQKGG 518
ASG+ V D CK + E+K + R++VF I ++ +Q+ V+ +G YD F L
Sbjct: 24 ASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLP--- 80
Query: 519 TGECRYGLFDFEYT--HQCQ 572
ECRY +FDF++ CQ
Sbjct: 81 ADECRYAVFDFDFVTDENCQ 100
>05_01_0103 + 686770-687017,687120-687270
Length = 132
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +3
Query: 351 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQ-IDVETVGGRNAEYDSFLEDLQKGGTGE 527
+ V D CK + E+K + +R++++ I ++K+ + VE VG YD F L E
Sbjct: 1 MAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLP---ANE 57
Query: 528 CRYGLFDFEYT--HQCQ 572
CRY +FD+++ CQ
Sbjct: 58 CRYAIFDYDFVTEENCQ 74
>10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378
Length = 153
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 351 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEK-QIDVETVGGRNAEYDSFLEDLQKGGTGE 527
+ V + K+ + E+K+ K HRYV+F I D + +I VE G YD F L +
Sbjct: 20 IEVPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLP---ADD 76
Query: 528 CRYGLFDFEY 557
CRY ++D ++
Sbjct: 77 CRYAVYDLDF 86
>07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318
Length = 145
Score = 48.4 bits (110), Expect = 4e-06
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Frame = +3
Query: 348 GVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGGRNAEYDSFLEDLQKGGTG 524
G+ V+D CK ++E+K + R++VF I D+ +I VE +G Y+ F L
Sbjct: 13 GLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLP---AD 69
Query: 525 ECRYGLFDFEYT--HQCQ 572
ECRY ++D ++ CQ
Sbjct: 70 ECRYAVYDLDFVTDENCQ 87
>07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084
Length = 169
Score = 36.7 bits (81), Expect = 0.014
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 351 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEK-QIDVETVGGRNAEYDSFLEDL 506
+ V + K+ + E+ + K HRYV+F I D + +I VE G YD F L
Sbjct: 40 IEVPEKSKSAFWELMRRKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASL 92
>10_08_0472 -
18154797-18155048,18155332-18156318,18156424-18156546,
18156654-18156808,18157611-18157824,18158977-18159077,
18159162-18159285,18159584-18159655,18159897-18159961,
18160167-18160233,18160917-18161015,18161099-18161167,
18161286-18161409,18162507-18162566,18163111-18163634
Length = 1011
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 545 EETISAFSGAALLQVFEKAIVFGITSADGFDVD 447
+ET+ A ++FEK +V I+S DG+D +
Sbjct: 541 QETVDAVHSEICGKLFEKVVVEAISSVDGYDTN 573
>02_05_0847 +
32183249-32183486,32184001-32184118,32184231-32184376,
32184591-32186080
Length = 663
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 562 CVYSKSKRPYLHSPVPPFCRSSRKLSYSALRP 467
CV S S P LHSP CR+ +++ + ++P
Sbjct: 615 CVRSTSVEPCLHSPPILSCRAKKEVDAATVKP 646
>05_03_0245 + 10890555-10890962
Length = 135
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 181 G*CVDSGNCFDACADWSL*KKDCQHSEQCRSGRC 282
G CVD+G + C + K C+H C GRC
Sbjct: 75 GRCVDTGASGEHCGGCN---KACKHGRSCCGGRC 105
>05_03_0244 + 10857139-10857516
Length = 125
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 181 G*CVDSGNCFDACADWSL*KKDCQHSEQCRSGRC 282
G CVD+G + C + K C+H C GRC
Sbjct: 66 GRCVDTGASGEHCGGCN---KACKHGRSCCGGRC 96
>10_01_0001 -
22485-22526,23308-23436,24346-24473,24801-24862,
25388-25585,25807-25898,26941-26994
Length = 234
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -1
Query: 556 YSKSKRPYLHSPVPPFCRSSRKLSYSALRPPTVSTS 449
Y + K P SP PP SS +S S PP + S
Sbjct: 50 YEELKPPSSPSPTPPSAASSASVSASPDTPPAAAAS 85
>09_03_0002 -
11387119-11387780,11388756-11388954,11389033-11389106,
11389840-11390323,11390439-11390450
Length = 476
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -3
Query: 377 RFASVRYCHTRRHFLMLKHVKIAPLILTTPRQQRPERHCSECWQSF 240
R A Y ++ + +K++ + P P +Q P+R+C E QSF
Sbjct: 128 RIAISDYSVNQQDAVRMKYIALGPC--RPPLEQFPQRNCGEMQQSF 171
>04_03_0226 - 12977443-12977895
Length = 150
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 429 IRDEKQIDVETVGGRNAEYDSFLEDLQKGG 518
+R+E +D+E GG AE + DL+ GG
Sbjct: 112 MREEAAVDLEPGGGGGAEEEEAAVDLEPGG 141
>01_01_0612 +
4565422-4565481,4565597-4565671,4565760-4566332,
4566438-4566551,4566676-4567377
Length = 507
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 429 IRDEKQIDVETVGGR-NAEYDSFLEDLQKGGT 521
+RDEK++DV +GG ++SF Q+ T
Sbjct: 10 VRDEKKVDVAAIGGAPPIVFESFAPSTQRDST 41
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,880,958
Number of Sequences: 37544
Number of extensions: 286337
Number of successful extensions: 826
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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