Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_N19
(296 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83129-7|CAB05644.1| 256|Caenorhabditis elegans Hypothetical pr... 29 0.45
AL021508-1|CAA16431.1| 170|Caenorhabditis elegans Hypothetical ... 29 0.45
Z68108-1|CAA92134.1| 194|Caenorhabditis elegans Hypothetical pr... 28 1.0
L16560-3|AAA27998.1| 195|Caenorhabditis elegans Hypothetical pr... 28 1.4
U13071-2|AAL65793.1| 988|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical pr... 27 3.2
U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical pr... 26 5.6
AF016683-9|AAB66197.1| 299|Caenorhabditis elegans Hypothetical ... 26 5.6
AF100656-3|AAF99968.1| 265|Caenorhabditis elegans Hypothetical ... 25 7.4
U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily ass... 25 9.7
U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily ass... 25 9.7
>Z83129-7|CAB05644.1| 256|Caenorhabditis elegans Hypothetical
protein W06G6.12 protein.
Length = 256
Score = 29.5 bits (63), Expect = 0.45
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -1
Query: 161 FAWGDGVWWWYFKRIDSDEGHCCHN-RCRIQEH 66
FA + +W KR+ S E H C N CR++ H
Sbjct: 117 FAHWECCAYWVSKRMSSQEHHTCPNCNCRVKAH 149
>AL021508-1|CAA16431.1| 170|Caenorhabditis elegans Hypothetical
protein Y70C5B.1 protein.
Length = 170
Score = 29.5 bits (63), Expect = 0.45
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -1
Query: 161 FAWGDGVWWWYFKRIDSDEGHCCHN-RCRIQEH 66
FA + +W KR+ S E H C N CR++ H
Sbjct: 31 FAHWECCAYWVSKRMSSQEHHTCPNCNCRVKAH 63
>Z68108-1|CAA92134.1| 194|Caenorhabditis elegans Hypothetical
protein T05A10.2 protein.
Length = 194
Score = 28.3 bits (60), Expect = 1.0
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -3
Query: 192 LELNYQASLWLCLG*WCMVVV 130
L +N ++ W+ +G WC+VV+
Sbjct: 158 LNINIGSAFWMAVGAWCLVVI 178
>L16560-3|AAA27998.1| 195|Caenorhabditis elegans Hypothetical
protein D2007.2 protein.
Length = 195
Score = 27.9 bits (59), Expect = 1.4
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 141 YTITPSKATVKPGNSIPVII 200
Y +TP ATV+PG S+P+ I
Sbjct: 117 YRVTPVYATVEPGQSLPLHI 136
>U13071-2|AAL65793.1| 988|Caenorhabditis elegans Hypothetical
protein T22F7.3 protein.
Length = 988
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 132 PPPYTI--TPSKATVKPGNSIPVIIKSMAPYVKMRN 233
P P T+ PS + PGN +PV+ S++ V+ N
Sbjct: 137 PNPATVLANPSTHPLNPGNYMPVLCNSLSSEVRTSN 172
>Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical
protein C16C10.7 protein.
Length = 235
Score = 26.6 bits (56), Expect = 3.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 68 VPVYDSGCDSSDPRR 112
VP+Y G DSSDPR+
Sbjct: 76 VPIYGRGGDSSDPRK 90
>U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical
protein R09H3.1 protein.
Length = 1073
Score = 25.8 bits (54), Expect = 5.6
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 128 STTTIHHHPKQSHSEAW*FNSSDYQE 205
+ TTIHH P E+ +N S Y +
Sbjct: 457 AVTTIHHSPNNDQYESEYYNPSSYDK 482
>AF016683-9|AAB66197.1| 299|Caenorhabditis elegans Hypothetical
protein K09F6.7 protein.
Length = 299
Score = 25.8 bits (54), Expect = 5.6
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = +2
Query: 35 KTAQHKDHYYDVPVYDSGCDSSDPRRCQCA*STTTIHHHPKQS 163
K H D+ + + C S C+ ST + HH K+S
Sbjct: 93 KCKHHPDYLVETVCVEEDCSESGKYMCRKCVSTLSHLHHTKKS 135
>AF100656-3|AAF99968.1| 265|Caenorhabditis elegans Hypothetical
protein F49F1.1 protein.
Length = 265
Score = 25.4 bits (53), Expect = 7.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 53 DHYYDVPVYDSGCDSSDPRRCQCA 124
D Y+D +YD+ C+S +R QCA
Sbjct: 57 DTYFDCDMYDTKCNSPSFQR-QCA 79
>U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily assigned
gene nameprotein 149, isoform a protein.
Length = 1091
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 144 TITPSKATVKPGNSIPVIIKSMAPYVKMRNIYLQARLGD 260
T+TP+ A P N P+I ++M K R+ ++ + D
Sbjct: 939 TVTPTVALSGPTNFAPLIYQAMEICQKSRDYHILVIIAD 977
>U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily assigned
gene nameprotein 149, isoform b protein.
Length = 1107
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 144 TITPSKATVKPGNSIPVIIKSMAPYVKMRNIYLQARLGD 260
T+TP+ A P N P+I ++M K R+ ++ + D
Sbjct: 955 TVTPTVALSGPTNFAPLIYQAMEICQKSRDYHILVIIAD 993
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,237,185
Number of Sequences: 27780
Number of extensions: 142422
Number of successful extensions: 357
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 357
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 302276744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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