Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_N14
         (545 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U95740-1|AAC31662.1| 1199|Homo sapiens Unknown gene product prot...    33   0.86 
D86097-1|BAA19958.1|  402|Homo sapiens prostaglandin EP3 recepto...    30   4.6  

>U95740-1|AAC31662.1| 1199|Homo sapiens Unknown gene product protein.
          Length = 1199

 Score = 32.7 bits (71), Expect = 0.86
 Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
 Frame = +3

Query: 87   YSFIIYVYLSIKFNATKISIKSLERVMNPYIYLLRTNKLLHSRCYHQLPFLEF---YQQT 257
            +  +++V+  + F  T   ++   ++ + Y++      LLH+  Y Q+   EF   Y + 
Sbjct: 911  FFIVVFVFFIVVFVFTNDKMEECVKLTSLYLFAKNVRSLLHTYHYQQIFLHEFSMAYTKY 970

Query: 258  TGLTICNKSFDKIKKKHPHIQTLSHERLQCTLQILQKFG 374
             G T+  K++      H  ++ L     Q  +Q LQK G
Sbjct: 971  VGETLQPKTYG-----HSSVEELLGAIPQVVVQFLQKNG 1004


>D86097-1|BAA19958.1|  402|Homo sapiens prostaglandin EP3 receptor
           subtype isoform protein.
          Length = 402

 Score = 30.3 bits (65), Expect = 4.6
 Identities = 19/74 (25%), Positives = 36/74 (48%)
 Frame = +3

Query: 138 ISIKSLERVMNPYIYLLRTNKLLHSRCYHQLPFLEFYQQTTGLTICNKSFDKIKKKHPHI 317
           + + SL ++++P++YLL    LL   C  Q+      +Q  G     + F    ++ P  
Sbjct: 332 VRLASLNQILDPWVYLLLRKILLRKFC--QMRKRRLREQEMGPD--GRCFCHAWRQVPRT 387

Query: 318 QTLSHERLQCTLQI 359
              SH+R  C++Q+
Sbjct: 388 WCSSHDREPCSVQL 401


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,835,145
Number of Sequences: 237096
Number of extensions: 1117828
Number of successful extensions: 2205
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2205
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)