Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_N14
         (545 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41106-2|AAA82410.1|  797|Caenorhabditis elegans Hypothetical pr...    31   0.41 
AF078782-1|AAC26913.1|  361|Caenorhabditis elegans Hypothetical ...    31   0.54 
U13019-5|AAC24444.1|  994|Caenorhabditis elegans Hypothetical pr...    28   3.8  
Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical pr...    27   6.7  
AF106573-3|AAF02106.1|  198|Caenorhabditis elegans Hypothetical ...    27   6.7  
AL031635-11|CAA21038.3|  446|Caenorhabditis elegans Hypothetical...    27   8.8  

>U41106-2|AAA82410.1|  797|Caenorhabditis elegans Hypothetical
           protein W06A11.2 protein.
          Length = 797

 Score = 31.5 bits (68), Expect = 0.41
 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
 Frame = +3

Query: 204 LHSRCYHQLPFLEFYQQTTGLTICNKSFDKIKKKHPHIQTLSHERLQCTLQILQK-FGIT 380
           L+  C   LP L+F    T   I N   +KI   HP ++T+S    QC    +Q  F +T
Sbjct: 330 LYVECGKGLPNLKF-MDCTATDINNDLLEKILISHPKLETISAIGKQCLGNFMQYIFPVT 388

Query: 381 PLEACQNIHIFSMNPITMDNYGEILKEC 464
            L    +  +  +    +D+    L +C
Sbjct: 389 NLHRVSDSGVCVLQTDAIDSAVTSLIQC 416


>AF078782-1|AAC26913.1|  361|Caenorhabditis elegans Hypothetical
           protein H34P18.1 protein.
          Length = 361

 Score = 31.1 bits (67), Expect = 0.54
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +3

Query: 51  IICNYISPYKRAYSFIIYVYLSIKFNATKISIKSLERVMNPYIYLLRTNKLLHSRCYHQL 230
           I  N ++ +    SFIIY  LS KF      +     ++   IYL R+  ++HS  +   
Sbjct: 301 IFINILAFFNSTTSFIIYSSLSAKFRKIFAQLFFPTHILET-IYLKRSTNVVHSVAHASR 359

Query: 231 PF 236
           PF
Sbjct: 360 PF 361


>U13019-5|AAC24444.1|  994|Caenorhabditis elegans Hypothetical
           protein T12A2.5 protein.
          Length = 994

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
 Frame = +3

Query: 228 LPFLEFYQQT---TGL-TICNKSFDK-IKKKHPHIQTLSHERLQCTL-QILQKFGITPLE 389
           +PF +F+ Q    TGL TI    F K +K+    +   + E  +  L Q L K  +T  E
Sbjct: 309 IPFFKFFSQEDVPTGLKTIVEALFKKKVKRSDMTMDVTNLENEEKPLFQDLDKL-VTTDE 367

Query: 390 ACQNIHIFSMNPITMDNYGEILKECQFV 473
           + Q + +     + +DN   I  +CQF+
Sbjct: 368 SYQEVFLAMQMLLEIDNLDVINAKCQFI 395


>Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical protein
            F54F12.1 protein.
          Length = 1217

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 273  CNKSFDKIKKKHPHIQTLSHERLQ 344
            C+K  ++ KK HP+ +   +ER Q
Sbjct: 1184 CDKKLEEFKKAHPNYEVRKYERAQ 1207


>AF106573-3|AAF02106.1|  198|Caenorhabditis elegans Hypothetical
           protein F52D2.10 protein.
          Length = 198

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 56  NNNIFSIRFLSQDLFFNF 3
           NNN+F I+ +S+  FFNF
Sbjct: 175 NNNLFEIKCMSRQHFFNF 192


>AL031635-11|CAA21038.3|  446|Caenorhabditis elegans Hypothetical
           protein Y47D3B.3 protein.
          Length = 446

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 341 SMYITNTTKIWHYTSRSLSKHSYFF 415
           S+ + N T I HY + SLS  S+FF
Sbjct: 63  SLLLFNHTYISHYATLSLSSFSFFF 87


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,599,829
Number of Sequences: 27780
Number of extensions: 207147
Number of successful extensions: 518
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)