Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_N14
         (545 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   2.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.0  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    22   3.5  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    22   3.5  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    22   4.7  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   4.7  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   6.2  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   6.2  
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    21   8.2  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/40 (22%), Positives = 18/40 (45%)
 Frame = +3

Query: 216 CYHQLPFLEFYQQTTGLTICNKSFDKIKKKHPHIQTLSHE 335
           C  + P     ++T    +C K+FD+      H+++   E
Sbjct: 48  CGSETPLTNIEEKTYQCLLCQKAFDQKNLYQSHLRSHGKE 87



 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/29 (31%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +3

Query: 270 ICNKSFDKIKKKHPHIQTLSHER-LQCTL 353
           +C ++F+   K H H++  + ER  +CT+
Sbjct: 152 VCERAFEHSGKLHRHMRIHTGERPHKCTV 180


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 405 HIFSMNPITMDNYGEILKECQFVQIS 482
           HI    P  + NY E +KE +F+ ++
Sbjct: 892 HILDKLPTLISNYIEAVKEGKFMNVN 917


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +2

Query: 449 NTKRMSVCTNISRIYYKVSY 508
           N  +   C N  ++YY ++Y
Sbjct: 94  NNYKKLYCNNYKKLYYNINY 113


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +2

Query: 449 NTKRMSVCTNISRIYYKVSY 508
           N  +   C N  ++YY ++Y
Sbjct: 94  NNYKKLYCNNYKKLYYNINY 113


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +2

Query: 449 NTKRMSVCTNISRIYYKVSY 508
           N  +   C N  ++YY ++Y
Sbjct: 94  NNYKKLYCNNYRKLYYNINY 113


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 273 CNKSFDKIKKKHPHI 317
           C K  DK K++ PHI
Sbjct: 396 CKKKDDKPKRRLPHI 410


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 11/52 (21%), Positives = 22/52 (42%)
 Frame = +2

Query: 356 NTTKIWHYTSRSLSKHSYFFNESDYYG*LW*NTKRMSVCTNISRIYYKVSYN 511
           N  K++ Y  +  +  +      ++ G ++   K    C N  R  YK++ N
Sbjct: 457 NIDKLYTYFDKCDTLINNAVAVENFKGGMYLRLKARRACMNYERFTYKININ 508


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 11/52 (21%), Positives = 22/52 (42%)
 Frame = +2

Query: 356 NTTKIWHYTSRSLSKHSYFFNESDYYG*LW*NTKRMSVCTNISRIYYKVSYN 511
           N  K++ Y  +  +  +      ++ G ++   K    C N  R  YK++ N
Sbjct: 457 NIDKLYTYFDKCDTLINNAVAVENFKGGMYLRLKARRACMNYERFTYKININ 508


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 152

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/44 (15%), Positives = 23/44 (52%)
 Frame = +3

Query: 96  IIYVYLSIKFNATKISIKSLERVMNPYIYLLRTNKLLHSRCYHQ 227
           ++Y++LS K   T  ++  +   ++ ++ +   +  +   CY++
Sbjct: 39  VVYIFLSTKSLRTPSNLFVINLAISDFLMMFCMSPPMVINCYYE 82


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,926
Number of Sequences: 438
Number of extensions: 2787
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)