Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_N04
         (312 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97198-1|CAA65832.1| 1430|Homo sapiens receptor phosphatase PCP-...    29   2.2  
U43769-1|AAB01803.1|  128|Homo sapiens Ig light chain variable r...    27   8.8  
M65261-1|AAA83932.1|  454|Homo sapiens carboxylesterase protein.       27   8.8  

>X97198-1|CAA65832.1| 1430|Homo sapiens receptor phosphatase PCP-2
            protein.
          Length = 1430

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +3

Query: 171  EVVARACVVKDLSEIDQLQQGDVLITHATDIGWSPYFPXAD 293
            ++VAR   V+++S   +LQ+GD+L+ H   + WS Y    D
Sbjct: 1299 DLVARVFRVQNIS---RLQEGDLLVRHFQFLRWSAYRDTPD 1336


>U43769-1|AAB01803.1|  128|Homo sapiens Ig light chain variable
           region protein.
          Length = 128

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 226 NKAMY*SHTRQTSGGHHIFPLLTXVSPL 309
           ++A Y  H+R  SG HH+F   T V+ L
Sbjct: 100 DEADYYCHSRDNSGNHHVFGTGTKVTVL 127


>M65261-1|AAA83932.1|  454|Homo sapiens carboxylesterase protein.
          Length = 454

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +3

Query: 87  GWVVPLEVMKPALSSGDM-KITATSVCGGEVVARACVVKDL 206
           GW++P+++M   LS G + + TA S+ G  +   A + K+L
Sbjct: 243 GWLIPMQLMSYPLSEGQLDQKTAMSLLGSPIPLFA-IAKEL 282


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,985,190
Number of Sequences: 237096
Number of extensions: 807806
Number of successful extensions: 1232
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1459139350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)