Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_N04
         (312 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical pr...    70   3e-13
AF067218-1|AAC17021.1| 1451|Caenorhabditis elegans Hypothetical ...    29   0.52 
U28943-10|AAA68362.1|  329|Caenorhabditis elegans Dehydrogenases...    28   1.2  
Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical pr...    27   2.8  
AF025463-4|AAB71010.2|  344|Caenorhabditis elegans Serpentine re...    27   2.8  
U41026-3|AAL02447.3|  817|Caenorhabditis elegans Hypothetical pr...    25   8.4  
AC024785-2|AAF60599.2|  467|Caenorhabditis elegans C-type lectin...    25   8.4  

>Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical protein
            T21C9.6 protein.
          Length = 1215

 Score = 70.1 bits (164), Expect = 3e-13
 Identities = 38/101 (37%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
 Frame = +3

Query: 12   LLKKAIQRQQYYPKWAKLKFAEINKGWVVPLEVMKPALSSG-DMKITATSVCGGEVVARA 188
            L+ +AI+R+Q   K+  L+F  ++ G++ P+++      +   + +  T+VC G+V ARA
Sbjct: 1063 LVSRAIRRKQISSKFEGLQFPLVSHGYMNPIKIEIAETDANIGIILRGTTVCEGKVRARA 1122

Query: 189  CVVKDLSEIDQLQQGDVLITHATDIGWSPYFPXADXGIATE 311
             V K L E  + + G++LIT  TDI WSP+FP    GI TE
Sbjct: 1123 RVAKTLEEAKETKPGEILITKYTDICWSPFFPII-SGIVTE 1162


>AF067218-1|AAC17021.1| 1451|Caenorhabditis elegans Hypothetical
           protein K10E9.1 protein.
          Length = 1451

 Score = 29.5 bits (63), Expect = 0.52
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +1

Query: 148 PQHLCVVEKSLLERVSSRIYLRSINFNKAM 237
           P H+   EKS L+ +   +YL+ +N +K+M
Sbjct: 901 PPHISTNEKSFLQHLRFHLYLKMMNISKSM 930


>U28943-10|AAA68362.1|  329|Caenorhabditis elegans Dehydrogenases,
           short chain protein7 protein.
          Length = 329

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -2

Query: 182 SNDFSTTHRCCGYFHIARTQGGFHNFKWDDPTFVY 78
           S   STT  C G+  +A   G + +  WDD   +Y
Sbjct: 259 SQGASTTVYCAGHPEVANVSGKYWDSNWDDEKGLY 293


>Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical
           protein R07E5.2 protein.
          Length = 226

 Score = 27.1 bits (57), Expect = 2.8
 Identities = 19/57 (33%), Positives = 28/57 (49%)
 Frame = +3

Query: 21  KAIQRQQYYPKWAKLKFAEINKGWVVPLEVMKPALSSGDMKITATSVCGGEVVARAC 191
           K I  Q Y  KW  + F  ++  +V P E+    ++ GD      S+ G EVVA +C
Sbjct: 53  KVISDQDYKGKWLVMFFYPLDFTFVCPTEI----IAYGDRANEFRSL-GAEVVACSC 104


>AF025463-4|AAB71010.2|  344|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 3 protein.
          Length = 344

 Score = 27.1 bits (57), Expect = 2.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 87  GWVVPLEVMKPALSSGDMKITATSV 161
           GW  P  ++KP ++S  +  TA SV
Sbjct: 316 GWFFPTSLLKPVIASAMLSSTAASV 340


>U41026-3|AAL02447.3|  817|Caenorhabditis elegans Hypothetical
           protein C28G1.3 protein.
          Length = 817

 Score = 25.4 bits (53), Expect = 8.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 176 DFSTTHRCCGYFHIARTQGGFHNF 105
           DF+  HRCC  F++   +  F  +
Sbjct: 304 DFTPVHRCCQIFNVLGAKEEFEQY 327


>AC024785-2|AAF60599.2|  467|Caenorhabditis elegans C-type lectin
           protein 71 protein.
          Length = 467

 Score = 25.4 bits (53), Expect = 8.4
 Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -2

Query: 140 HIARTQGGFHNFKWDDPTFVYFGKF*FGP-FW 48
           H+  +   + N KW +P+F Y  KF   P +W
Sbjct: 384 HLPVSNVQYVNLKWYNPSFPYSDKFEMQPVYW 415


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,893,047
Number of Sequences: 27780
Number of extensions: 121291
Number of successful extensions: 318
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 318
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 344570176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)