Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_N03
         (602 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC020626-1|AAH20626.1|  278|Homo sapiens ZNF277P protein protein.      29   9.5  
AF308819-1|AAL55819.1|  450|Homo sapiens nuclear receptor-intera...    29   9.5  
AF209198-1|AAF85941.1|  438|Homo sapiens zinc finger protein 277...    29   9.5  
AC004112-2|AAS07408.1|  259|Homo sapiens unknown protein.              29   9.5  
AC004112-1|AAS07407.1|  419|Homo sapiens unknown protein.              29   9.5  

>BC020626-1|AAH20626.1|  278|Homo sapiens ZNF277P protein protein.
          Length = 278

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -3

Query: 177 CSYCQLPYYSTMRCSMHLKIRQPIKIN*KKYRYDNVYTI 61
           C YC+  +        H++ +Q  KIN K   YD  Y I
Sbjct: 214 CLYCEKTFRDKNTLKDHMRKKQHRKINPKNREYDRFYVI 252


>AF308819-1|AAL55819.1|  450|Homo sapiens nuclear
           receptor-interacting factor protein.
          Length = 450

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -3

Query: 177 CSYCQLPYYSTMRCSMHLKIRQPIKIN*KKYRYDNVYTI 61
           C YC+  +        H++ +Q  KIN K   YD  Y I
Sbjct: 226 CLYCEKTFRDKNTLKDHMRKKQHRKINPKNREYDRFYVI 264


>AF209198-1|AAF85941.1|  438|Homo sapiens zinc finger protein 277
           protein.
          Length = 438

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -3

Query: 177 CSYCQLPYYSTMRCSMHLKIRQPIKIN*KKYRYDNVYTI 61
           C YC+  +        H++ +Q  KIN K   YD  Y I
Sbjct: 214 CLYCEKTFRDKNTLKDHMRKKQHRKINPKNREYDRFYVI 252


>AC004112-2|AAS07408.1|  259|Homo sapiens unknown protein.
          Length = 259

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -3

Query: 177 CSYCQLPYYSTMRCSMHLKIRQPIKIN*KKYRYDNVYTI 61
           C YC+  +        H++ +Q  KIN K   YD  Y I
Sbjct: 195 CLYCEKTFRDKNTLKDHMRKKQHRKINPKNREYDRFYVI 233


>AC004112-1|AAS07407.1|  419|Homo sapiens unknown protein.
          Length = 419

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -3

Query: 177 CSYCQLPYYSTMRCSMHLKIRQPIKIN*KKYRYDNVYTI 61
           C YC+  +        H++ +Q  KIN K   YD  Y I
Sbjct: 195 CLYCEKTFRDKNTLKDHMRKKQHRKINPKNREYDRFYVI 233


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,748,892
Number of Sequences: 237096
Number of extensions: 1307920
Number of successful extensions: 5801
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5801
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)