Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_M24
         (573 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        27   0.33 
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   1.3  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   7.1  
AF457554-1|AAL68784.1|  269|Anopheles gambiae salivary gland 1-l...    23   9.3  

>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 27.5 bits (58), Expect = 0.33
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +3

Query: 210 RRYSMRSAANWTPLSRTSDYSRRNHSSCTHANYAPALTDPR 332
           R Y+    A +TP+ RT+      HS  T    AP+   PR
Sbjct: 25  RYYTQAPQARYTPMVRTAQRVALRHSFETDGTPAPSTVRPR 65


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 571 ILKPCAEFLPLCKYR 527
           + +PCAEF P  KYR
Sbjct: 677 VAEPCAEFFPQPKYR 691


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = -3

Query: 181  RARYKSRA-RPPSAL*VPRAISERAISTARDLRARY-KYRARSPSAL 47
            R R   RA RPPS    PR  + RA     DLR R  ++RAR   A+
Sbjct: 1058 RQRELQRAGRPPSPPPSPRTAARRA-----DLRLRQARFRARRRQAI 1099


>AF457554-1|AAL68784.1|  269|Anopheles gambiae salivary gland 1-like
           3 protein protein.
          Length = 269

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 295 VQEEWLRRL*SEVLDSGVQFAADLMEY 215
           V E WL  L +      V+FA D  EY
Sbjct: 128 VVERWLAELQAGTFHEVVEFARDYPEY 154


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 461,973
Number of Sequences: 2352
Number of extensions: 6790
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)