Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_M23
(311 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomy... 48 2e-07
SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|c... 27 0.65
SPAC637.03 |||conserved fungal protein|Schizosaccharomyces pombe... 25 2.0
SPAC13A11.02c |erg11||sterol 14-demethylase|Schizosaccharomyces ... 25 2.6
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 24 4.6
SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor Thi1|Sc... 24 4.6
SPAC12B10.03 |||WD repeat protein, human WDR20 family|Schizosacc... 24 4.6
SPAC6F6.13c |||DUF726 family protein|Schizosaccharomyces pombe|c... 24 4.6
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 24 6.1
SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces ... 24 6.1
SPBC1703.07 |||ATP citrate synthase subunit 1 |Schizosaccharomyc... 23 8.1
SPBC354.06 |mrps16||mitochondrial ribosomal protein subunit S16|... 23 8.1
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 23 8.1
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 23 8.1
SPAC17C9.10 |stm1||G-protein coupled receptor Stm1|Schizosacchar... 23 8.1
>SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 541
Score = 48.4 bits (110), Expect = 2e-07
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 5 TLDDRKNMPYTEACIREMMRYETLVPLSVPHRAMKQTTIG-GYNVPEGTMLSPNLMMLHM 181
+LD + M YT A ++E +R V L VP+R K I Y VP+ M+ P L
Sbjct: 362 SLDLMEKMTYTRAVVKECLRLRPPV-LMVPYRVKKAFPITPDYTVPKDAMVIPTLYGALH 420
Query: 182 DKGIWGDPENFRPERFIVDG 241
D ++ +PE F P+R+ +G
Sbjct: 421 DSKVYPEPETFNPDRWAPNG 440
>SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 801
Score = 27.1 bits (57), Expect = 0.65
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 89 VPHRAMK-QTTIGGYNVPEGTMLSPNLMMLH-MDKGIWGDPEN 211
V + +K QT + + P+G L P+ +MLH D I EN
Sbjct: 462 VDEKGLKFQTALNNLSTPKGKSLRPSKLMLHNQDSSILFQTEN 504
>SPAC637.03 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 269
Score = 25.4 bits (53), Expect = 2.0
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 142 LWDIISAYSSLLHCT 98
LW ++ A+S+ LHCT
Sbjct: 153 LWFVVYAFSAALHCT 167
>SPAC13A11.02c |erg11||sterol 14-demethylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 495
Score = 25.0 bits (52), Expect = 2.6
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 270 LPFGAGKRLCAGE 308
LPFGAG+ C GE
Sbjct: 433 LPFGAGRHRCIGE 445
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 24.2 bits (50), Expect = 4.6
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 241 TTLCC*GPNRCLLELGKD 294
T++ C GP RCLLE ++
Sbjct: 935 TSVPCIGPERCLLEFYRE 952
>SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor
Thi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 24.2 bits (50), Expect = 4.6
Identities = 9/40 (22%), Positives = 18/40 (45%)
Frame = +2
Query: 20 KNMPYTEACIREMMRYETLVPLSVPHRAMKQTTIGGYNVP 139
+N Y + C+ R + L + H+ + + G +VP
Sbjct: 543 ENRRYIQLCVESATRVINIAHLLLTHKCLSSLSFFGLHVP 582
>SPAC12B10.03 |||WD repeat protein, human WDR20
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 24.2 bits (50), Expect = 4.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 191 IWGDPENFRPERFIVDGQL 247
+W DP NF+ RF +GQL
Sbjct: 221 LWYDPINFKYLRFNKNGQL 239
>SPAC6F6.13c |||DUF726 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 778
Score = 24.2 bits (50), Expect = 4.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1
Query: 205 GKLSPGEIHCRWTTLC 252
GK P +I RWT LC
Sbjct: 264 GKEKPVQIDVRWTVLC 279
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 23.8 bits (49), Expect = 6.1
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 245 LCVAKDRIVAFWSWEKT 295
L A DR V FW++EK+
Sbjct: 428 LTCAMDRTVKFWNYEKS 444
>SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2111
Score = 23.8 bits (49), Expect = 6.1
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = -1
Query: 212 SFPDHP--ICLCPCEASSDLDLTLSPLG 135
+FP+ +C PCE + L + SP+G
Sbjct: 1700 NFPEFTGRVCPAPCEGACTLGIIESPVG 1727
>SPBC1703.07 |||ATP citrate synthase subunit 1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 615
Score = 23.4 bits (48), Expect = 8.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -3
Query: 156 LNIVPSGTLYPPIVVCFIARCGTLRGTSVSY 64
+ V +GT+ PIV I C ++ T V +
Sbjct: 248 IEAVKNGTIKKPIVAWAIGTCSSMFKTEVQF 278
>SPBC354.06 |mrps16||mitochondrial ribosomal protein subunit
S16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 96
Score = 23.4 bits (48), Expect = 8.1
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -3
Query: 270 TIRSLATQSCPSTMNL 223
T+RSLA + CPS++ L
Sbjct: 79 TVRSLAEKVCPSSLYL 94
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 23.4 bits (48), Expect = 8.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 298 QSLFPAPKGNDSVLSNTKLSIDNES 224
Q LFP P ND+ +++ SI S
Sbjct: 103 QQLFPIPLQNDTAFDSSEESITKSS 127
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 23.4 bits (48), Expect = 8.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 309 FPQRKVFSQLQKATIRSLATQSCP 238
FP+R + S QKA S+ T S P
Sbjct: 492 FPERDISSASQKAAQPSVITPSVP 515
>SPAC17C9.10 |stm1||G-protein coupled receptor
Stm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 271
Score = 23.4 bits (48), Expect = 8.1
Identities = 9/35 (25%), Positives = 16/35 (45%)
Frame = +2
Query: 11 DDRKNMPYTEACIREMMRYETLVPLSVPHRAMKQT 115
DD P+T CI ++ + +P + + K T
Sbjct: 172 DDLNAWPFTAGCISSVLYFCARIPQIIKNHKAKST 206
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,480,231
Number of Sequences: 5004
Number of extensions: 30035
Number of successful extensions: 72
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 2,362,478
effective HSP length: 63
effective length of database: 2,047,226
effective search space used: 81889040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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