Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_M23
         (311 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    40   7e-06
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    33   8e-04
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    31   0.004
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   2.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   2.6  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    20   8.0  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       20   8.0  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 39.9 bits (89), Expect = 7e-06
 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
 Frame = +2

Query: 5   TLDDRKNMPYTEACIREMMRYETLVPLSVPH-RAMKQTTIGGYNVPEGTMLSPNLMMLHM 181
           T  D   M Y E C+ E +R    VPL     +   +   G Y +P G  +      LH 
Sbjct: 390 TFQDTLEMKYLERCLLETLRMYPPVPLIAREIKTDLKLASGDYTIPAGCTVVIGTFKLHR 449

Query: 182 DKGIWGDPENFRPERFI 232
              I+ +P+ F P+ F+
Sbjct: 450 QPHIYPNPDVFDPDNFL 466



 Score = 21.0 bits (42), Expect = 3.5
 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 6/33 (18%)
 Frame = +3

Query: 225 DSLSMDNFVLLRTES------LPFGAGKRLCAG 305
           D    DNF+  +T +      +PF AG R C G
Sbjct: 458 DVFDPDNFLPEKTANRHYYAFVPFSAGPRSCVG 490


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 33.1 bits (72), Expect = 8e-04
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
 Frame = +2

Query: 11  DDRKNMPYTEACIREMMRYETLVPLSVPHR-AMKQTTIGG--YNVPEGTMLSPNLMMLHM 181
           DD K M Y +   +E +R     P S+  R A+   T       +P+   +      +H 
Sbjct: 348 DDIKEMEYLDKVFKETLRMYP--PASILMRKAISDYTFNDTKITIPKEMKIWIPAFAIHR 405

Query: 182 DKGIWGDPENFRPERFIVD 238
           D  I+ +P++F PERF  D
Sbjct: 406 DSAIYPNPDSFDPERFDQD 424



 Score = 21.0 bits (42), Expect = 3.5
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 270 LPFGAGKRLCAG 305
           LPFG G R C G
Sbjct: 435 LPFGDGPRNCIG 446


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 30.7 bits (66), Expect = 0.004
 Identities = 18/77 (23%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
 Frame = +2

Query: 5   TLDDRKNMPYTEACIREMMRYETLVPLS--VPHRAMKQTTIGGYNVPEGTMLSPNLMMLH 178
           T+D+ +   Y  ACI E +R   L+P +  +     +   + GY +  GT++  +  +  
Sbjct: 371 TIDNLRKAKYLRACITESLR---LIPTTTCIARILDEPIELSGYRLTAGTVVLLHTWIAG 427

Query: 179 MDKGIWGDPENFRPERF 229
           +++  + D + + PER+
Sbjct: 428 LNEENFKDAKKYLPERW 444



 Score = 25.4 bits (53), Expect = 0.16
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +3

Query: 273 PFGAGKRLCAGE 308
           PFGAG+R+C G+
Sbjct: 458 PFGAGRRICPGK 469


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +2

Query: 137  PEGTMLSPNLMMLHMDKGIWGD 202
            P  T LSPN   L +   +W D
Sbjct: 1503 PAATFLSPNSTTLVLRLHVWPD 1524


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +2

Query: 137  PEGTMLSPNLMMLHMDKGIWGD 202
            P  T LSPN   L +   +W D
Sbjct: 1499 PAATFLSPNSTTLVLRLHVWPD 1520


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 7/30 (23%), Positives = 15/30 (50%)
 Frame = -2

Query: 178 VKHHQIWT*HCPLWDIISAYSSLLHCTMRY 89
           + +H +W  H      +S  + +L C M++
Sbjct: 107 IPNHYLWLYHDKTLLYMSKLTLVLSCAMKF 136


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 47  IREMMRYETLVPLSVPHRAMKQTT 118
           I +M+ +ET+VPL      M   T
Sbjct: 368 IEKMVDHETMVPLGERQTLMFSAT 391


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,089
Number of Sequences: 438
Number of extensions: 2164
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6595479
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)