Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_M20
         (475 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71259-4|CAA95788.2|  501|Caenorhabditis elegans Hypothetical pr...    30   0.74 
Z83319-1|CAB05908.1|  322|Caenorhabditis elegans Hypothetical pr...    30   0.98 
Z81484-3|CAB03971.1|  346|Caenorhabditis elegans Hypothetical pr...    29   2.3  
U97008-16|AAB52300.1|  303|Caenorhabditis elegans Serpentine rec...    27   5.2  
Z83104-5|CAC35810.1|  570|Caenorhabditis elegans Hypothetical pr...    27   6.9  
U41996-1|AAA83471.2|  306|Caenorhabditis elegans Serpentine rece...    27   6.9  
AB012700-1|BAA89795.1|  570|Caenorhabditis elegans FLR-4 protein.      27   6.9  
Z92837-3|CAB07402.3|  502|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical pr...    27   9.1  
U41558-3|AAK39244.1|  556|Caenorhabditis elegans Innexin protein...    27   9.1  
AF067613-11|AAN73862.2|  334|Caenorhabditis elegans Serpentine r...    27   9.1  

>Z71259-4|CAA95788.2|  501|Caenorhabditis elegans Hypothetical
           protein F13G3.3 protein.
          Length = 501

 Score = 30.3 bits (65), Expect = 0.74
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = -1

Query: 430 KNLKVISKKLSTYSWSQNLKDHIHPAPLINILTRLYND 317
           KN+K+I K  +  SW  +++ H+   P+    ++L +D
Sbjct: 395 KNIKMIEKDFNRMSWKSSVRRHLRNLPINMTYSKLISD 432


>Z83319-1|CAB05908.1|  322|Caenorhabditis elegans Hypothetical
           protein T02D1.3 protein.
          Length = 322

 Score = 29.9 bits (64), Expect = 0.98
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 9/77 (11%)
 Frame = +3

Query: 255 CYNLISHSICFLLLYLYVFTMSL---------YNLVSIFIKGAG*IWSFKFWDHEYVDNF 407
           C  ++  SI F+ LY  +FT +L         YN++  F  G   ++    W +  +DNF
Sbjct: 149 CSKVVEFSIPFIFLYPCIFTFTLNPALGLCRQYNVLYQF--GHIYVFFINNWFNVKLDNF 206

Query: 408 LLITFKFFVKLCQCTRI 458
           L+    F++ LC  T +
Sbjct: 207 LVPNAIFWLFLCTITNV 223


>Z81484-3|CAB03971.1|  346|Caenorhabditis elegans Hypothetical
           protein C47A10.6 protein.
          Length = 346

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +3

Query: 243 FNIFCYNLISHSI-CFLLLYLYVFTMSLYNLVSIFI 347
           F + CY++   S+ CF+L + Y+F + L +  +IF+
Sbjct: 90  FGVDCYDMQPSSLRCFILRFPYMFGLILSSTTTIFL 125


>U97008-16|AAB52300.1|  303|Caenorhabditis elegans Serpentine
           receptor, class sx protein24 protein.
          Length = 303

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 10/29 (34%), Positives = 21/29 (72%)
 Frame = +3

Query: 261 NLISHSICFLLLYLYVFTMSLYNLVSIFI 347
           +++S S CFL+    +F M++ +L+++FI
Sbjct: 72  SVMSSSTCFLISIYGIFAMNMQSLLALFI 100


>Z83104-5|CAC35810.1|  570|Caenorhabditis elegans Hypothetical
           protein F09B12.6 protein.
          Length = 570

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 11/35 (31%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
 Frame = +3

Query: 249 IFCYNLISHSICFLLLYLY--VFTMSLYNLVSIFI 347
           ++  N+++ SIC+LLL+L   +  +  + L+S F+
Sbjct: 415 LYFLNILTRSICYLLLFLSLGITALGSFLLISYFV 449


>U41996-1|AAA83471.2|  306|Caenorhabditis elegans Serpentine
           receptor, class sx protein22 protein.
          Length = 306

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 12/41 (29%), Positives = 27/41 (65%)
 Frame = +3

Query: 258 YNLISHSICFLLLYLYVFTMSLYNLVSIFIKGAG*IWSFKF 380
           YN I++++CF L    +F++++ +++ +FI G   ++S  F
Sbjct: 72  YN-ITNNLCFFLSIYGIFSLNMQSMIGLFI-GLDRLYSVSF 110


>AB012700-1|BAA89795.1|  570|Caenorhabditis elegans FLR-4 protein.
          Length = 570

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 11/35 (31%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
 Frame = +3

Query: 249 IFCYNLISHSICFLLLYLY--VFTMSLYNLVSIFI 347
           ++  N+++ SIC+LLL+L   +  +  + L+S F+
Sbjct: 415 LYFLNILTRSICYLLLFLSLGITALGSFLLISYFV 449


>Z92837-3|CAB07402.3|  502|Caenorhabditis elegans Hypothetical
           protein R03E1.3 protein.
          Length = 502

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 240 LFNIFCYNLISHSICFLLLYLYVFTMSLY 326
           L  + C+ + +HSICF  + L +   S Y
Sbjct: 273 LILLLCFWIETHSICFFTIMLNIILQSYY 301


>Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical protein
            F21G4.6 protein.
          Length = 1885

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 10/51 (19%)
 Frame = +3

Query: 189  YFLVEDIRIDCIQEKKKLFNIFCY----------NLISHSICFLLLYLYVF 311
            YFL     ID I   K+L NIF Y          + + HSI   +LYL  F
Sbjct: 1487 YFLTSATNIDTISNVKQLMNIFEYWYSQGIGELGDTLLHSILHTILYLSDF 1537


>U41558-3|AAK39244.1|  556|Caenorhabditis elegans Innexin protein 7
           protein.
          Length = 556

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
 Frame = +3

Query: 261 NLISHSI-CFLLLYLY-----VFTMSLYNLVSIFIKGAG*IWSFKFWDHEYVDNFLL 413
           N+  H++ C LLL L+     VF  + Y L++ F  G    W F  ++  Y ++F+L
Sbjct: 291 NVQMHTVQCVLLLNLFTEKIFVFLWAWYILLTAFTVGNLFSWLFAVFNETYNEHFIL 347


>AF067613-11|AAN73862.2|  334|Caenorhabditis elegans Serpentine
           receptor, class z protein19 protein.
          Length = 334

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 278 RMRY*IITKDIKQFFFFLNTIYTYIFNKKIKY 183
           R+ Y  +   IK FFFFL  IY     KK+ Y
Sbjct: 161 RVHYLYLAFVIKTFFFFLAIIYIGARKKKLWY 192


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,234,416
Number of Sequences: 27780
Number of extensions: 173290
Number of successful extensions: 534
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 534
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)