Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_M16
         (618 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U46673-6|AAC48149.2| 1382|Caenorhabditis elegans P-glycoprotein ...    31   0.50 
AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical ...    30   1.2  
Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AL117204-13|CAB55128.1|  286|Caenorhabditis elegans Hypothetical...    28   4.6  
AF016425-6|AAY86242.1|  104|Caenorhabditis elegans Hypothetical ...    28   6.1  
Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z74030-16|CAI79165.1|  481|Caenorhabditis elegans Hypothetical p...    27   8.1  
Z74030-15|CAI79164.1|  477|Caenorhabditis elegans Hypothetical p...    27   8.1  
Z74030-7|CAA98447.2|  559|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z74030-6|CAA98444.2|  508|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z49132-7|CAA88986.1|  403|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>U46673-6|AAC48149.2| 1382|Caenorhabditis elegans P-glycoprotein
            related protein 10 protein.
          Length = 1382

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = -1

Query: 552  IKHRCERGRRCTNLSLTCSPLRHRHVEVRNLRNIWQVFSGECF--GTEIVVVVMEEIYF 382
            +++  ER +R T    TC  + HR   +RN+  I+ +  GE    G+   ++ ++ IY+
Sbjct: 1318 VQNAFERVKRSTKTQCTCIQIAHRLSTIRNVDKIYVIVHGEIAEEGSHEQLINLKGIYY 1376


>AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical
           protein Y87G2A.5 protein.
          Length = 1050

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +1

Query: 457 PQVPNFNMSVPEWTTCQGQIGASATPLTPMFNRNDYSLGGKLNL 588
           P +P  N+ +   +  + + G  A  +TP  + NDY +G + NL
Sbjct: 348 PFIPTRNLPIFADSFVEMEFGTGAVKITPAHDHNDYEVGIRQNL 391


>Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical
           protein C05C10.2b protein.
          Length = 1553

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
 Frame = +1

Query: 388 NLFHNDNHDFSAKAFATKN-----LPNIPQVPNFNMSVP 489
           N  H+D  DF+A ++  KN     LP +P++PN  + +P
Sbjct: 530 NCRHSDAIDFAAMSYIWKNIRQQHLPKLPKLPNMVLPLP 568


>Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical
           protein C05C10.2a protein.
          Length = 1551

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
 Frame = +1

Query: 388 NLFHNDNHDFSAKAFATKN-----LPNIPQVPNFNMSVP 489
           N  H+D  DF+A ++  KN     LP +P++PN  + +P
Sbjct: 530 NCRHSDAIDFAAMSYIWKNIRQQHLPKLPKLPNMVLPLP 568


>AL117204-13|CAB55128.1|  286|Caenorhabditis elegans Hypothetical
           protein Y116A8C.22 protein.
          Length = 286

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +3

Query: 156 CTNCQLRRHLRCYGQGTYNWKRKSQAQC 239
           CT CQ   HL+C G  +  W   SQ QC
Sbjct: 256 CTKCQKWVHLKCTGIRSKQW--NSQFQC 281


>AF016425-6|AAY86242.1|  104|Caenorhabditis elegans Hypothetical
           protein F59A7.11 protein.
          Length = 104

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = +1

Query: 28  LVSVLLVGVNSRYVLVEEPGYYIEQYEDQPEQWANSRVRRQAGALTVNSDGTS 186
           L++ LL  +    V+   PG   +  ED  +     R RR  G  TV +DG++
Sbjct: 4   LINSLLFTIAILAVVWGYPGQQADHVEDLTKNRNEPRARRDLGTETVRADGSA 56


>Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical
           protein M02G9.1 protein.
          Length = 909

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -1

Query: 606 RLVESEEIQFSPQRVVITIKHRCERGRRCTNLSL-TCS 496
           R V+++  Q  PQ+V ITI   C+   RC N  L TC+
Sbjct: 248 RPVQAQVQQIQPQQVQITIPQTCQ--SRCENRCLSTCT 283


>Z74030-16|CAI79165.1|  481|Caenorhabditis elegans Hypothetical
           protein D1054.9e protein.
          Length = 481

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +1

Query: 490 EWTTCQGQIGASATPLTP 543
           +WTT  G+I AS TP+TP
Sbjct: 111 QWTTKIGRILASTTPMTP 128


>Z74030-15|CAI79164.1|  477|Caenorhabditis elegans Hypothetical
           protein D1054.9d protein.
          Length = 477

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +1

Query: 490 EWTTCQGQIGASATPLTP 543
           +WTT  G+I AS TP+TP
Sbjct: 111 QWTTKIGRILASTTPMTP 128


>Z74030-7|CAA98447.2|  559|Caenorhabditis elegans Hypothetical
           protein D1054.9b protein.
          Length = 559

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +1

Query: 490 EWTTCQGQIGASATPLTP 543
           +WTT  G+I AS TP+TP
Sbjct: 111 QWTTKIGRILASTTPMTP 128


>Z74030-6|CAA98444.2|  508|Caenorhabditis elegans Hypothetical
           protein D1054.9a protein.
          Length = 508

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +1

Query: 490 EWTTCQGQIGASATPLTP 543
           +WTT  G+I AS TP+TP
Sbjct: 111 QWTTKIGRILASTTPMTP 128


>Z49132-7|CAA88986.1|  403|Caenorhabditis elegans Hypothetical
           protein ZK666.7 protein.
          Length = 403

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +1

Query: 256 LTNQMKLGAATAGLAY--DNVNGHGATLTKTHIPGF 357
           L  +MK+  A A +AY  DNVNG    L++   PG+
Sbjct: 180 LATRMKVDVAIATVAYGQDNVNGFLRQLSQIATPGY 215


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.316    0.132    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,206,113
Number of Sequences: 27780
Number of extensions: 332733
Number of successful extensions: 838
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)