Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_M09
(649 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC24C9.12c |||glycine hydroxymethyltransferase |Schizosaccharo... 234 9e-63
SPAC18G6.04c |shm2||serine hydroxymethyltransferase Shm2 |Schizo... 232 3e-62
SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22... 28 1.0
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 27 1.8
SPAC821.12 |orb6||serine/threonine protein kinase Orb6|Schizosac... 27 3.1
SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces ... 27 3.1
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa... 27 3.1
SPAC1F5.08c |yam8|ehs1|calcium transport protein|Schizosaccharom... 27 3.1
SPBC2F12.03c |||EST1 family protein|Schizosaccharomyces pombe|ch... 26 5.4
SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit Rev3|Sch... 26 5.4
SPAC4D7.04c |||cis-prenyltransferase |Schizosaccharomyces pombe|... 26 5.4
SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 26 5.4
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 25 7.1
SPAC20H4.10 |ufd2||ubiquitin-protein ligase E4 |Schizosaccharomy... 25 7.1
SPAC3F10.17 |||ribosome biogenesis protein Ltv1|Schizosaccharomy... 25 7.1
SPAC18G6.11c |rrn3||ribosomal DNA |Schizosaccharomyces pombe|chr... 25 7.1
SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schi... 25 9.4
SPAC16A10.01 |||DUF1212 family protein|Schizosaccharomyces pombe... 25 9.4
SPAC890.04c |||ribosome biogenesis protein Ytm1 |Schizosaccharom... 25 9.4
>SPAC24C9.12c |||glycine hydroxymethyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 234 bits (572), Expect = 9e-63
Identities = 106/190 (55%), Positives = 137/190 (72%)
Frame = +3
Query: 75 NNKLLNGNLWETDPELFNLITKEKKRQQAGLEMIASENFTSVPVLQCLSSCLHNKYSEGM 254
N+ ++ L E DP + ++ E RQ++ + +IASENFTS V+ L S + NKYSEG
Sbjct: 4 NDSIMLTPLKEQDPTVAEIMRHEADRQRSSVVLIASENFTSRAVMDALGSVMSNKYSEGY 63
Query: 255 PYQRYYGGNEFIDEIEILAQNRSLETYKLNPEEWGVNVQPYSGSPANFAVYTGVVEPHGR 434
P RYYGGN+FID+IE L Q R+L + L+P +WGVNVQ SGSPAN VY ++ PHGR
Sbjct: 64 PGARYYGGNKFIDQIETLCQERALAAFNLDPAKWGVNVQCLSGSPANMQVYQAIMPPHGR 123
Query: 435 IMGLDLPDGGHLTHGFFTANKKISATSIFFESMPYKVDPTTGLIDYDKLAETAKLFKPRV 614
+MGLDLP GGHL+HG+ T KKISA S +FESMPY+VDP TGLIDYD L A+LF+P++
Sbjct: 124 LMGLDLPSGGHLSHGYQTDTKKISAVSTYFESMPYRVDPNTGLIDYDMLEHDAQLFRPKI 183
Query: 615 IIAGMSCYSR 644
++AG S Y R
Sbjct: 184 LVAGTSAYCR 193
>SPAC18G6.04c |shm2||serine hydroxymethyltransferase Shm2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 472
Score = 232 bits (568), Expect = 3e-62
Identities = 106/188 (56%), Positives = 134/188 (71%)
Frame = +3
Query: 81 KLLNGNLWETDPELFNLITKEKKRQQAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPY 260
KLL L E DP ++ ++ EK RQ+ + +IASENFTS V+ L S + NKYSEG P
Sbjct: 12 KLLKAPLAECDPTVYKILESEKSRQKESIALIASENFTSRAVMDALGSIMQNKYSEGYPG 71
Query: 261 QRYYGGNEFIDEIEILAQNRSLETYKLNPEEWGVNVQPYSGSPANFAVYTGVVEPHGRIM 440
RYYGGNEFID+ E L Q R+LE + L+ E+WGVNVQP+SGSPAN Y V++PH R+M
Sbjct: 72 ARYYGGNEFIDQAERLCQTRALEAFHLDGEKWGVNVQPHSGSPANLQAYQAVMKPHDRLM 131
Query: 441 GLDLPDGGHLTHGFFTANKKISATSIFFESMPYKVDPTTGLIDYDKLAETAKLFKPRVII 620
GLDLP GGHL+HGF T K ISA S +F +MPY V+ TG+IDYD L + A F+P+VI+
Sbjct: 132 GLDLPHGGHLSHGFSTPQKAISAVSTYFSTMPYNVNKETGIIDYDSLEKAAIQFRPKVIV 191
Query: 621 AGMSCYSR 644
AG S Y+R
Sbjct: 192 AGASAYAR 199
>SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 28.3 bits (60), Expect = 1.0
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = +3
Query: 144 KKRQQAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPYQRYYGGNEFIDEIEIL 308
+K Q+ L I S T L CLS CL Y + G E ++ +EIL
Sbjct: 189 EKLQKLSLLSIQSNRITQFENLACLSHCLRELYVSHNGLTS-FSGIEVLENLEIL 242
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 27.5 bits (58), Expect = 1.8
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Frame = +3
Query: 141 EKKRQQAGLEMIASENFTSVPVLQCLSSCLH-NKYSEGMPYQRYYG-GNEF-IDEIEILA 311
E K A I++ + +C+S + + ++ + Q Y G N+F I E+ +
Sbjct: 1739 ESKEIYASDSDISNSTSEDINKDECVSKDIEVDNFALNLQSQSYEGDSNDFGIREVPLSD 1798
Query: 312 QNRSLETYKLNPEEWGVNVQPYSGSPANFAVYTGVVE 422
N+S + + + +G PYS NF+ Y VE
Sbjct: 1799 ANQSSQADSTSIDRYG----PYSSQKVNFSKYKDFVE 1831
>SPAC821.12 |orb6||serine/threonine protein kinase
Orb6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 469
Score = 26.6 bits (56), Expect = 3.1
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 475 MDSLQQTRKYLLHLYSLRVCH 537
+D +Q+T+KY+ H Y + V H
Sbjct: 21 LDKVQKTKKYIEHYYKVAVDH 41
>SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1877
Score = 26.6 bits (56), Expect = 3.1
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 384 SPANFAVYTGVVEPHGRIMG-LDLPDGGHLTHGFFTANKKISATSIFFESMPYKVDPTTG 560
S A ++V T +++ R G + + D GH+ H F I+ I FES P+K+ TT
Sbjct: 1716 SMAAYSVITYLLQFKDRHNGNIMIDDQGHILHIDFGFIFDIAPGGITFESAPFKL--TTE 1773
Query: 561 LI 566
+I
Sbjct: 1774 MI 1775
>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +3
Query: 183 ENFTSVPVLQCLSSCLHNKYSEGMPYQRYYGGNEFIDEIEILAQNR 320
EN + + + ++CLH+ + + R Y G++ +D + +L R
Sbjct: 971 ENNSKSVIGENWTTCLHSSLVDNLGKYRKYDGSKILDILRVLRNKR 1016
>SPAC1F5.08c |yam8|ehs1|calcium transport
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 486
Score = 26.6 bits (56), Expect = 3.1
Identities = 16/70 (22%), Positives = 27/70 (38%)
Frame = +3
Query: 60 YTSTMNNKLLNGNLWETDPELFNLITKEKKRQQAGLEMIASENFTSVPVLQCLSSCLHNK 239
YTS + N +NGN+ + +NL + L + F L S +N
Sbjct: 27 YTSLLLNNTINGNINDQSTAYYNLTWEGNTAYNVSLTLSTCTAFDGANDLMLYIS--NNT 84
Query: 240 YSEGMPYQRY 269
+ E +P +
Sbjct: 85 FDEALPLDNF 94
>SPBC2F12.03c |||EST1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 891
Score = 25.8 bits (54), Expect = 5.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 361 TPHSSGFSLYVSSDLFCANISISSMNSFP 275
TPH S FS + + +N S+ S +SFP
Sbjct: 710 TPHRSPFSGQAFTGMGLSNYSLMSSSSFP 738
>SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit
Rev3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1480
Score = 25.8 bits (54), Expect = 5.4
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +3
Query: 525 ESMPYKVDPTTGLIDYDKLAETAKLFKPRVIIAGMSCYSRC 647
E++P ++P + L + + + P +IIA CYS C
Sbjct: 934 EALPLVMEPKSDLYNNPVVVLDFQSLYPSIIIAYNLCYSTC 974
>SPAC4D7.04c |||cis-prenyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 264
Score = 25.8 bits (54), Expect = 5.4
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -1
Query: 220 LKHCNTGTDVKFSDAIISSPACWRFFSFVIK 128
L C+ T++KF D + W+FF +I+
Sbjct: 226 LWQCHKNTEIKFIDFYWPDFSIWKFFPMLIQ 256
>SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 681
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +3
Query: 27 SEFSIPVRNFNYTSTMNNKLLNGNLWE 107
+E+S+PV + Y+ N +L N W+
Sbjct: 15 TEYSLPVFSSQYSDIENKDVLKSNSWD 41
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 25.4 bits (53), Expect = 7.1
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
Frame = -1
Query: 361 TPHSSGFSLYVSSDLFCANI----SISSMNSFP 275
+P S FS+ SSD+ ANI IS+ N+FP
Sbjct: 1292 SPESDCFSVATSSDIPKANIDFTNDISTQNTFP 1324
>SPAC20H4.10 |ufd2||ubiquitin-protein ligase E4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1010
Score = 25.4 bits (53), Expect = 7.1
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +3
Query: 87 LNGNLWETDPELFNLITKEKKRQQAGLEMIASENFTSVPVLQCLSSCLHNKYS 245
LN L ETD + L +K ++ G ++ +EN +L LS+ +N +S
Sbjct: 89 LNITLSETDSSKYYLEGFKKDLEEEGSPLLFNENNVDSALLSRLSTTGNNTFS 141
>SPAC3F10.17 |||ribosome biogenesis protein Ltv1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 386
Score = 25.4 bits (53), Expect = 7.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 348 EEWGVNVQPYSGSPANFAVY 407
EE+G ++P G AN+ +Y
Sbjct: 57 EEYGSTIRPNEGEAANYGIY 76
>SPAC18G6.11c |rrn3||ribosomal DNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 599
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = -2
Query: 423 VQQHPYKQQSLLATLNKVEHLLPILQ 346
+++ PYK +SLLA + + ++L I +
Sbjct: 199 LEEFPYKDESLLAQMTYISNVLSICE 224
>SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase
Ran1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 470
Score = 25.0 bits (52), Expect = 9.4
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -1
Query: 556 VVGSTLYGILSKNIDVADIFLFAVK 482
++G+ YG++ K D+ D L+AVK
Sbjct: 23 IIGAGAYGVVYKAEDIYDGTLYAVK 47
>SPAC16A10.01 |||DUF1212 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 830
Score = 25.0 bits (52), Expect = 9.4
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = -1
Query: 619 IITRGLKSL-AVSANLS*SISPVVGSTLYGILSKNIDVAD--IFLFAVKNPW 473
I+ G++ L AV +L S +GS LYG + K+ AD + + AV W
Sbjct: 615 IVAGGVRMLYAVIFSLFLSFGITIGSALYGWMDKDATDADTCMSIIAVSPYW 666
>SPAC890.04c |||ribosome biogenesis protein Ytm1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 25.0 bits (52), Expect = 9.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 463 PPSGKSNPIILPCGSTTPV*TAKFAGDP 380
P +G +P+IL G T PV F+ DP
Sbjct: 254 PQAGARSPLILCEGHTGPVMDIVFSDDP 281
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,869,291
Number of Sequences: 5004
Number of extensions: 64742
Number of successful extensions: 191
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -