Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_M09
(649 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1066 + 30098780-30098866,30099139-30099225,30099318-300994... 251 3e-67
11_04_0205 + 14860857-14861534,14862585-14862975,14863069-148631... 243 8e-65
12_02_0028 - 12437332-12437576,12438436-12438537,12438619-124390... 213 8e-56
05_04_0394 - 20906923-20907146,20907251-20907340,20908380-209087... 212 2e-55
01_06_1521 + 37956131-37957204,37958560-37958962,37959370-379594... 209 1e-54
12_01_0818 + 7524549-7524747,7524855-7525863,7525964-7526108,752... 42 3e-04
01_05_0572 + 23356737-23357705,23357811-23357957,23358048-23358443 33 0.26
03_01_0174 + 1410322-1410345,1410458-1410760,1411914-1412034,141... 29 2.4
11_06_0129 - 20397179-20397537,20397749-20400497 28 5.6
01_06_1668 + 38998348-38998434,38999234-38999300,38999377-389994... 28 5.6
03_04_0198 - 18381668-18381830,18381903-18382060,18382164-183821... 28 7.4
09_04_0518 - 18261420-18261953,18262054-18262626,18262736-182629... 27 9.7
>03_05_1066 +
30098780-30098866,30099139-30099225,30099318-30099439,
30099580-30099656,30100135-30100259,30100497-30100589,
30100840-30100932,30101016-30101213,30101337-30101441,
30101535-30101600,30101808-30101885,30102144-30102233,
30102325-30102448,30102590-30102741
Length = 498
Score = 251 bits (615), Expect = 3e-67
Identities = 115/188 (61%), Positives = 146/188 (77%)
Frame = +3
Query: 81 KLLNGNLWETDPELFNLITKEKKRQQAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPY 260
K LN L E DPE+ ++I EK RQ GLE+I SENFTSV V+Q + S + NKYSEG P
Sbjct: 32 KQLNAPLEEVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 91
Query: 261 QRYYGGNEFIDEIEILAQNRSLETYKLNPEEWGVNVQPYSGSPANFAVYTGVVEPHGRIM 440
RYYGGNE+ID E L Q R+LE ++L+P +WGVNVQP SGSPANF VYT +++PH RIM
Sbjct: 92 ARYYGGNEYIDMAESLCQKRALEAFRLDPAKWGVNVQPLSGSPANFHVYTALLKPHERIM 151
Query: 441 GLDLPDGGHLTHGFFTANKKISATSIFFESMPYKVDPTTGLIDYDKLAETAKLFKPRVII 620
LDLP GGHL+HG+ T KKISA SIFFE+MPY++D +TGLIDYD++ ++A LF+P++I+
Sbjct: 152 ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGLIDYDQMEKSAVLFRPKLIV 211
Query: 621 AGMSCYSR 644
AG S Y+R
Sbjct: 212 AGASAYAR 219
>11_04_0205 +
14860857-14861534,14862585-14862975,14863069-14863170,
14863438-14863682
Length = 471
Score = 243 bits (595), Expect = 8e-65
Identities = 112/179 (62%), Positives = 140/179 (78%), Gaps = 1/179 (0%)
Frame = +3
Query: 111 DPELFNLITKEKKRQQAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPYQRYYGGNEFI 290
DP + +L+ +EK+RQ++G+E+IASENFTS V++ L S L NKYSEGMP RYYGGN+ I
Sbjct: 16 DPLVHDLLEREKRRQRSGIELIASENFTSFAVMEALGSALTNKYSEGMPGARYYGGNDVI 75
Query: 291 DEIEILAQNRSLETYKLNPEEWGVNVQPYSGSPANFAVYTGVVEPHGRIMGLDLPDGGHL 470
DEIE L ++R+L ++L+ WGVNVQPYSGSPA FA YT ++ PH RIMGLDLP GGHL
Sbjct: 76 DEIENLCRDRALAAFRLDAASWGVNVQPYSGSPATFAAYTALLNPHDRIMGLDLPSGGHL 135
Query: 471 THGFFTA-NKKISATSIFFESMPYKVDPTTGLIDYDKLAETAKLFKPRVIIAGMSCYSR 644
THG++TA KKISATSI+FES+PYKV TG IDY+KL E A F+P++II G S Y R
Sbjct: 136 THGYYTAGGKKISATSIYFESLPYKVSAATGYIDYEKLEEKALDFRPKLIICGGSAYPR 194
>12_02_0028 -
12437332-12437576,12438436-12438537,12438619-12439009,
12439996-12440532
Length = 424
Score = 213 bits (521), Expect = 8e-56
Identities = 98/147 (66%), Positives = 116/147 (78%), Gaps = 1/147 (0%)
Frame = +3
Query: 207 LQCLSSCLHNKYSEGMPYQRYYGGNEFIDEIEILAQNRSLETYKLNPEEWGVNVQPYSGS 386
++ L S L NKYSEGMP RYYGGNE IDE+E L + R+L + L+PE WGVNVQPYSGS
Sbjct: 1 MEALGSPLTNKYSEGMPGSRYYGGNEVIDEVEELCRARALAAFHLDPEAWGVNVQPYSGS 60
Query: 387 PANFAVYTGVVEPHGRIMGLDLPDGGHLTHGFFTA-NKKISATSIFFESMPYKVDPTTGL 563
PANFA YTG+++PH RIMGLDLP GGHLTHG++TA KKISATSI+FES+PYKV TG
Sbjct: 61 PANFAAYTGLLQPHERIMGLDLPSGGHLTHGYYTAGGKKISATSIYFESLPYKVSSETGY 120
Query: 564 IDYDKLAETAKLFKPRVIIAGMSCYSR 644
+DYDKL E A F+P++II G S Y R
Sbjct: 121 VDYDKLEEKAMDFRPKLIICGGSAYPR 147
>05_04_0394 -
20906923-20907146,20907251-20907340,20908380-20908785,
20909264-20910247
Length = 567
Score = 212 bits (518), Expect = 2e-55
Identities = 99/183 (54%), Positives = 132/183 (72%), Gaps = 1/183 (0%)
Frame = +3
Query: 99 LWETDPELFNLITKEKKRQQAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPYQRYYGG 278
L E DP++ L+ +E++RQ G+E+IASEN+ VL L S L NKYSEG+P RYY G
Sbjct: 114 LTEADPDVHELMERERRRQAGGVELIASENYACRAVLDALGSHLTNKYSEGLPGARYYCG 173
Query: 279 NEFIDEIEILAQNRSLETYKLNPEEWGVNVQPYSGSPANFAVYTGVVEPHGRIMGLDLPD 458
N+ ID IE L +R+L + L+P WGVNVQPYS + ANFAVYTG++ P+ RIMGLD P
Sbjct: 174 NQHIDAIERLCCDRALAAFGLDPSRWGVNVQPYSCTSANFAVYTGLLLPNDRIMGLDSPS 233
Query: 459 GGHLTHGFFT-ANKKISATSIFFESMPYKVDPTTGLIDYDKLAETAKLFKPRVIIAGMSC 635
GGH++HG++T + KK+S SIFFE++ Y+V+P TG IDYDK+ E A F P+++I G S
Sbjct: 234 GGHVSHGYYTPSGKKVSGASIFFENLSYRVNPHTGYIDYDKVEEKAVDFHPKILICGASS 293
Query: 636 YSR 644
Y R
Sbjct: 294 YPR 296
>01_06_1521 +
37956131-37957204,37958560-37958962,37959370-37959471,
37959569-37959792
Length = 600
Score = 209 bits (511), Expect = 1e-54
Identities = 103/186 (55%), Positives = 129/186 (69%), Gaps = 1/186 (0%)
Frame = +3
Query: 90 NGNLWETDPELFNLITKEKKRQQAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPYQRY 269
N L E DP++ L+ E+ RQ G+E+IASENF VL+ L S L NKYSEG P RY
Sbjct: 141 NQALAEADPDVHALMELERDRQVRGIELIASENFVCRAVLEALGSHLTNKYSEGHPGARY 200
Query: 270 YGGNEFIDEIEILAQNRSLETYKLNPEEWGVNVQPYSGSPANFAVYTGVVEPHGRIMGLD 449
YGGN+ ID IE L R+L + L+P WGVNVQPYS + AN AVYTG++ P RIMGL+
Sbjct: 201 YGGNQHIDGIERLCHERALAAFGLDPACWGVNVQPYSCTSANLAVYTGLLLPKDRIMGLE 260
Query: 450 LPDGGHLTHGFFT-ANKKISATSIFFESMPYKVDPTTGLIDYDKLAETAKLFKPRVIIAG 626
P GGH++HG++T + KK+S SIFFES+ YKV+P TG IDYDKL E A F P+++I G
Sbjct: 261 PPSGGHVSHGYYTPSGKKVSGASIFFESLSYKVNPQTGYIDYDKLEERAMDFHPKILICG 320
Query: 627 MSCYSR 644
S Y R
Sbjct: 321 GSSYPR 326
>12_01_0818 + 7524549-7524747,7524855-7525863,7525964-7526108,
7526206-7526295,7526404-7526553,7527333-7528094,
7528177-7528496,7528581-7528707,7528792-7528959,
7529054-7530466,7530563-7530823,7530983-7531144,
7531976-7532121,7532601-7532667,7533483-7533587
Length = 1707
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +3
Query: 441 GLDLPDGGHLTHGFFTANKKISATSIFFE-SMPYKVDPTTG 560
GL+LP GGH++ + T + K+S+ S+F E M Y V+P TG
Sbjct: 1611 GLELPSGGHVSCRYCTPSGKLSSASVFIEMEMSYMVNPQTG 1651
>01_05_0572 + 23356737-23357705,23357811-23357957,23358048-23358443
Length = 503
Score = 32.7 bits (71), Expect = 0.26
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = +1
Query: 256 HIKGTMAEMNSLMK*KYWHKIGHWKHTS*ILKNGE*MFNLIQGRQQTLLFIRVLLNRMVE 435
HIK + E N + K+W ++GH + +K + +F+ +G L FI+ +L R +
Sbjct: 370 HIKYNVDESNGELNSKFWQEVGHIECVESSIK--KVVFDQFRGGANELEFIKFILER-AQ 426
Query: 436 LWD*IYLMVD 465
+ D + +VD
Sbjct: 427 MLDKMVFVVD 436
>03_01_0174 +
1410322-1410345,1410458-1410760,1411914-1412034,
1412147-1412321,1412417-1412487,1412586-1413268
Length = 458
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = +3
Query: 102 WETDPELFNLITKEKKRQQAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPYQRYYGGN 281
W T P FNL + G E++AS+N P++ L S + G Y + G+
Sbjct: 84 WLTGP--FNLTSHFTLFLDHGAEILASQNLEDWPLIAPLPSYGRGRDEPGPRYSNFIAGS 141
Query: 282 EFIDEI 299
D I
Sbjct: 142 NLTDVI 147
>11_06_0129 - 20397179-20397537,20397749-20400497
Length = 1035
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 69 TMNNKLLNGNLWETDPELFNLITKEKKRQQAGLEM-IASENFTSVPVL 209
T+ N +LNGN+ E +L +L T + R E+ I ENFT + L
Sbjct: 569 TLQNNMLNGNIPEQLSQLKSLQTLDFSRNNLSGEIPIFIENFTMLSYL 616
>01_06_1668 +
38998348-38998434,38999234-38999300,38999377-38999435,
38999636-38999711,38999856-38999930,39000007-39000094,
39000261-39000486,39000689-39000804,39001172-39001383,
39001882-39001916,39002005-39002107,39002645-39002753,
39002838-39003036
Length = 483
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 4/95 (4%)
Frame = +3
Query: 258 YQRYYGGNEFIDEIEILAQNRSLETYKLNPEEWGVNVQP----YSGSPANFAVYTGVVEP 425
Y RY E + + A S+ ++ P+ G NV + NF + G+ EP
Sbjct: 67 YHRYKEDIELMASLGFRAYRFSISWPRIFPDGLGKNVNEQGVAFYNDLINFMIEKGI-EP 125
Query: 426 HGRIMGLDLPDGGHLTHGFFTANKKISATSIFFES 530
+ + DLP T G + ++K + +++ E+
Sbjct: 126 YATLYHWDLPHNLQQTVGGWLSDKIVEYFALYAEA 160
>03_04_0198 -
18381668-18381830,18381903-18382060,18382164-18382199,
18382344-18382439,18382632-18382709,18382921-18383073,
18383261-18383365
Length = 262
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 252 MPYQR--YYGGNEFIDEIEILAQNRSLETYKLNP 347
+PY+ +Y G ++ E+LA++R L +YK+ P
Sbjct: 126 VPYEETGWYDGQMWVKPPEVLARDRLLGSYKVKP 159
>09_04_0518 -
18261420-18261953,18262054-18262626,18262736-18262948,
18263379-18263510,18263591-18263731,18263899-18264120
Length = 604
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +3
Query: 276 GNEFIDEIEILAQNRSLETYKLNPEEWGVNVQPYSGSPANFAVYTGV 416
G+E IDEIE A++ + TY+L +WG + G P V TG+
Sbjct: 283 GHENIDEIEEKAKSLATCTYELR-TQWGNEIGVKYGCPVE-DVITGL 327
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,353,269
Number of Sequences: 37544
Number of extensions: 368579
Number of successful extensions: 780
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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