Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_M09
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00048-13|AAB53830.1| 484|Caenorhabditis elegans Maternal effec... 280 7e-76
U00048-12|AAL27228.1| 507|Caenorhabditis elegans Maternal effec... 280 7e-76
AF067612-5|AAM98011.3| 195|Caenorhabditis elegans Egg laying de... 31 0.70
U64842-2|AAB37084.1| 462|Caenorhabditis elegans Hypothetical pr... 30 1.2
U12787-1|AAA92672.1| 458|Caenorhabditis elegans HMG CoA synthas... 30 1.2
U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w... 30 1.2
U80030-3|AAG24160.2| 367|Caenorhabditis elegans Serpentine rece... 28 5.0
AF039049-2|AAB94252.2| 297|Caenorhabditis elegans Serpentine re... 28 6.6
Z31590-8|CAA83465.1| 812|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF518559-1|AAM97343.1| 793|Caenorhabditis elegans inositol poly... 27 8.7
>U00048-13|AAB53830.1| 484|Caenorhabditis elegans Maternal effect
lethal protein32, isoform a protein.
Length = 484
Score = 280 bits (686), Expect = 7e-76
Identities = 128/200 (64%), Positives = 160/200 (80%)
Frame = +3
Query: 45 VRNFNYTSTMNNKLLNGNLWETDPELFNLITKEKKRQQAGLEMIASENFTSVPVLQCLSS 224
V+ YT+ N +L ++ + DPE+F+++ EKKRQ+ GLE+IASENFTS V+ L S
Sbjct: 13 VQRHKYTN--NENILVDHVEKVDPEVFDIMKNEKKRQRRGLELIASENFTSKAVMDALGS 70
Query: 225 CLHNKYSEGMPYQRYYGGNEFIDEIEILAQNRSLETYKLNPEEWGVNVQPYSGSPANFAV 404
+ NKYSEG P RYYGGNEFID++E+L Q R+LE + L+P +WGVNVQP SGSPANFAV
Sbjct: 71 AMCNKYSEGYPGARYYGGNEFIDQMELLCQKRALEVFGLDPAKWGVNVQPLSGSPANFAV 130
Query: 405 YTGVVEPHGRIMGLDLPDGGHLTHGFFTANKKISATSIFFESMPYKVDPTTGLIDYDKLA 584
YT +V +GRIMGLDLPDGGHLTHGFFT +K+SATS FF+S+PYKVDPTTGLIDYDKL
Sbjct: 131 YTAIVGSNGRIMGLDLPDGGHLTHGFFTPARKVSATSEFFQSLPYKVDPTTGLIDYDKLE 190
Query: 585 ETAKLFKPRVIIAGMSCYSR 644
+ A LF+P+ IIAG+SCY+R
Sbjct: 191 QNAMLFRPKAIIAGVSCYAR 210
>U00048-12|AAL27228.1| 507|Caenorhabditis elegans Maternal effect
lethal protein32, isoform b protein.
Length = 507
Score = 280 bits (686), Expect = 7e-76
Identities = 128/200 (64%), Positives = 160/200 (80%)
Frame = +3
Query: 45 VRNFNYTSTMNNKLLNGNLWETDPELFNLITKEKKRQQAGLEMIASENFTSVPVLQCLSS 224
V+ YT+ N +L ++ + DPE+F+++ EKKRQ+ GLE+IASENFTS V+ L S
Sbjct: 36 VQRHKYTN--NENILVDHVEKVDPEVFDIMKNEKKRQRRGLELIASENFTSKAVMDALGS 93
Query: 225 CLHNKYSEGMPYQRYYGGNEFIDEIEILAQNRSLETYKLNPEEWGVNVQPYSGSPANFAV 404
+ NKYSEG P RYYGGNEFID++E+L Q R+LE + L+P +WGVNVQP SGSPANFAV
Sbjct: 94 AMCNKYSEGYPGARYYGGNEFIDQMELLCQKRALEVFGLDPAKWGVNVQPLSGSPANFAV 153
Query: 405 YTGVVEPHGRIMGLDLPDGGHLTHGFFTANKKISATSIFFESMPYKVDPTTGLIDYDKLA 584
YT +V +GRIMGLDLPDGGHLTHGFFT +K+SATS FF+S+PYKVDPTTGLIDYDKL
Sbjct: 154 YTAIVGSNGRIMGLDLPDGGHLTHGFFTPARKVSATSEFFQSLPYKVDPTTGLIDYDKLE 213
Query: 585 ETAKLFKPRVIIAGMSCYSR 644
+ A LF+P+ IIAG+SCY+R
Sbjct: 214 QNAMLFRPKAIIAGVSCYAR 233
>AF067612-5|AAM98011.3| 195|Caenorhabditis elegans Egg laying
defective protein 4,isoform d protein.
Length = 195
Score = 31.1 bits (67), Expect = 0.70
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = +3
Query: 84 LLNGNLWETDPELFNLITKEKKRQQAGLEMIAS-ENF-TSVPVLQCLSSCLHNKYSEGMP 257
L + LW D +F +IT Q+ G+E + NF T V + Q LS +K ++ M
Sbjct: 94 LTDVQLWVLDRSVFQMIT-----QRLGMERHSQLMNFLTKVSIFQNLSEDRISKMADVMD 148
Query: 258 YQRYYGGNEFIDEIEILAQNRSLETYKLNPEEWGVNVQPYSGSPANF 398
Y GG+ I + E ++ + + P + V +SG F
Sbjct: 149 QDYYDGGHYIIRQGEKVSNPADVTNFDNYPPDNDVPPDEFSGWDEGF 195
>U64842-2|AAB37084.1| 462|Caenorhabditis elegans Hypothetical
protein F25B4.6 protein.
Length = 462
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +3
Query: 165 LEMIASENFTSVPVLQCLSSCLHNKYSEGMPYQR--YYGGNEFIDEIEILAQNRSLETYK 338
+E+ +NF L+ ++ KY+ G+ Q+ + NE I I + + +ETYK
Sbjct: 19 IELYFPQNFVDQNDLEKFNNVSSGKYTIGLGQQQMGFCSDNEDIVSISLTVTRKLIETYK 78
Query: 339 LNPEEWG 359
++ + G
Sbjct: 79 ISTDSIG 85
>U12787-1|AAA92672.1| 458|Caenorhabditis elegans HMG CoA synthase
protein.
Length = 458
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +3
Query: 165 LEMIASENFTSVPVLQCLSSCLHNKYSEGMPYQR--YYGGNEFIDEIEILAQNRSLETYK 338
+E+ +NF L+ ++ KY+ G+ Q+ + NE I I + + +ETYK
Sbjct: 15 IELYFPQNFVDQNDLEKFNNVSSGKYTIGLGQQQMGFCSDNEDIVSISLTVTRKLIETYK 74
Query: 339 LNPEEWG 359
++ + G
Sbjct: 75 ISTDSIG 81
>U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w)
trna synthetaseprotein 2, isoform a protein.
Length = 650
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +3
Query: 126 NLITKEKKRQQAGLEMIASENFTSVPVLQCLSSCLHNK 239
N + KEKK G + EN P QC S CL NK
Sbjct: 226 NKLKKEKKENNGGSDRNLDENSLFHPTFQC-SICLENK 262
>U80030-3|AAG24160.2| 367|Caenorhabditis elegans Serpentine
receptor, class w protein115 protein.
Length = 367
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 314 LCQYFYFINEFISAIVPLI 258
L +YFY N F+S IVP I
Sbjct: 215 LAKYFYLFNSFVSDIVPCI 233
>AF039049-2|AAB94252.2| 297|Caenorhabditis elegans Serpentine
receptor, class x protein67 protein.
Length = 297
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 11/63 (17%)
Frame = -3
Query: 338 LVCFQ*PILCQYFYFINEFISAIVPL---IWHTL--------*VFIVKT*TQAL*YRN*C 192
L C++ +L + IN F + +VPL IW T+ ++IV+T A+ Y+ C
Sbjct: 84 LFCYESSVLTHFCISINRFCAVLVPLKYDIWFTIKNTKKIIALLWIVETIIAAIFYQYLC 143
Query: 191 KVF 183
VF
Sbjct: 144 NVF 146
>Z31590-8|CAA83465.1| 812|Caenorhabditis elegans Hypothetical
protein R01H10.7 protein.
Length = 812
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3
Query: 18 KTYSEFSIPVRNFNYTSTMNNKLLNGNLWETDPELFNLITKEKKRQQAG 164
K YS+ +P NF+YT + L +L +T EL + I KE K + G
Sbjct: 334 KLYSQLDVPSYNFDYTFWKKRQALL-DLKKTIGELSHKIEKEWKIAKFG 381
>AF518559-1|AAM97343.1| 793|Caenorhabditis elegans inositol
polyphosphate-4-phosphataseprotein.
Length = 793
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3
Query: 18 KTYSEFSIPVRNFNYTSTMNNKLLNGNLWETDPELFNLITKEKKRQQAG 164
K YS+ +P NF+YT + L +L +T EL + I KE K + G
Sbjct: 315 KLYSQLDVPSYNFDYTFWKKRQALL-DLKKTIGELSHKIEKEWKIAKFG 362
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,475,309
Number of Sequences: 27780
Number of extensions: 346659
Number of successful extensions: 768
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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