Samia BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_M08
         (594 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC1815.01 |eno101|eno1|enolase|Schizosaccharomyces pombe|chr 2...   169   3e-43
SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase |Schizosa...   166   2e-42
SPCC1450.11c |cek1||serine/threonine protein kinase Cek1|Schizos...    29   0.68 
SPBC18H10.18c |||sequence orphan|Schizosaccharomyces pombe|chr 2...    27   1.6  
SPCC1682.06 |||sequence orphan|Schizosaccharomyces pombe|chr 3||...    27   1.6  
SPCC61.03 |||conserved protein|Schizosaccharomyces pombe|chr 3||...    27   2.7  
SPCC14G10.01 ||SPCC18B5.12|dephospho-CoA kinase |Schizosaccharom...    26   4.8  

>SPBC1815.01 |eno101|eno1|enolase|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 439

 Score =  169 bits (411), Expect = 3e-43
 Identities = 83/181 (45%), Positives = 119/181 (65%), Gaps = 1/181 (0%)
 Frame = +1

Query: 55  MPIKIILARQIFDATGVPTTEVDMVTELGLFRIGVPSTDRKKLAEAVQLRDNNPKEYHGM 234
           M I+ + ARQI+D+ G PT EVD+ TE G+ R  VPS     + EA+++RD +  ++ G 
Sbjct: 1   MAIQKVFARQIYDSRGNPTVEVDLTTETGIHRAIVPSGASTGIWEALEMRDGDKTKWGGK 60

Query: 235 GVSSAVKNINTIIAPELIKQNLEVTMQKEIDQFMISLDGTENRSRLGANAIMCVSLVVXX 414
           GV  AV N+N IIAP ++K NL+VT QK  D+F++ LDGTEN+S+LGANAI+ VS+ +  
Sbjct: 61  GVLKAVGNVNNIIAPAVVKANLDVTDQKAADEFLLKLDGTENKSKLGANAILGVSMAICR 120

Query: 415 XXXXXXXIPLYRHISDMAGVT-TIILPVPHFTILTGGILASNGLPFQEYTIMPIGASSFA 591
                  +PL+++I++  G     +LPVP F +L GG  A   L FQE+ I+P GA SF+
Sbjct: 121 AGAAQKKLPLWKYIAENFGTKGPYVLPVPSFNVLNGGSHAGGDLAFQEFMILPTGAPSFS 180

Query: 592 E 594
           E
Sbjct: 181 E 181


>SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 440

 Score =  166 bits (403), Expect = 2e-42
 Identities = 85/179 (47%), Positives = 117/179 (65%), Gaps = 1/179 (0%)
 Frame = +1

Query: 61  IKIILARQIFDATGVPTTEVDMVTELGLFRIGVPSTDRKKLAEAVQLRDNNPKEYHGMGV 240
           I+ I +R I+D+ G PT EV++ TELG FR  VPS       EA +LRDN+  ++ G GV
Sbjct: 4   IQKIYSRSIYDSRGNPTVEVELTTELGTFRSMVPSGASTGEWEAKELRDNDKNKWGGKGV 63

Query: 241 SSAVKNINTIIAPELIKQNLEVTMQKEIDQFMISLDGTENRSRLGANAIMCVSLVVXXXX 420
           + AV N+N II P L+K ++++T Q+ ID+FMI LDGT ++S+LGAN+I+ VS+ V    
Sbjct: 64  TIAVHNVNNIIGPALVKSDIKITDQRGIDEFMIKLDGTNDKSKLGANSIVGVSMAVARAA 123

Query: 421 XXXXXIPLYRHISDMAG-VTTIILPVPHFTILTGGILASNGLPFQEYTIMPIGASSFAE 594
                IPLY +I  +AG  TT  +PVP F +L GG  A   L FQE+ IMPI A +F+E
Sbjct: 124 AAFLKIPLYEYIGKLAGSKTTECIPVPSFNVLNGGRHAGGDLAFQEFMIMPIKAPTFSE 182


>SPCC1450.11c |cek1||serine/threonine protein kinase
           Cek1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1338

 Score = 28.7 bits (61), Expect = 0.68
 Identities = 19/83 (22%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
 Frame = +1

Query: 127 VTELGLFRIGVPSTDRKKLAEAVQLRDNNPKEYHGMGVSSAVKNINTIIAPELIKQNLEV 306
           +T+ GL R+G     R+K + ++ + D   +       SSA+ +++   A  +++    +
Sbjct: 729 LTDFGLSRVGYMKRHRRKQSSSIPVLDLRDR-------SSAISDLSLSTASSVLEAQSLI 781

Query: 307 TMQK----EIDQFMISLDGTENR 363
           T ++     +++ ++SLDGT  R
Sbjct: 782 TPERPKRPSLNEKLLSLDGTSIR 804


>SPBC18H10.18c |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 242

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 5   FFFFLIIYQNYDNYYTKCLLRLF*LVKYLM 94
           F   L++Y N+ NY+ + L  L  +VKY++
Sbjct: 84  FILTLLLYHNFYNYFDQALADLNSVVKYVI 113


>SPCC1682.06 |||sequence orphan|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 238

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 5   FFFFLIIYQNYDNYYTKCLLRLF*LVKYLM 94
           F   L++Y N+ NY+ + L  L  +VKY++
Sbjct: 84  FILTLLLYHNFYNYFDQALADLNSVVKYVI 113


>SPCC61.03 |||conserved protein|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 327

 Score = 26.6 bits (56), Expect = 2.7
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 556 ILETVIRWKREYLQLEW*NEG 494
           IL T + W+  YL  EW  EG
Sbjct: 243 ILATFLAWRHAYLSKEWDTEG 263


>SPCC14G10.01 ||SPCC18B5.12|dephospho-CoA kinase
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 236

 Score = 25.8 bits (54), Expect = 4.8
 Identities = 12/38 (31%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = +1

Query: 268 IIAPELIKQNLE--VTMQKEIDQFMISLDGTENRSRLG 375
           ++A ++++ N    + +QKE    ++  DGT NR++LG
Sbjct: 34  VLARKVVEPNTPCLIKIQKEFGNEVLHEDGTLNRAKLG 71


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,327,062
Number of Sequences: 5004
Number of extensions: 44423
Number of successful extensions: 111
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 109
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 258201856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)