Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_M08
         (594 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68318-8|CAH10783.1|  465|Caenorhabditis elegans Hypothetical pr...   185   2e-47
Z68318-2|CAA92692.1|  434|Caenorhabditis elegans Hypothetical pr...   184   4e-47
Z68318-3|CAD57704.1|  337|Caenorhabditis elegans Hypothetical pr...   139   2e-33
AL132860-8|CAB60523.3|  278|Caenorhabditis elegans Hypothetical ...    28   4.4  
U50308-6|AAG24025.2|  936|Caenorhabditis elegans Dispatched fami...    28   5.8  

>Z68318-8|CAH10783.1|  465|Caenorhabditis elegans Hypothetical
           protein T21B10.2c protein.
          Length = 465

 Score =  185 bits (450), Expect = 2e-47
 Identities = 91/181 (50%), Positives = 122/181 (67%)
 Frame = +1

Query: 52  KMPIKIILARQIFDATGVPTTEVDMVTELGLFRIGVPSTDRKKLAEAVQLRDNNPKEYHG 231
           +MPI  I ARQI+D+ G PT EVD+ TE G+FR  VPS     + EA++LRD +   + G
Sbjct: 31  RMPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRDGDKAVHLG 90

Query: 232 MGVSSAVKNINTIIAPELIKQNLEVTMQKEIDQFMISLDGTENRSRLGANAIMCVSLVVX 411
            GV  AV NIN  IAP LI +  +VT QK+ID FM++LDG+EN+  LGANAI+ VSL V 
Sbjct: 91  KGVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGANAILGVSLAVA 150

Query: 412 XXXXXXXXIPLYRHISDMAGVTTIILPVPHFTILTGGILASNGLPFQEYTIMPIGASSFA 591
                   +PLY++I+++AG   ++LPVP F ++ GG  A N L  QE+ I+P+GASSFA
Sbjct: 151 KAGAVHKGLPLYKYIAELAGTGKVVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFA 210

Query: 592 E 594
           E
Sbjct: 211 E 211


>Z68318-2|CAA92692.1|  434|Caenorhabditis elegans Hypothetical
           protein T21B10.2a protein.
          Length = 434

 Score =  184 bits (448), Expect = 4e-47
 Identities = 91/180 (50%), Positives = 121/180 (67%)
 Frame = +1

Query: 55  MPIKIILARQIFDATGVPTTEVDMVTELGLFRIGVPSTDRKKLAEAVQLRDNNPKEYHGM 234
           MPI  I ARQI+D+ G PT EVD+ TE G+FR  VPS     + EA++LRD +   + G 
Sbjct: 1   MPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRDGDKAVHLGK 60

Query: 235 GVSSAVKNINTIIAPELIKQNLEVTMQKEIDQFMISLDGTENRSRLGANAIMCVSLVVXX 414
           GV  AV NIN  IAP LI +  +VT QK+ID FM++LDG+EN+  LGANAI+ VSL V  
Sbjct: 61  GVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGANAILGVSLAVAK 120

Query: 415 XXXXXXXIPLYRHISDMAGVTTIILPVPHFTILTGGILASNGLPFQEYTIMPIGASSFAE 594
                  +PLY++I+++AG   ++LPVP F ++ GG  A N L  QE+ I+P+GASSFAE
Sbjct: 121 AGAVHKGLPLYKYIAELAGTGKVVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFAE 180


>Z68318-3|CAD57704.1|  337|Caenorhabditis elegans Hypothetical
           protein T21B10.2b protein.
          Length = 337

 Score =  139 bits (336), Expect = 2e-33
 Identities = 71/143 (49%), Positives = 94/143 (65%)
 Frame = +1

Query: 55  MPIKIILARQIFDATGVPTTEVDMVTELGLFRIGVPSTDRKKLAEAVQLRDNNPKEYHGM 234
           MPI  I ARQI+D+ G PT EVD+ TE G+FR  VPS     + EA++LRD +   + G 
Sbjct: 1   MPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRDGDKAVHLGK 60

Query: 235 GVSSAVKNINTIIAPELIKQNLEVTMQKEIDQFMISLDGTENRSRLGANAIMCVSLVVXX 414
           GV  AV NIN  IAP LI +  +VT QK+ID FM++LDG+EN+  LGANAI+ VSL V  
Sbjct: 61  GVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGANAILGVSLAVAK 120

Query: 415 XXXXXXXIPLYRHISDMAGVTTI 483
                  +PLY++I+++AG   I
Sbjct: 121 AGAVHKGLPLYKYIAELAGTGKI 143


>AL132860-8|CAB60523.3|  278|Caenorhabditis elegans Hypothetical
           protein Y56A3A.11 protein.
          Length = 278

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 17/48 (35%), Positives = 29/48 (60%)
 Frame = -1

Query: 282 FGCDYCIYILHGAGYAHAVILFGVVVS*LYCFRKLFSVCRRNADTKQS 139
           FGCDY IY L GA + H+    GV+++ +   R+L ++ R  +  K++
Sbjct: 182 FGCDYLIYCL-GAEFYHSSA--GVLIADVIDPRRLLTLTRILSHNKKA 226


>U50308-6|AAG24025.2|  936|Caenorhabditis elegans Dispatched family
           protein 2 protein.
          Length = 936

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +2

Query: 437 FHFIGIFLIWLGLQQLFYRSLISPF*LEVFS 529
           F+ IG  L+ LG+  LF  S++ P  L VFS
Sbjct: 896 FYQIGTMLVILGITSLFGASIVLPSFLMVFS 926


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,816,193
Number of Sequences: 27780
Number of extensions: 249505
Number of successful extensions: 659
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)