Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_L16
         (360 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015A6520 Cluster: Vacuolar protein sorting-associa...    32   3.5  
UniRef50_Q4Q9Z9 Cluster: Putative uncharacterized protein; n=3; ...    31   4.6  
UniRef50_Q4RHQ7 Cluster: Chromosome 19 SCAF15045, whole genome s...    31   6.1  
UniRef50_A6L405 Cluster: Cytochrome c biogenesis protein; n=1; B...    31   8.0  

>UniRef50_UPI00015A6520 Cluster: Vacuolar protein sorting-associated
           protein 13B (Cohen syndrome protein 1).; n=1; Danio
           rerio|Rep: Vacuolar protein sorting-associated protein
           13B (Cohen syndrome protein 1). - Danio rerio
          Length = 1240

 Score = 31.9 bits (69), Expect = 3.5
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = -3

Query: 322 KCMCDVCVCVLFTHIYYLHCRSLVERRSDVTNVLAHVLIKCL 197
           +C+C VCVCV    ++   C  +V+ RSD     A  L  CL
Sbjct: 340 RCVC-VCVCVRERDLHRCVCVRVVQSRSDTLTTAATSLSDCL 380


>UniRef50_Q4Q9Z9 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 494

 Score = 31.5 bits (68), Expect = 4.6
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
 Frame = -3

Query: 337 AWCDNKCMCDVCVCVLFTHIYYLHCRSLVERRSDVTNVLAHVLIKCLQ*YLEGDV*RHKC 158
           A C   C+C VC+CV +  + + H  S   R S   +++  ++  CL   L   +  HK 
Sbjct: 3   ALCVCVCVC-VCMCVCWNEVVWPHLNSRRGRASGEAHLVNELVASCLA-PLFSPLPAHKM 60

Query: 157 NKQYIQ---VGRRRAKVIPNLLVDIH 89
           +   +Q        A+ +P L+  +H
Sbjct: 61  SSAAVQAPATAEASAESVPLLITCLH 86


>UniRef50_Q4RHQ7 Cluster: Chromosome 19 SCAF15045, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 19
           SCAF15045, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 838

 Score = 31.1 bits (67), Expect = 6.1
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +3

Query: 147 YCLLHL*RHTSPSKYYCKHLISTCASTFVTSLRLSTRER 263
           Y   H+  HTS   Y CKH    C+  F T+ +LS  ER
Sbjct: 634 YFKRHMECHTSQMSYPCKH----CSKCFPTAFKLSNHER 668


>UniRef50_A6L405 Cluster: Cytochrome c biogenesis protein; n=1;
           Bacteroides vulgatus ATCC 8482|Rep: Cytochrome c
           biogenesis protein - Bacteroides vulgatus (strain ATCC
           8482 / DSM 1447 / NCTC 11154)
          Length = 750

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -3

Query: 325 NKCMCDVCVCV-LFTHIYYLHCRSLVERRSDVTNVLAHVLIKCLQ*YLEGDV 173
           +K +   C+C+ L   IYY HC +  +R S    ++ ++L+  +  YL   +
Sbjct: 483 SKSVAMACICIGLICFIYYCHCMASQKRTSRKAIIILNILLWIVFTYLSAAI 534


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 321,671,138
Number of Sequences: 1657284
Number of extensions: 5591578
Number of successful extensions: 9475
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9470
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12367962079
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)