Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_L15
         (281 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK097637-1|BAC05127.1|  177|Homo sapiens protein ( Homo sapiens ...    28   4.8  
AB012043-1|BAA36409.1| 1555|Homo sapiens NBR13 protein.                28   6.3  
AL138762-3|CAH70950.1| 1173|Homo sapiens chromosome 10 open read...    27   8.4  
AL138762-2|CAH70949.1| 1186|Homo sapiens chromosome 10 open read...    27   8.4  
AL133215-19|CAI10933.1| 1173|Homo sapiens chromosome 10 open rea...    27   8.4  
AL133215-18|CAI10932.1| 1186|Homo sapiens chromosome 10 open rea...    27   8.4  
AK001374-1|BAA91657.1|  498|Homo sapiens protein ( Homo sapiens ...    27   8.4  
AF460991-1|AAN84475.1| 1173|Homo sapiens C10ORF6 protein.              27   8.4  

>AK097637-1|BAC05127.1|  177|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40318 fis, clone TESTI2030556. ).
          Length = 177

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +2

Query: 35  LSCFSSSPYWPWLPQTEF 88
           L+CF   P+WP++PQT F
Sbjct: 72  LACFLQ-PWWPFIPQTRF 88


>AB012043-1|BAA36409.1| 1555|Homo sapiens NBR13 protein.
          Length = 1555

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 103  SDHVVIANPDPFFSQPSNGPSGKL 174
            S+H  +A P P  S P +GP G L
Sbjct: 1519 SNHQHVAKPSPSHSAPKSGPMGSL 1542


>AL138762-3|CAH70950.1| 1173|Homo sapiens chromosome 10 open reading
           frame 6 protein.
          Length = 1173

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 44  FSSSPYWPWLP 76
           FS SP WPW+P
Sbjct: 840 FSDSPVWPWIP 850


>AL138762-2|CAH70949.1| 1186|Homo sapiens chromosome 10 open reading
           frame 6 protein.
          Length = 1186

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 44  FSSSPYWPWLP 76
           FS SP WPW+P
Sbjct: 840 FSDSPVWPWIP 850


>AL133215-19|CAI10933.1| 1173|Homo sapiens chromosome 10 open
           reading frame 6 protein.
          Length = 1173

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 44  FSSSPYWPWLP 76
           FS SP WPW+P
Sbjct: 840 FSDSPVWPWIP 850


>AL133215-18|CAI10932.1| 1186|Homo sapiens chromosome 10 open
           reading frame 6 protein.
          Length = 1186

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 44  FSSSPYWPWLP 76
           FS SP WPW+P
Sbjct: 840 FSDSPVWPWIP 850


>AK001374-1|BAA91657.1|  498|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10512 fis, clone NT2RP2000658. ).
          Length = 498

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 44  FSSSPYWPWLP 76
           FS SP WPW+P
Sbjct: 165 FSDSPVWPWIP 175


>AF460991-1|AAN84475.1| 1173|Homo sapiens C10ORF6 protein.
          Length = 1173

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 44  FSSSPYWPWLP 76
           FS SP WPW+P
Sbjct: 840 FSDSPVWPWIP 850


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,053,051
Number of Sequences: 237096
Number of extensions: 821824
Number of successful extensions: 1590
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1590
length of database: 76,859,062
effective HSP length: 70
effective length of database: 60,262,342
effective search space used: 1386033866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)