Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_L15
         (281 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   1.7  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   3.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    19   8.8  

>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.8 bits (44), Expect = 1.7
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -1

Query: 263 TTGERVVVSPWVDNWD 216
           TTG+R VV+P V ++D
Sbjct: 179 TTGKRNVVTPIVQSFD 194


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +2

Query: 239 IRLPSRPWWE 268
           I +  RPWWE
Sbjct: 69  IVIDKRPWWE 78


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -2

Query: 196 RSSAYGFIISR*DRLMVERRKDP 128
           +SS YGF   R D       KDP
Sbjct: 287 KSSDYGFTECRCDPGYFRAEKDP 309


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,037
Number of Sequences: 438
Number of extensions: 1648
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5494764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)