Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_L14
         (659 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0319 - 4291144-4293402                                           31   0.81 
01_04_0143 + 16689471-16689498,16689687-16689818,16689974-166900...    29   3.3  
10_07_0196 + 13978647-13979142,13979242-13980542                       29   4.3  
02_01_0325 - 2208480-2208674,2208772-2210609,2210980-2211109,221...    29   4.3  
11_01_0593 - 4705565-4705822,4705916-4706065,4706160-4706307,470...    28   5.7  
03_02_0143 - 5888005-5888088,5888818-5888949,5889485-5889634,589...    28   7.6  
02_05_1264 + 35321972-35322448,35323022-35323252,35323903-353245...    28   7.6  

>04_01_0319 - 4291144-4293402
          Length = 752

 Score = 31.1 bits (67), Expect = 0.81
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -2

Query: 232 DSEVRVTRGCGWVRHEKDC 176
           D E+R   GCGW+RHE  C
Sbjct: 351 DRELRPVWGCGWIRHEVLC 369


>01_04_0143 +
           16689471-16689498,16689687-16689818,16689974-16690013,
           16690214-16690280,16690349-16690431,16690755-16690821,
           16692741-16692821,16693696-16693791,16694172-16694198
          Length = 206

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -2

Query: 445 ILLCAVNKSTAVQCYYCNSANNSA 374
           IL C +N S+ V  + C+ ANNSA
Sbjct: 85  ILTCTINGSSLVMIWCCHLANNSA 108


>10_07_0196 + 13978647-13979142,13979242-13980542
          Length = 598

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -2

Query: 442 LLCAVNKSTAVQCYYCNSANNSA-CIDLAK 356
           L+CA ++S      YC+S NN A C DL K
Sbjct: 76  LVCAAHRSEISSLAYCSSHNNLAQCDDLCK 105


>02_01_0325 -
           2208480-2208674,2208772-2210609,2210980-2211109,
           2211231-2211270,2211409-2211531,2211940-2212030,
           2212396-2212480,2212565-2212720,2212797-2212853,
           2212940-2213110,2213313-2213330,2213479-2213551,
           2213754-2213839,2214348-2214466,2214542-2214641
          Length = 1093

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -2

Query: 436 CAVNKSTAVQCYYCNSANNSACIDLAKLDDETRSRVIPI-VNCETAIP 296
           C+ + STA   ++  S  N  CI+  +L   T   +IP  ++  TA P
Sbjct: 790 CSTSPSTANGNHFTQSTKNRHCINTERLPPSTAPMLIPTSIDAVTATP 837


>11_01_0593 -
           4705565-4705822,4705916-4706065,4706160-4706307,
           4706400-4706479,4706573-4706739,4706830-4707078,
           4707161-4707733,4707833-4707972,4708064-4708185,
           4708622-4708743,4708877-4709105
          Length = 745

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 303 PYHSLSLRTSSAERSYRRFSTPI 235
           PYHS S  T +  RSYR+  T +
Sbjct: 198 PYHSASTMTETPRRSYRKLLTSV 220


>03_02_0143 - 5888005-5888088,5888818-5888949,5889485-5889634,
            5890540-5890710,5890840-5891007,5891139-5891234,
            5891777-5891839,5891949-5892114,5892207-5892274,
            5892646-5892789,5893111-5893176,5893329-5893520,
            5894567-5894657,5895241-5895329,5895521-5895583,
            5895698-5895823,5895902-5895991,5896059-5896181,
            5896503-5896619,5896704-5896904,5897643-5897723,
            5897897-5897977,5898083-5898184,5898264-5898488,
            5898571-5898726,5898798-5899010,5899306-5899455,
            5900082-5900204,5900299-5900364,5900555-5900620,
            5900686-5900817,5900891-5900965,5901355-5901438,
            5901516-5901668,5901741-5901806,5902044-5902205,
            5902272-5902388,5902495-5902566,5902702-5902761,
            5902869-5902985,5904131-5904430,5904518-5904622,
            5905710-5905775,5905853-5906297,5906399-5906567,
            5906684-5906736,5906819-5906925
          Length = 1981

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 148  LGDRCYQLYSNLSHDEPIRNLASHVLRNPDRS 243
            LG++ YQ     SH  PI+  A HVL + D +
Sbjct: 1268 LGNKTYQDLYRFSHFNPIQTQAFHVLYHSDNN 1299


>02_05_1264 +
           35321972-35322448,35323022-35323252,35323903-35324565,
           35324698-35324806,35324965-35325383
          Length = 632

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = -2

Query: 250 IFHSYRDSEVRVTRGCGWVRHEKDCYKADNSDHLETVCQCF 128
           +FHS R  + + T    WV HE     AD +  L  VC+ F
Sbjct: 131 VFHSGRAPKGQRTN---WVMHEYRLLDADGTQDLHVVCRIF 168


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,607,757
Number of Sequences: 37544
Number of extensions: 290277
Number of successful extensions: 727
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)