Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_L14
(659 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88168-6|AAC24401.1| 127|Caenorhabditis elegans Hypothetical pr... 37 0.015
U88168-7|AAC24396.2| 132|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z74038-7|CAE17835.1| 132|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z83226-3|CAD21645.1| 218|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF324053-1|AAK01414.1| 218|Caenorhabditis elegans Ly-6-related ... 29 2.2
AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo... 29 3.9
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo... 29 3.9
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo... 29 3.9
Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical p... 28 5.1
Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z81136-3|CAD27610.1| 196|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z74027-2|CAA98420.1| 210|Caenorhabditis elegans Hypothetical pr... 28 5.1
AF324058-1|AAK01419.1| 210|Caenorhabditis elegans Ly-6-related ... 28 5.1
AF324055-1|AAK01416.1| 151|Caenorhabditis elegans Ly-6-related ... 28 5.1
AF039052-2|AAF98629.1| 400|Caenorhabditis elegans Hypothetical ... 28 5.1
Z81076-12|CAB03061.2| 161|Caenorhabditis elegans Hypothetical p... 28 6.8
>U88168-6|AAC24401.1| 127|Caenorhabditis elegans Hypothetical
protein K11H12.7 protein.
Length = 127
Score = 36.7 bits (81), Expect = 0.015
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 3/136 (2%)
Frame = -2
Query: 460 FLVVTILLCAVNKSTAVQCYYCNSANNSACIDLAKLDDETRSRVIPIVNCETAIPQPVAQ 281
FL+V L AV S A+ CY CNS N C+ + E +++ P+ ++ +
Sbjct: 3 FLIVFASLFAV--SAALNCYICNSLNQPECVH----NYEKFNKICPV---KSFGGMKSVK 53
Query: 280 DFFCRKIIQTIFHSYRDSEVRVTRGCGWVRHEKDCYKADNSDHL---ETVCQCFNDHCNS 110
CR + Y E + R C + +D + N L QC + CNS
Sbjct: 54 PLGCR-----VSRQYVKEETSIVRECAYT--GEDIERKSNKGSLGVSRVYSQCSENLCNS 106
Query: 109 ADSADPAAATVLFLIL 62
A+S+ +F+ +
Sbjct: 107 AESSTHFLTAAVFIAI 122
>U88168-7|AAC24396.2| 132|Caenorhabditis elegans Hypothetical
protein K11H12.6 protein.
Length = 132
Score = 33.1 bits (72), Expect = 0.18
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 7/130 (5%)
Frame = -2
Query: 463 LFLVVTILLCAVNKSTAVQCYYCNSANNSACIDLAKLDDETRSRVIPIVNC-ETAIPQPV 287
LF+V L S + CY CNS CID + + + + P+ + + +PV
Sbjct: 3 LFIVFAPLFAV---SAPLNCYICNSKKQPDCID----NYQAFNTICPVRSLGGVKLHEPV 55
Query: 286 AQDFFCRKIIQTIFHSYRDSEVRVTRGCGWVRHEKDCYKADNSDHLE---TVC---QCFN 125
CR + Y ++ + R CG++ E++ K + + +L C QC
Sbjct: 56 G----CR-----VTRQYSKEKMWIIRECGYLGEERE-RKFNTTTYLNGEPATCVFSQCSE 105
Query: 124 DHCNSADSAD 95
+ CNSA+S++
Sbjct: 106 NLCNSAESSN 115
>Z74038-7|CAE17835.1| 132|Caenorhabditis elegans Hypothetical
protein F58B4.6 protein.
Length = 132
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/56 (21%), Positives = 28/56 (50%)
Frame = -2
Query: 214 TRGCGWVRHEKDCYKADNSDHLETVCQCFNDHCNSADSADPAAATVLFLILAACMY 47
T G + +C+ + + C C+ D CNS+ S P +++L ++++ ++
Sbjct: 76 TTQLGATQAPANCFNTTSGSSVMGTCCCYGDGCNSSPSMLPLGSSILAVMISMFIF 131
>Z83226-3|CAD21645.1| 218|Caenorhabditis elegans Hypothetical
protein F43D2.4 protein.
Length = 218
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 142 VCQCFNDHCNSADSADPAAATVLFLILAA 56
VC C+ DHCN +A + L+L A
Sbjct: 187 VCTCYADHCNGNSAASSLSIVSALLVLIA 215
>AF324053-1|AAK01414.1| 218|Caenorhabditis elegans Ly-6-related
protein HOT-1 protein.
Length = 218
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 142 VCQCFNDHCNSADSADPAAATVLFLILAA 56
VC C+ DHCN +A + L+L A
Sbjct: 187 VCTCYADHCNGNSAASSLSIVSALLVLIA 215
>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-5 protein.
Length = 2238
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -2
Query: 439 LCAVNKSTAVQCYYCNSANNSACIDLAKLDDETRSRVIPIVNCETAIPQPVAQ 281
L A NK+ VQC + N + K++ +S ++ IV A P+P+ +
Sbjct: 1647 LAAANKTAIVQCLIDKRSPNPIELAAMKMNRRMKSEMLKIVK-NAAFPRPIKE 1698
>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform a protein.
Length = 2276
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -2
Query: 439 LCAVNKSTAVQCYYCNSANNSACIDLAKLDDETRSRVIPIVNCETAIPQPVAQ 281
L A NK+ VQC + N + K++ +S ++ IV A P+P+ +
Sbjct: 1685 LAAANKTAIVQCLIDKRSPNPIELAAMKMNRRMKSEMLKIVK-NAAFPRPIKE 1736
>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform b protein.
Length = 2238
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -2
Query: 439 LCAVNKSTAVQCYYCNSANNSACIDLAKLDDETRSRVIPIVNCETAIPQPVAQ 281
L A NK+ VQC + N + K++ +S ++ IV A P+P+ +
Sbjct: 1647 LAAANKTAIVQCLIDKRSPNPIELAAMKMNRRMKSEMLKIVK-NAAFPRPIKE 1698
>Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical
protein R11A5.1b protein.
Length = 896
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 185 LMTNPSATSRHTYFGIPIGVENRLYDLSAEEVLSDRLWYGGLTVH 319
++T +H F +P G + + LS E++ +R GGL H
Sbjct: 784 ILTRDDGHEKHFRFEVPYGEQVQPIRLSPEDISKERSRLGGLNRH 828
>Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical
protein R11A5.1a protein.
Length = 906
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 185 LMTNPSATSRHTYFGIPIGVENRLYDLSAEEVLSDRLWYGGLTVH 319
++T +H F +P G + + LS E++ +R GGL H
Sbjct: 794 ILTRDDGHEKHFRFEVPYGEQVQPIRLSPEDISKERSRLGGLNRH 838
>Z81136-3|CAD27610.1| 196|Caenorhabditis elegans Hypothetical
protein W02B8.5 protein.
Length = 196
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -2
Query: 181 DCYKADNSDHLET-VCQCFNDHCNSADSADPAAATVLFLILAA 56
D + +++D VC C D CNSA S + + IL A
Sbjct: 148 DLFSHEHADSQRIRVCSCLGDRCNSAISTSNCQSLSVLAILVA 190
>Z74027-2|CAA98420.1| 210|Caenorhabditis elegans Hypothetical
protein C13G3.2 protein.
Length = 210
Score = 28.3 bits (60), Expect = 5.1
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = -2
Query: 313 CETAIPQPVAQDFFCRKIIQTIF-HSYRDSEVRVTRGCGWVRHEKDCYKADNSDHLETVC 137
C T P F R + I HS R E GC +R + D++ VC
Sbjct: 85 CVTLFPNLPDSTFVVRGCFENILRHSRRAEEQLQQDGCYLLRSLPMYSNTVSMDYV--VC 142
Query: 136 QCFNDHCNSAD 104
C D+CN+ +
Sbjct: 143 TCNGDYCNTME 153
>AF324058-1|AAK01419.1| 210|Caenorhabditis elegans Ly-6-related
protein HOT-6 protein.
Length = 210
Score = 28.3 bits (60), Expect = 5.1
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = -2
Query: 313 CETAIPQPVAQDFFCRKIIQTIF-HSYRDSEVRVTRGCGWVRHEKDCYKADNSDHLETVC 137
C T P F R + I HS R E GC +R + D++ VC
Sbjct: 85 CVTLFPNLPDSTFVVRGCFENILRHSRRAEEQLQQDGCYLLRSLPMYSNTVSMDYV--VC 142
Query: 136 QCFNDHCNSAD 104
C D+CN+ +
Sbjct: 143 TCNGDYCNTME 153
>AF324055-1|AAK01416.1| 151|Caenorhabditis elegans Ly-6-related
protein HOT-3 protein.
Length = 151
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -2
Query: 181 DCYKADNSDHLET-VCQCFNDHCNSADSADPAAATVLFLILAA 56
D + +++D VC C D CNSA S + + IL A
Sbjct: 103 DLFSHEHADSQRIRVCSCLGDRCNSAISTSNCQSLSVLAILVA 145
>AF039052-2|AAF98629.1| 400|Caenorhabditis elegans Hypothetical
protein T22D1.8 protein.
Length = 400
Score = 28.3 bits (60), Expect = 5.1
Identities = 23/82 (28%), Positives = 35/82 (42%)
Frame = -2
Query: 541 LISEVDTTGN*SFIVNIRFEKMRMDGLFLVVTILLCAVNKSTAVQCYYCNSANNSACIDL 362
L+ T GN S F + R DG L ++S ++ Y C SA +AC+D+
Sbjct: 257 LLDAYFTRGNCSKTDFYFFPENRTDGF----VNCLYTRSRSLSIPVYSCRSARYAACMDI 312
Query: 361 AKLDDETRSRVIPIVNCETAIP 296
D + +P T+IP
Sbjct: 313 R--DPSVSTTTVPPPVSSTSIP 332
>Z81076-12|CAB03061.2| 161|Caenorhabditis elegans Hypothetical
protein F35C5.11 protein.
Length = 161
Score = 27.9 bits (59), Expect = 6.8
Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 20/162 (12%)
Frame = -2
Query: 472 MDGLFLVVTILLCAVNKSTAVQCYYCNSANNS---ACIDLAKLDDETRSRVIPIVNCE-T 305
M +F + IL + + A++C+ C A A LAKL+ S +C+ T
Sbjct: 1 MKQIFQFLIILAFITSSAYAIKCHQCGGAEKIPKFAKNALAKLNISVDSLY---GDCKKT 57
Query: 304 AIPQPVAQDFFCRKIIQTIFHSYRDSEVR---VTRGCGWVRHEKD------CYK---ADN 161
+ + FC K + Y ++ T+GC +R + D CY+ N
Sbjct: 58 SGSDMCSNGTFCLKRAKVYQIGYSGVNLKWTTYTKGCATLREDNDQIPTNTCYELGQVSN 117
Query: 160 SDHLETV---CQCFNDHCNSADS-ADPAAATVLFLILAACMY 47
S C C D CNS + T+LF++ Y
Sbjct: 118 SSGYTAKRMDCYCQKDFCNSTTNLGGSLIMTILFVLSIFVQY 159
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,731,162
Number of Sequences: 27780
Number of extensions: 265997
Number of successful extensions: 869
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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